STRBP 13029

Name: STRBP	Sequence: fasta or formatted (672aa)		NCBI GI: 21361745
Description: spermatid perinuclear RNA binding protein		Referenced in: RNA Editing and Other RNA Modifications Testes and Sperm Zinc Finger Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.7 52 2 C cysteine 1.8 12 1 D aspartate 5.5 37 2 E glutamate 6.4 43 2 F phenylalanine 2.1 14 2 G glycine 7.4 50 2 H histidine 1.6 11 1 I isoleucine 4.2 28 3 K lysine 8.8 59 4 L leucine 9.8 66 2 M methionine 3.0 20 1 N asparagine 4.5 30 2 P proline 6.0 40 2 Q glutamine 3.1 21 2 R arginine 4.9 33 2 S serine 7.1 48 2 T threonine 6.2 42 2 V valine 6.5 44 2 W tryptophan 0.7 5 1 Y tyrosine 2.5 17 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 spermatid perinuclear RNA binding protein ILF3 0.531 interleukin enhancer binding factor 3 isoform e [Ho... ILF3 0.531 interleukin enhancer binding factor 3 isoform d [Ho... ILF3 0.529 interleukin enhancer binding factor 3 isoform c [Hom... ILF3 0.529 interleukin enhancer binding factor 3 isoform b [Hom... ILF3 0.529 interleukin enhancer binding factor 3 isoform a [Hom... ZFR 0.252 zinc finger RNA binding protein ZFR2 0.228 zinc finger RNA binding protein 2 isoform 1 ADARB1 0.107 RNA-specific adenosine deaminase B1 isoform 7 [Homo... ADARB1 0.107 RNA-specific adenosine deaminase B1 isoform 3 ADARB1 0.107 RNA-specific adenosine deaminase B1 isoform 2 ADARB1 0.107 RNA-specific adenosine deaminase B1 isoform 1 ADARB2 0.073 adenosine deaminase, RNA-specific, B2 ILF2 0.056 interleukin enhancer binding factor 2 ADAR 0.033 adenosine deaminase, RNA-specific isoform c ADAR 0.031 adenosine deaminase, RNA-specific isoform d ADAR 0.031 adenosine deaminase, RNA-specific isoform b ADAR 0.031 adenosine deaminase, RNA-specific isoform a TARBP2 0.027 TAR RNA binding protein 2 isoform b TARBP2 0.027 TAR RNA binding protein 2 isoform a TARBP2 0.027 TAR RNA binding protein 2 isoform b STAU2 0.025 staufen homolog 2 STAU1 0.024 staufen isoform a STAU1 0.024 staufen isoform b STAU1 0.024 staufen isoform a STAU1 0.024 staufen isoform a STAU1 0.023 staufen isoform c EIF2AK2 0.017 eukaryotic translation initiation factor 2-alpha ki... EIF2AK2 0.017 eukaryotic translation initiation factor 2-alpha ki... EIF2AK2 0.017 eukaryotic translation initiation factor 2-alpha kina... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.