Guide to the Human Genome
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Name: ILF3 Sequence: fasta or formatted (706aa) NCBI GI: 212549555
Description:

interleukin enhancer binding factor 3 isoform e

Referenced in:

Interleukins and Their Receptors
RNA Editing and Other RNA Modifications
Translation Factors
Zinc Finger Proteins

Other entries for this name:
alt prot [898aa] interleukin enhancer binding factor 3 isoform d
alt prot [894aa] interleukin enhancer binding factor 3 isoform a
alt prot [702aa] interleukin enhancer binding factor 3 isoform b
alt prot [690aa] interleukin enhancer binding factor 3 isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.5         67           2
 C cysteine            1.1          8           1
 D aspartate           5.5         39           2
 E glutamate           7.5         53           2
 F phenylalanine       2.1         15           2
 G glycine             9.1         64           2
 H histidine           2.4         17           1
 I isoleucine          3.0         21           1
 K lysine              8.2         58           5
 L leucine             8.5         60           3
 M methionine          3.3         23           1
 N asparagine          3.4         24           1
 P proline             7.4         52           4
 Q glutamine           3.5         25           2
 R arginine            5.1         36           2
 S serine              5.9         42           2
 T threonine           4.7         33           2
 V valine              7.1         50           2
 W tryptophan          0.6          4           1
 Y tyrosine            2.1         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   interleukin enhancer binding factor 3 isoform e [Ho... 
ILF3                  0.990   interleukin enhancer binding factor 3 isoform b [Hom...
ILF3                  0.978   interleukin enhancer binding factor 3 isoform d [Ho...
ILF3                  0.968   interleukin enhancer binding factor 3 isoform a [Hom...
ILF3                  0.966   interleukin enhancer binding factor 3 isoform c [Hom...
STRBP                 0.503   spermatid perinuclear RNA binding protein 
ZFR                   0.245   zinc finger RNA binding protein 
ZFR2                  0.227   zinc finger RNA binding protein 2 isoform 1 
ADARB1                0.103   RNA-specific adenosine deaminase B1 isoform 7 [Homo...
ADARB1                0.103   RNA-specific adenosine deaminase B1 isoform 3 
ADARB1                0.103   RNA-specific adenosine deaminase B1 isoform 2 
ADARB1                0.103   RNA-specific adenosine deaminase B1 isoform 1 
ADARB2                0.074   adenosine deaminase, RNA-specific, B2 
ILF2                  0.055   interleukin enhancer binding factor 2 
STAU2                 0.029   staufen homolog 2 
ADAR                  0.027   adenosine deaminase, RNA-specific isoform c 
ADAR                  0.027   adenosine deaminase, RNA-specific isoform d 
ADAR                  0.027   adenosine deaminase, RNA-specific isoform b 
ADAR                  0.027   adenosine deaminase, RNA-specific isoform a 
STAU1                 0.025   staufen isoform a 
STAU1                 0.025   staufen isoform b 
STAU1                 0.025   staufen isoform a 
STAU1                 0.025   staufen isoform a 
TARBP2                0.024   TAR RNA binding protein 2 isoform b 
TARBP2                0.024   TAR RNA binding protein 2 isoform a 
TARBP2                0.024   TAR RNA binding protein 2 isoform b 
STAU1                 0.023   staufen isoform c 
EIF2AK2               0.016   eukaryotic translation initiation factor 2-alpha ki...
EIF2AK2               0.016   eukaryotic translation initiation factor 2-alpha ki...
EIF2AK2               0.016   eukaryotic translation initiation factor 2-alpha kina...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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