SMARCD3 12761

Name: SMARCD3	Sequence: fasta or formatted (470aa)		NCBI GI: 21264353
Description: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 isoform 1		Referenced in: Nonhistone Chromosomal Proteins
Other entries for this name: alt prot [483aa] SWI/SNF related, matrix associated, actin dependent regulator of ... alt mRNA [470aa] SWI/SNF related, matrix associated, actin dependent regulator of ...
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.2 29 2 C cysteine 0.9 4 1 D aspartate 6.6 31 2 E glutamate 5.5 26 3 F phenylalanine 3.2 15 2 G glycine 4.5 21 1 H histidine 1.9 9 1 I isoleucine 4.5 21 1 K lysine 6.6 31 2 L leucine 9.6 45 3 M methionine 3.0 14 1 N asparagine 2.1 10 1 P proline 8.9 42 3 Q glutamine 8.3 39 2 R arginine 8.1 38 2 S serine 7.7 36 2 T threonine 3.8 18 2 V valine 5.1 24 2 W tryptophan 0.9 4 1 Y tyrosine 2.8 13 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 SWI/SNF related, matrix associated, actin dependent ... SMARCD3 1.000 SWI/SNF related, matrix associated, actin dependent ... SMARCD3 0.971 SWI/SNF related, matrix associated, actin dependent ... SMARCD1 0.733 SWI/SNF-related matrix-associated actin-dependent r... SMARCD2 0.702 SWI/SNF-related matrix-associated actin-dependent r... SMARCD2 0.700 SWI/SNF-related matrix-associated actin-dependent r... SMARCD1 0.644 SWI/SNF-related matrix-associated actin-dependent r... YLPM1 0.020 YLP motif containing 1 COL27A1 0.020 collagen, type XXVII, alpha 1 RAPH1 0.017 Ras association and pleckstrin homology domains 1 is... MED15 0.016 mediator complex subunit 15 isoform a MED15 0.016 mediator complex subunit 15 isoform b SCARA3 0.016 scavenger receptor class A, member 3 isoform 1 [Homo... ZC3H18 0.016 zinc finger CCCH-type containing 18 WBP11 0.016 WW domain binding protein 11 COL8A2 0.015 collagen, type VIII, alpha 2 TACC2 0.015 transforming, acidic coiled-coil containing protein... ZNF207 0.015 zinc finger protein 207 isoform a OGFR 0.015 opioid growth factor receptor VASP 0.015 vasodilator-stimulated phosphoprotein TAF4 0.015 TBP-associated factor 4 MIXL1 0.015 Mix-like homeobox protein 1 LOC645249 0.014 PREDICTED: hypothetical protein LOC645249 0.014 PREDICTED: hypothetical protein LOC645249 0.014 PREDICTED: hypothetical protein PRB1 0.014 proline-rich protein BstNI subfamily 1 isoform 1 pre... LOC389333 0.014 hypothetical protein LOC389333 CUX1 0.014 cut-like homeobox 1 isoform a FLJ37078 0.014 hypothetical protein LOC222183 PRB2 0.014 proline-rich protein BstNI subfamily 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.