Guide to the Human Genome
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Name: ZNF844 Sequence: fasta or formatted (666aa) NCBI GI: 211058421
Description:

zinc finger protein 844

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.4         16           1
 C cysteine            4.8         32           1
 D aspartate           2.7         18           2
 E glutamate           8.1         54           2
 F phenylalanine       4.4         29           2
 G glycine             4.8         32           1
 H histidine           4.7         31           1
 I isoleucine          3.5         23           2
 K lysine              9.8         65           2
 L leucine             7.8         52           2
 M methionine          4.1         27           1
 N asparagine          5.4         36           2
 P proline             6.0         40           1
 Q glutamine           3.3         22           2
 R arginine            5.6         37           2
 S serine              7.7         51           2
 T threonine           6.0         40           1
 V valine              5.6         37           2
 W tryptophan          0.5          3           1
 Y tyrosine            3.2         21           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 844 
ZNF440                0.394   zinc finger protein 440 
ZNF433                0.375   zinc finger protein 433 
ZNF763                0.365   zinc finger protein 440 like 
ZNF20                 0.352   zinc finger protein 20 
ZNF700                0.344   zinc finger protein 700 
ZNF439                0.343   zinc finger protein 439 
ZNF627                0.320   zinc finger protein 627 
ZNF443                0.315   zinc finger protein 443 
ZNF563                0.311   zinc finger protein 563 
ZNF799                0.307   zinc finger protein 799 
ZNF136                0.305   zinc finger protein 136 
ZNF564                0.303   zinc finger protein 564 
LOC100290283          0.299   PREDICTED: hypothetical protein XP_002347961 
ZNF823                0.297   ZFP-36 for a zinc finger protein 
ZNF442                0.296   zinc finger protein 442 
ZNF709                0.296   zinc finger protein 709 isoform a 
ZNF490                0.295   zinc finger protein 490 
ZNF791                0.294   zinc finger protein 791 
LOC729747             0.288   similar to zinc finger protein 709 
ZNF44                 0.286   zinc finger protein 44 
ZNF14                 0.283   zinc finger protein 14 
LOC100292533          0.281   PREDICTED: similar to zinc finger protein 564 [Homo...
LOC100290363          0.279   PREDICTED: hypothetical protein XP_002347962 
LOC100287841          0.279   PREDICTED: hypothetical protein XP_002343682 
ZNF625                0.275   zinc finger protein 625 
ZNF669                0.270   zinc finger protein 669 isoform 2 
ZNF670                0.270   zinc finger protein 670 
ZNF669                0.269   zinc finger protein 669 isoform 1 
ZNF491                0.267   zinc finger protein 491 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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