Guide to the Human Genome
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Name: ZNF136 Sequence: fasta or formatted (540aa) NCBI GI: 4507987
Description:

zinc finger protein 136

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.1         17           1
 C cysteine            6.1         33           1
 D aspartate           2.6         14           1
 E glutamate           8.0         43           2
 F phenylalanine       5.4         29           2
 G glycine             7.2         39           2
 H histidine           7.4         40           2
 I isoleucine          4.3         23           2
 K lysine             10.4         56           2
 L leucine             4.1         22           2
 M methionine          2.0         11           1
 N asparagine          1.9         10           1
 P proline             4.8         26           2
 Q glutamine           3.5         19           1
 R arginine            7.0         38           2
 S serine              8.3         45           4
 T threonine           6.1         33           1
 V valine              2.8         15           1
 W tryptophan          0.9          5           1
 Y tyrosine            4.1         22           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 136 
LOC100290283          0.660   PREDICTED: hypothetical protein XP_002347961 
ZNF564                0.607   zinc finger protein 564 
ZNF709                0.573   zinc finger protein 709 isoform a 
ZNF791                0.554   zinc finger protein 791 
ZNF14                 0.553   zinc finger protein 14 
ZNF433                0.552   zinc finger protein 433 
ZNF442                0.548   zinc finger protein 442 
ZNF443                0.541   zinc finger protein 443 
ZNF44                 0.539   zinc finger protein 44 
LOC100292533          0.529   PREDICTED: similar to zinc finger protein 564 [Homo...
ZNF799                0.529   zinc finger protein 799 
ZNF441                0.529   zinc finger protein 441 
ZNF823                0.529   ZFP-36 for a zinc finger protein 
ZNF627                0.528   zinc finger protein 627 
LOC100290363          0.528   PREDICTED: hypothetical protein XP_002347962 
LOC100287841          0.528   PREDICTED: hypothetical protein XP_002343682 
LOC729747             0.526   similar to zinc finger protein 709 
ZNF709                0.526   zinc finger protein 709 isoform b 
ZNF700                0.524   zinc finger protein 700 
ZNF20                 0.522   zinc finger protein 20 
ZNF490                0.486   zinc finger protein 490 
ZNF563                0.474   zinc finger protein 563 
ZNF555                0.468   zinc finger protein 555 
ZNF440                0.455   zinc finger protein 440 
ZNF439                0.452   zinc finger protein 439 
ZNF491                0.451   zinc finger protein 491 
ZNF699                0.441   zinc finger protein 699 
ZNF99                 0.412   zinc finger protein 99 
ZNF57                 0.411   zinc finger protein 57 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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