Guide to the Human Genome
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Search of human proteins with 21040371

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|21040371 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 [Homo
sapiens]
         (427 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|21040371 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 [Homo sapi...   850   0.0  
gi|4758112 HLA-B associated transcript 1 [Homo sapiens]               780   0.0  
gi|18375623 HLA-B associated transcript 1 [Homo sapiens]              780   0.0  
gi|83700235 eukaryotic translation initiation factor 4A2 [Homo s...   259   3e-69
gi|4503529 eukaryotic translation initiation factor 4A isoform 1...   254   1e-67
gi|7661920 eukaryotic translation initiation factor 4A, isoform ...   246   4e-65
gi|164664518 DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 [Homo sapi...   245   6e-65
gi|14251212 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 [Homo sapi...   229   5e-60
gi|20149629 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1 ...   210   2e-54
gi|6005743 DEAD (Asp-Glu-Ala-As) box polypeptide 19 isoform 1 [H...   208   9e-54
gi|8922886 DDX19-like protein [Homo sapiens]                          204   9e-53
gi|62241022 DEAD (Asp-Glu-Ala-As) box polypeptide 19 isoform 3 [...   196   4e-50
gi|224593278 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Homo sap...   193   3e-49
gi|31542656 DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Homo sapi...   193   3e-49
gi|41327771 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Homo sapi...   190   2e-48
gi|62241024 DEAD (Asp-Glu-Ala-As) box polypeptide 19 isoform 2 [...   187   2e-47
gi|164419732 DEAD (Asp-Glu-Ala-Asp) box polypeptide 25 [Homo sap...   186   3e-47
gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo sapi...   184   1e-46
gi|188035877 DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 [Homo sap...   181   1e-45
gi|21071032 DEAD-box protein abstrakt [Homo sapiens]                  178   7e-45
gi|87196351 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3 [Homo...   171   2e-42
gi|169881239 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked ...   170   3e-42
gi|13514809 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked [...   170   3e-42
gi|41327776 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 2 ...   169   4e-42
gi|45446747 DEAD box polypeptide 42 protein [Homo sapiens]            164   1e-40
gi|45446743 DEAD box polypeptide 42 protein [Homo sapiens]            164   1e-40
gi|148613856 DEAD box polypeptide 17 isoform 3 [Homo sapiens]         163   2e-40
gi|38201710 DEAD box polypeptide 17 isoform 1 [Homo sapiens]          163   2e-40
gi|222352149 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 [Homo sap...   163   3e-40
gi|209862869 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 3 ...   163   3e-40

>gi|21040371 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 [Homo
           sapiens]
          Length = 427

 Score =  850 bits (2197), Expect = 0.0
 Identities = 427/427 (100%), Positives = 427/427 (100%)

Query: 1   MAEQDVENDLLDYDEEEEPQAPQESTPAPPKKDIKGSYVSIHSSGFRDFLLKPELLRAIV 60
           MAEQDVENDLLDYDEEEEPQAPQESTPAPPKKDIKGSYVSIHSSGFRDFLLKPELLRAIV
Sbjct: 1   MAEQDVENDLLDYDEEEEPQAPQESTPAPPKKDIKGSYVSIHSSGFRDFLLKPELLRAIV 60

Query: 61  DCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCH 120
           DCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCH
Sbjct: 61  DCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCH 120

Query: 121 TRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVR 180
           TRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVR
Sbjct: 121 TRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVR 180

Query: 181 NRSFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKDIRPVCRK 240
           NRSFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKDIRPVCRK
Sbjct: 181 NRSFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKDIRPVCRK 240

Query: 241 FMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVIIFVKSVQRCM 300
           FMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVIIFVKSVQRCM
Sbjct: 241 FMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVIIFVKSVQRCM 300

Query: 301 ALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN 360
           ALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
Sbjct: 301 ALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN 360

Query: 361 YDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNVAELPEEIDIS 420
           YDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNVAELPEEIDIS
Sbjct: 361 YDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNVAELPEEIDIS 420

Query: 421 TYIEQSR 427
           TYIEQSR
Sbjct: 421 TYIEQSR 427


>gi|4758112 HLA-B associated transcript 1 [Homo sapiens]
          Length = 428

 Score =  780 bits (2014), Expect = 0.0
 Identities = 384/428 (89%), Positives = 412/428 (96%), Gaps = 1/428 (0%)

Query: 1   MAEQDVENDLLDYDEEE-EPQAPQESTPAPPKKDIKGSYVSIHSSGFRDFLLKPELLRAI 59
           MAE DV+N+LLDY+++E E  A  +   AP KKD+KGSYVSIHSSGFRDFLLKPELLRAI
Sbjct: 1   MAENDVDNELLDYEDDEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAI 60

Query: 60  VDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMC 119
           VDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ+EPV GQV+VLVMC
Sbjct: 61  VDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMC 120

Query: 120 HTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALV 179
           HTRELAFQISKEYERFSKYMP+VKV+VFFGGLSIKKDEEVLKKNCPH+VVGTPGRILAL 
Sbjct: 121 HTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALA 180

Query: 180 RNRSFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKDIRPVCR 239
           RN+S +LK++KHF+LDECDKMLEQLDMRRDVQEIFR+TPHEKQ MMFSATLSK+IRPVCR
Sbjct: 181 RNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCR 240

Query: 240 KFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVIIFVKSVQRC 299
           KFMQDPME+FVDDETKLTLHGLQQYYVKLKD+EKNRKLFDLLDVLEFNQV+IFVKSVQRC
Sbjct: 241 KFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRC 300

Query: 300 MALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVF 359
           +ALAQLLVEQNFPAIAIHRGM QEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNI F
Sbjct: 301 IALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAF 360

Query: 360 NYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNVAELPEEIDI 419
           NYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVN++ELP+EIDI
Sbjct: 361 NYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDI 420

Query: 420 STYIEQSR 427
           S+YIEQ+R
Sbjct: 421 SSYIEQTR 428


>gi|18375623 HLA-B associated transcript 1 [Homo sapiens]
          Length = 428

 Score =  780 bits (2014), Expect = 0.0
 Identities = 384/428 (89%), Positives = 412/428 (96%), Gaps = 1/428 (0%)

Query: 1   MAEQDVENDLLDYDEEE-EPQAPQESTPAPPKKDIKGSYVSIHSSGFRDFLLKPELLRAI 59
           MAE DV+N+LLDY+++E E  A  +   AP KKD+KGSYVSIHSSGFRDFLLKPELLRAI
Sbjct: 1   MAENDVDNELLDYEDDEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAI 60

Query: 60  VDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMC 119
           VDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ+EPV GQV+VLVMC
Sbjct: 61  VDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMC 120

Query: 120 HTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALV 179
           HTRELAFQISKEYERFSKYMP+VKV+VFFGGLSIKKDEEVLKKNCPH+VVGTPGRILAL 
Sbjct: 121 HTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALA 180

Query: 180 RNRSFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKDIRPVCR 239
           RN+S +LK++KHF+LDECDKMLEQLDMRRDVQEIFR+TPHEKQ MMFSATLSK+IRPVCR
Sbjct: 181 RNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCR 240

Query: 240 KFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVIIFVKSVQRC 299
           KFMQDPME+FVDDETKLTLHGLQQYYVKLKD+EKNRKLFDLLDVLEFNQV+IFVKSVQRC
Sbjct: 241 KFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRC 300

Query: 300 MALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVF 359
           +ALAQLLVEQNFPAIAIHRGM QEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNI F
Sbjct: 301 IALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAF 360

Query: 360 NYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNVAELPEEIDI 419
           NYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVN++ELP+EIDI
Sbjct: 361 NYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDI 420

Query: 420 STYIEQSR 427
           S+YIEQ+R
Sbjct: 421 SSYIEQTR 428


>gi|83700235 eukaryotic translation initiation factor 4A2 [Homo
           sapiens]
          Length = 407

 Score =  259 bits (662), Expect = 3e-69
 Identities = 143/373 (38%), Positives = 221/373 (59%), Gaps = 5/373 (1%)

Query: 46  FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ 105
           F D  LK  LLR I   GFE PS +Q   I   I G DV+ QA+SG GKTA F ++ LQQ
Sbjct: 35  FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQ 94

Query: 106 IEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCP 165
           +E    +   LV+  TRELA QI K       YM +       GG +++ + + L+   P
Sbjct: 95  LEIEFKETQALVLAPTRELAQQIQKVILALGDYMGAT-CHACIGGTNVRNEMQKLQAEAP 153

Query: 166 HVVVGTPGRILALVRNRSFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMM 225
           H+VVGTPGR+  ++  R  S K +K FVLDE D+ML +   +  + EIF+      Q ++
Sbjct: 154 HIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSR-GFKDQIYEIFQKLNTSIQVVL 212

Query: 226 FSATLSKDIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSE-KNRKLFDLLDVL 284
            SAT+  D+  V +KFM+DP+ + V  E +LTL G++Q+Y+ ++  E K   L DL + L
Sbjct: 213 LSATMPTDVLEVTKKFMRDPIRILVKKE-ELTLEGIKQFYINVEREEWKLDTLCDLYETL 271

Query: 285 EFNQVIIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATN 344
              Q +IF+ + ++   L + +  ++F   A+H  M Q+ER    ++F+    R+L+ T+
Sbjct: 272 TITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTD 331

Query: 345 LFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQD 404
           L  RG+D+++V++V NYD+P + + Y+HR+ R GRFG KG+AI FV++E D +IL D++ 
Sbjct: 332 LLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEE-DKRILRDIET 390

Query: 405 RFEVNVAELPEEI 417
            +   V E+P  +
Sbjct: 391 FYNTTVEEMPMNV 403


>gi|4503529 eukaryotic translation initiation factor 4A isoform 1
           [Homo sapiens]
          Length = 406

 Score =  254 bits (648), Expect = 1e-67
 Identities = 142/386 (36%), Positives = 224/386 (58%), Gaps = 6/386 (1%)

Query: 30  PKKDIKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAK 89
           P+  I+ ++  I  S F D  L   LLR I   GFE PS +Q   I   I G DV+ QA+
Sbjct: 19  PEGVIESNWNEIVDS-FDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQ 77

Query: 90  SGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFG 149
           SG GKTA F ++ LQQIE        LV+  TRELA QI K       YM         G
Sbjct: 78  SGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYM-GASCHACIG 136

Query: 150 GLSIKKDEEVLKKNCPHVVVGTPGRILALVRNRSFSLKNVKHFVLDECDKMLEQLDMRRD 209
           G +++ + + L+   PH++VGTPGR+  ++  R  S K +K FVLDE D+ML +   +  
Sbjct: 137 GTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSR-GFKDQ 195

Query: 210 VQEIFRLTPHEKQCMMFSATLSKDIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLK 269
           + +IF+      Q ++ SAT+  D+  V +KFM+DP+ + V  E +LTL G++Q+Y+ ++
Sbjct: 196 IYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKE-ELTLEGIRQFYINVE 254

Query: 270 DSE-KNRKLFDLLDVLEFNQVIIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSR 328
             E K   L DL + L   Q +IF+ + ++   L + +  ++F   A+H  M Q+ER   
Sbjct: 255 REEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVI 314

Query: 329 YQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAIT 388
            ++F+    R+L+ T+L  RG+D+++V++V NYD+P + + Y+HR+ R GRFG KG+AI 
Sbjct: 315 MREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAIN 374

Query: 389 FVSDENDAKILNDVQDRFEVNVAELP 414
            V++E D + L D++  +  ++ E+P
Sbjct: 375 MVTEE-DKRTLRDIETFYNTSIEEMP 399


>gi|7661920 eukaryotic translation initiation factor 4A, isoform 3
           [Homo sapiens]
          Length = 411

 Score =  246 bits (627), Expect = 4e-65
 Identities = 133/368 (36%), Positives = 218/368 (59%), Gaps = 6/368 (1%)

Query: 51  LKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVN 110
           L+ +LLR I   GFE PS +Q   I Q I G DV+ Q++SG GKTA F ++ LQ ++   
Sbjct: 45  LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQV 104

Query: 111 GQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVG 170
            +   L++  TRELA QI K       YM +V+     GG ++ +D   L     HVV G
Sbjct: 105 RETQALILAPTRELAVQIQKGLLALGDYM-NVQCHACIGGTNVGEDIRKLDYG-QHVVAG 162

Query: 171 TPGRILALVRNRSFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATL 230
           TPGR+  ++R RS   + +K  VLDE D+ML +   +  + +++R  P   Q ++ SATL
Sbjct: 163 TPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNK-GFKEQIYDVYRYLPPATQVVLISATL 221

Query: 231 SKDIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSE-KNRKLFDLLDVLEFNQV 289
             +I  +  KFM DP+ + V  + +LTL G++Q++V ++  E K   L DL D L   Q 
Sbjct: 222 PHEILEMTNKFMTDPIRILVKRD-ELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQA 280

Query: 290 IIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRG 349
           +IF  + ++   L + + E NF   ++H  M Q+ER S  ++F+    R+L++T+++ RG
Sbjct: 281 VIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARG 340

Query: 350 MDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVN 409
           +D+ +V+++ NYD+P + + Y+HR+ R+GR+G KG+AI FV ++ D +IL D++  +   
Sbjct: 341 LDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKND-DIRILRDIEQYYSTQ 399

Query: 410 VAELPEEI 417
           + E+P  +
Sbjct: 400 IDEMPMNV 407


>gi|164664518 DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 [Homo
           sapiens]
          Length = 483

 Score =  245 bits (625), Expect = 6e-65
 Identities = 141/399 (35%), Positives = 227/399 (56%), Gaps = 8/399 (2%)

Query: 30  PKKDIK---GSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLC 86
           P KD++       S   + F D+ LK ELL  I + G+E PS +Q E IP A+ G D+L 
Sbjct: 79  PPKDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILA 138

Query: 87  QAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSV 146
           +AK+G GK+  +++  L++++     +  +V+  TRELA Q+S+   + SK+M   KV  
Sbjct: 139 RAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMA 198

Query: 147 FFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVRNRSFSLKNVKHFVLDECDKMLEQLDM 206
             GG +++ D+ +   +  HVV+ TPGRIL L++     + +V+  VLDE DK+L Q D 
Sbjct: 199 TTGGTNLR-DDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQ-DF 256

Query: 207 RRDVQEIFRLTPHEKQCMMFSATLSKDIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYV 266
            + +++I    P  +Q +++SAT    ++      +Q P E+ + +E  LTL G+ QYY 
Sbjct: 257 VQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINLMEE--LTLKGVTQYYA 314

Query: 267 KLKDSEKNRKLFDLLDVLEFNQVIIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERL 326
            + + +K   L  L   L+ NQ IIF  S QR   LA+ + +  +    IH  M QE R 
Sbjct: 315 YVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRN 374

Query: 327 SRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLA 386
             +  F++   R LV T+LF RG+DI+ VN+V N+D P+ ++TYLHR+ R+GRFG  GLA
Sbjct: 375 RVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLA 434

Query: 387 ITFVSDENDAKILNDVQDRFEVNVAELPEEIDISTYIEQ 425
           I  ++  +D   L  ++++    +  +P  ID S Y+ +
Sbjct: 435 INLIT-YDDRFNLKSIEEQLGTEIKPIPSNIDKSLYVAE 472


>gi|14251212 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 [Homo
           sapiens]
          Length = 824

 Score =  229 bits (583), Expect = 5e-60
 Identities = 134/390 (34%), Positives = 205/390 (52%), Gaps = 11/390 (2%)

Query: 36  GSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKT 95
           G  +    + F   LL   +L  +   GFE PS VQ + IP    G+D++ QAKSG GKT
Sbjct: 54  GDVLLAEPADFESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKT 113

Query: 96  AVFVLATLQQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKK 155
            VF    L  +   N    +L++  TRE+A QI          M  ++  VF GG  + +
Sbjct: 114 CVFSTIALDSLVLENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQ 173

Query: 156 DEEVLKKNCPHVVVGTPGRILALVRNRSFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFR 215
           D+  LKK C H+ VG+PGRI  L+     +  +++ F+LDE DK+LE+   +  +  I+ 
Sbjct: 174 DKTRLKK-C-HIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYS 231

Query: 216 LTPHEKQCMMFSATLSKDIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKD----- 270
             P  KQ +  SAT  + +     K+M+DP  V ++     +L GL+QYY  +       
Sbjct: 232 SLPASKQMLAVSATYPEFLANALTKYMRDPTFVRLNSSDP-SLIGLKQYYKVVNSYPLAH 290

Query: 271 ---SEKNRKLFDLLDVLEFNQVIIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLS 327
               EK + L +L   + FNQ ++F     R   LA +L  + FPA  I   M Q +RL 
Sbjct: 291 KVFEEKTQHLQELFSRIPFNQALVFSNLHSRAQHLADILSSKGFPAECISGNMNQNQRLD 350

Query: 328 RYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAI 387
              + K F  R+L++T+L  RG+D E+VN+V N D+P D +TY+HR+ RAGRFGT GL +
Sbjct: 351 AMAKLKHFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLTV 410

Query: 388 TFVSDENDAKILNDVQDRFEVNVAELPEEI 417
           T+     +  ++  +  +  +N+  LP+ I
Sbjct: 411 TYCCRGEEENMMMRIAQKCNINLLPLPDPI 440


>gi|20149629 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1
           [Homo sapiens]
          Length = 455

 Score =  210 bits (535), Expect = 2e-54
 Identities = 123/374 (32%), Positives = 209/374 (55%), Gaps = 6/374 (1%)

Query: 46  FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ 105
           F+D  +   L  A    G+  P+++Q E IP A+ G D++  A++G GKT  F L  L  
Sbjct: 26  FKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNA 85

Query: 106 IEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCP 165
           +     ++  LV+  TRELAFQIS+++E     +  V+ +V  GG+        L K  P
Sbjct: 86  LLETPQRLFALVLTPTRELAFQISEQFEALGSSI-GVQSAVIVGGIDSMSQSLALAKK-P 143

Query: 166 HVVVGTPGRILALVRN-RSFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCM 224
           H+++ TPGR++  + N + F+L+ +K+ V+DE D++L  +D   +V +I ++ P +++  
Sbjct: 144 HIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILN-MDFETEVDKILKVIPRDRKTF 202

Query: 225 MFSATLSKDIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVL 284
           +FSAT++K ++ + R  +++P++  V  + + T+  LQQYY+ +    K+  L  +L+ L
Sbjct: 203 LFSATMTKKVQKLQRAALKNPVKCAVSSKYQ-TVEKLQQYYIFIPSKFKDTYLVYILNEL 261

Query: 285 EFNQVIIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATN 344
             N  +IF  +       A LL    F AI +H  M+Q +RL    +FK   R IL+AT+
Sbjct: 262 AGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATD 321

Query: 345 LFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQD 404
           +  RG+DI  V++V N+D+P  S  Y+HRV R  R G  G AITFV+ + D ++   ++ 
Sbjct: 322 VASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVT-QYDVELFQRIEH 380

Query: 405 RFEVNVAELPEEID 418
                +   P + D
Sbjct: 381 LIGKKLPGFPTQDD 394


>gi|6005743 DEAD (Asp-Glu-Ala-As) box polypeptide 19 isoform 1 [Homo
           sapiens]
          Length = 479

 Score =  208 bits (529), Expect = 9e-54
 Identities = 123/378 (32%), Positives = 202/378 (53%), Gaps = 15/378 (3%)

Query: 46  FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILG--MDVLCQAKSGMGKTAVFVLATL 103
           F +  LKP+LL+ +   GF  PS++Q   +P  +     +++ Q++SG GKTA FVLA L
Sbjct: 94  FEELRLKPQLLQGVYAMGFNRPSKIQENALPLMLAEPPQNLIAQSQSGTGKTAAFVLAML 153

Query: 104 QQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKN 163
            Q+EP N     L +  T ELA Q  K  E+  K+ P +K++    G  +++ +++ ++ 
Sbjct: 154 SQVEPANKYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKISEQ- 212

Query: 164 CPHVVVGTPGRILALVRNRSF-SLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQ 222
              +V+GTPG +L       F   K +K FVLDE D M+     +     I R+ P   Q
Sbjct: 213 ---IVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQ 269

Query: 223 CMMFSATLSKDIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKD-SEKNRKLFDLL 281
            ++FSAT    +    +K + DP  + +  E + TL  ++QYYV      EK + L +L 
Sbjct: 270 MLLFSATFEDSVWKFAQKVVPDPNVIKLKREEE-TLDTIKQYYVLCSSRDEKFQALCNLY 328

Query: 282 DVLEFNQVIIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILV 341
             +   Q +IF  + +    LA  L ++      +   M  E+R +  ++F++ + ++LV
Sbjct: 329 GAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLV 388

Query: 342 ATNLFGRGMDIERVNIVFNYDMPEDSD------TYLHRVARAGRFGTKGLAITFVSDEND 395
            TN+  RG+D+E+V++V N+D+P D D      TYLHR+ R GRFG +GLA+  V  ++ 
Sbjct: 389 TTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHS 448

Query: 396 AKILNDVQDRFEVNVAEL 413
             ILN +Q+ F   +  L
Sbjct: 449 MNILNRIQEHFNKKIERL 466


>gi|8922886 DDX19-like protein [Homo sapiens]
          Length = 478

 Score =  204 bits (520), Expect = 9e-53
 Identities = 121/378 (32%), Positives = 202/378 (53%), Gaps = 15/378 (3%)

Query: 46  FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILG--MDVLCQAKSGMGKTAVFVLATL 103
           F +  LKP+LL+ +   GF  PS++Q   +P  +     +++ Q++SG GKTA FVLA L
Sbjct: 93  FEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAML 152

Query: 104 QQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKN 163
            ++EP +     L +  T ELA Q  K  E+  K+ P +K++    G  +++ +++ ++ 
Sbjct: 153 SRVEPSDRYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKISEQ- 211

Query: 164 CPHVVVGTPGRILALVRNRSF-SLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQ 222
              +V+GTPG +L       F   K +K FVLDE D M+     +     I R+ P   Q
Sbjct: 212 ---IVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQ 268

Query: 223 CMMFSATLSKDIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKD-SEKNRKLFDLL 281
            ++FSAT    +    +K + DP  + +  E + TL  ++QYYV      EK + L +L 
Sbjct: 269 MLLFSATFEDSVWKFAQKVVPDPNVIKLKREEE-TLDTIKQYYVLCSSRDEKFQALCNLY 327

Query: 282 DVLEFNQVIIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILV 341
             +   Q +IF  + +    LA  L ++      +   M  E+R +  ++F++ + ++LV
Sbjct: 328 GAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLV 387

Query: 342 ATNLFGRGMDIERVNIVFNYDMPEDSD------TYLHRVARAGRFGTKGLAITFVSDEND 395
            TN+  RG+D+E+V++V N+D+P D D      TYLHR+ R GRFG +GLA+  V  ++ 
Sbjct: 388 TTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHS 447

Query: 396 AKILNDVQDRFEVNVAEL 413
             ILN +Q+ F   +  L
Sbjct: 448 MNILNRIQEHFNKKIERL 465


>gi|62241022 DEAD (Asp-Glu-Ala-As) box polypeptide 19 isoform 3
           [Homo sapiens]
          Length = 370

 Score =  196 bits (497), Expect = 4e-50
 Identities = 117/361 (32%), Positives = 192/361 (53%), Gaps = 15/361 (4%)

Query: 63  GFEHPSEVQHECIPQAILG--MDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCH 120
           GF  PS++Q   +P  +     +++ Q++SG GKTA FVLA L Q+EP N     L +  
Sbjct: 2   GFNRPSKIQENALPLMLAEPPQNLIAQSQSGTGKTAAFVLAMLSQVEPANKYPQCLCLSP 61

Query: 121 TRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVR 180
           T ELA Q  K  E+  K+ P +K++    G  +++ +++ ++    +V+GTPG +L    
Sbjct: 62  TYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKISEQ----IVIGTPGTVLDWCS 117

Query: 181 NRSF-SLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKDIRPVCR 239
              F   K +K FVLDE D M+     +     I R+ P   Q ++FSAT    +    +
Sbjct: 118 KLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQ 177

Query: 240 KFMQDPMEVFVDDETKLTLHGLQQYYVKLKD-SEKNRKLFDLLDVLEFNQVIIFVKSVQR 298
           K + DP  + +  E + TL  ++QYYV      EK + L +L   +   Q +IF  + + 
Sbjct: 178 KVVPDPNVIKLKREEE-TLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKT 236

Query: 299 CMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIV 358
              LA  L ++      +   M  E+R +  ++F++ + ++LV TN+  RG+D+E+V++V
Sbjct: 237 ASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVV 296

Query: 359 FNYDMPEDSD------TYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNVAE 412
            N+D+P D D      TYLHR+ R GRFG +GLA+  V  ++   ILN +Q+ F   +  
Sbjct: 297 INFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIER 356

Query: 413 L 413
           L
Sbjct: 357 L 357


>gi|224593278 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Homo
           sapiens]
          Length = 796

 Score =  193 bits (490), Expect = 3e-49
 Identities = 118/381 (30%), Positives = 213/381 (55%), Gaps = 14/381 (3%)

Query: 46  FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ 105
           F+D  L   LL+AI   GF+ P+ +Q  CIP  +LG D+   A +G GKTA F L  L++
Sbjct: 220 FQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLER 279

Query: 106 I--EPVNGQVT-VLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKK 162
           +  +P    VT VLV+  TREL  Q+     + +++  ++   +  GGL +K  E  L+ 
Sbjct: 280 LIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQFC-NITTCLAVGGLDVKSQEAALRA 338

Query: 163 NCPHVVVGTPGRILALVRN-RSFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEK 221
             P +++ TPGR++  + N  SF L +++  +LDE D+ML++      ++EI R+  H +
Sbjct: 339 -APDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEY-FEEQMKEIIRMCSHHR 396

Query: 222 QCMMFSATLSKDIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLK---DSEKNRKLF 278
           Q M+FSAT++ +++ +    +++P+ +FV+  T +    L+Q +++++   + ++   + 
Sbjct: 397 QTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPF-LRQEFIRIRPNREGDREAIVA 455

Query: 279 DLLDVLEFNQVIIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRR 338
            LL     + V++F ++ ++   +  LL         +H  ++Q +RL   ++FKD Q  
Sbjct: 456 ALLTRTFTDHVMLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQRLEALRRFKDEQID 515

Query: 339 ILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKI 398
           ILVAT++  RG+DIE V  V N+ MP     Y+HRV R  R G  G +++ V  E++ K+
Sbjct: 516 ILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRAGRSVSLVG-EDERKM 574

Query: 399 LNDV--QDRFEVNVAELPEEI 417
           L ++    +  V    LP+++
Sbjct: 575 LKEIVKAAKAPVKARILPQDV 595


>gi|31542656 DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Homo
           sapiens]
          Length = 483

 Score =  193 bits (490), Expect = 3e-49
 Identities = 127/391 (32%), Positives = 211/391 (53%), Gaps = 14/391 (3%)

Query: 44  SGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATL 103
           +GF +  L   L+      G + P+ VQ  CIP  + G D L  AK+G GKTA FVL  L
Sbjct: 2   AGFAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPIL 61

Query: 104 QQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKN 163
           Q++      +  LV+  TRELA+QI++++    K +  +K  +  GG+ +      L + 
Sbjct: 62  QKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPL-GLKDCIIVGGMDMVAQALELSRK 120

Query: 164 CPHVVVGTPGRILALVRN-RSFSLKNVKHFVLDECDKMLEQ--LDMRRDVQEIFRLTPHE 220
            PHVV+ TPGR+   +R+  +FS+K ++  V+DE D++LEQ   D   D++ I    P  
Sbjct: 121 -PHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRLLEQGCTDFTVDLEAILAAVPAR 179

Query: 221 KQCMMFSATLSKDIRPVCRKFMQDPMEVFVDDETKL-TLHGLQQYYVKLKDSEKNRKLFD 279
           +Q ++FSATL+  +R +       P   F + +  + T+  L Q Y+ + +  K+  L  
Sbjct: 180 RQTLLFSATLTDTLRELQGLATNQPF--FWEAQAPVSTVEQLDQRYLLVPEKVKDAYLVH 237

Query: 280 LL----DVLEFNQVIIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDF 335
           L+    D  E   +IIF  + + C  L  +L + +FP +A+H  M Q+ER +   +FK  
Sbjct: 238 LIQRFQDEHEDWSIIIFTNTCKTCQILCMMLRKFSFPTVALHSMMKQKERFAALAKFKSS 297

Query: 336 QRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEND 395
             RIL+AT++  RG+DI  V +V N++ P     Y+HRV R  R G +G AIT V+ + D
Sbjct: 298 IYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVT-QYD 356

Query: 396 AKILNDVQDRFEVNVAELP-EEIDISTYIEQ 425
             +++ ++++ +  + E   EE ++   + Q
Sbjct: 357 IHLVHAIEEQIKKKLEEFSVEEAEVLQILTQ 387


>gi|41327771 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Homo
           sapiens]
          Length = 820

 Score =  190 bits (483), Expect = 2e-48
 Identities = 125/418 (29%), Positives = 210/418 (50%), Gaps = 39/418 (9%)

Query: 35  KGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGK 94
           KG  +      ++D  L P +L  I  CG++ P+ +Q + IP  +   D++  A++G GK
Sbjct: 382 KGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGK 441

Query: 95  TAVFVLATL---------QQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVS 145
           TA F++  L          +IE  +     +++  TRELA QI +E  +F K +  ++  
Sbjct: 442 TAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPL-GIRTV 500

Query: 146 VFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVRNRSFSLKNVKHFVLDECDKMLEQLD 205
              GG+S +     L+  C  +V+ TPGR++ ++ NR   L    + VLDE D+M++ + 
Sbjct: 501 AVIGGISREDQGFRLRMGC-EIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMID-MG 558

Query: 206 MRRDVQEIFRLTP-------------------------HE-KQCMMFSATLSKDIRPVCR 239
              DVQ+I    P                         H+ +Q +MF+AT+   +  + R
Sbjct: 559 FEPDVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLAR 618

Query: 240 KFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVIIFVKSVQRC 299
            +++ P  V++    K     ++Q    + +SEK +KL  +L+      +IIFV   + C
Sbjct: 619 SYLRRPAVVYIGSAGK-PHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGC 677

Query: 300 MALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVF 359
             LA+ L +  + A  +H G  QE+R       K   + ILVAT++ GRG+DI+ V++V 
Sbjct: 678 DVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVV 737

Query: 360 NYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNVAELPEEI 417
           NYDM ++ + Y+HR+ R GR G  G+AITF++ E+ A      Q   E  V+  P E+
Sbjct: 738 NYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILESPVSSCPPEL 795


>gi|62241024 DEAD (Asp-Glu-Ala-As) box polypeptide 19 isoform 2
           [Homo sapiens]
          Length = 448

 Score =  187 bits (475), Expect = 2e-47
 Identities = 112/342 (32%), Positives = 183/342 (53%), Gaps = 13/342 (3%)

Query: 80  LGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKYM 139
           L  +++ Q++SG GKTA FVLA L Q+EP N     L +  T ELA Q  K  E+  K+ 
Sbjct: 99  LPQNLIAQSQSGTGKTAAFVLAMLSQVEPANKYPQCLCLSPTYELALQTGKVIEQMGKFY 158

Query: 140 PSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVRNRSF-SLKNVKHFVLDECD 198
           P +K++    G  +++ +++ ++    +V+GTPG +L       F   K +K FVLDE D
Sbjct: 159 PELKLAYAVRGNKLERGQKISEQ----IVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEAD 214

Query: 199 KMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKDIRPVCRKFMQDPMEVFVDDETKLTL 258
            M+     +     I R+ P   Q ++FSAT    +    +K + DP  + +  E + TL
Sbjct: 215 VMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKREEE-TL 273

Query: 259 HGLQQYYVKLKD-SEKNRKLFDLLDVLEFNQVIIFVKSVQRCMALAQLLVEQNFPAIAIH 317
             ++QYYV      EK + L +L   +   Q +IF  + +    LA  L ++      + 
Sbjct: 274 DTIKQYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLS 333

Query: 318 RGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSD------TYL 371
             M  E+R +  ++F++ + ++LV TN+  RG+D+E+V++V N+D+P D D      TYL
Sbjct: 334 GEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYL 393

Query: 372 HRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNVAEL 413
           HR+ R GRFG +GLA+  V  ++   ILN +Q+ F   +  L
Sbjct: 394 HRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERL 435


>gi|164419732 DEAD (Asp-Glu-Ala-Asp) box polypeptide 25 [Homo
           sapiens]
          Length = 483

 Score =  186 bits (472), Expect = 3e-47
 Identities = 116/381 (30%), Positives = 198/381 (51%), Gaps = 16/381 (4%)

Query: 46  FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILG--MDVLCQAKSGMGKTAVFVLATL 103
           F +  LK ELL+ I   GF  PS++Q   +P  +     +++ Q++SG GKTA FVLA L
Sbjct: 99  FEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAML 158

Query: 104 QQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKN 163
            ++  +      L +  T ELA Q  +  E+  K+   V+V     G  I +  ++ K+ 
Sbjct: 159 SRVNALELFPQCLCLAPTYELALQTGRVVEQMGKFCVDVQVMYAIRGNRIPRGTDITKQ- 217

Query: 164 CPHVVVGTPGRILA-LVRNRSFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQ 222
              +++GTPG +L    + +   L  ++ FVLDE D M++          I R  P E Q
Sbjct: 218 ---IIIGTPGTVLDWCFKLKLIDLTKIRVFVLDEADVMIDTQGFSDHSIRIQRALPSECQ 274

Query: 223 CMMFSATLSKDIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKD-SEKNRKLFDLL 281
            ++FSAT    +     + + DP  + +  E +LTL+ ++QYYV  +   +K + L ++ 
Sbjct: 275 MLLFSATFEDSVWHFAERIIPDPNVIKLRKE-ELTLNNIRQYYVLCEHRKDKYQALCNIY 333

Query: 282 DVLEFNQVIIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILV 341
             +   Q IIF ++ +    L   +++       +   +  E+R S  Q+F+D + ++L+
Sbjct: 334 GSITIGQAIIFCQTRRNAKWLTVEMIQDGHQVSLLSGELTVEQRASIIQRFRDGKEKVLI 393

Query: 342 ATNLFGRGMDIERVNIVFNYDMP------EDSDTYLHRVARAGRFGTKGLAITFVSDEND 395
            TN+  RG+D+++V IV N+D+P       D +TYLHR+ R GRFG KGLA   + + ++
Sbjct: 394 TTNVCARGIDVKQVTIVVNFDLPVKQGEEPDYETYLHRIGRTGRFGKKGLAFNMI-EVDE 452

Query: 396 AKILNDVQDRFEVNVAELPEE 416
              L  +QD F  ++ +L  E
Sbjct: 453 LPSLMKIQDHFNSSIKQLNAE 473


>gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo
           sapiens]
          Length = 1031

 Score =  184 bits (467), Expect = 1e-46
 Identities = 119/375 (31%), Positives = 205/375 (54%), Gaps = 16/375 (4%)

Query: 54  ELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQI------E 107
           ++L ++   G+E P+ +Q + IP  + G D++  AK+G GKT  F+L   + I      E
Sbjct: 382 KILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLE 441

Query: 108 PVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHV 167
              G + V +M  TRELA QI+KE ++FSK +  ++V   +GG  I +    LK+    +
Sbjct: 442 EGEGPIAV-IMTPTRELALQITKECKKFSKTL-GLRVVCVYGGTGISEQIAELKRGA-EI 498

Query: 168 VVGTPGRI---LALVRNRSFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCM 224
           +V TPGR+   LA    R  +L+ V + VLDE D+M + +     V  I      ++Q +
Sbjct: 499 IVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFD-MGFEPQVMRIVDNVRPDRQTV 557

Query: 225 MFSATLSKDIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLD-V 283
           MFSAT  + +  + R+ +  P+EV V   + +    ++Q  + +++ +K  KL +LL   
Sbjct: 558 MFSATFPRAMEALARRILSKPIEVQVGGRS-VVCSDVEQQVIVIEEEKKFLKLLELLGHY 616

Query: 284 LEFNQVIIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVAT 343
            E   VIIFV   +    L + L+  ++P +++H G+ Q +R S    FK+   ++LVAT
Sbjct: 617 QESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVAT 676

Query: 344 NLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQ 403
           ++  RG+D++ + +V NY  P   + Y+HR  R GR G KG A TF++ E+ A+   D+ 
Sbjct: 677 SVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFIT-EDQARYAGDII 735

Query: 404 DRFEVNVAELPEEID 418
              E++   +P +++
Sbjct: 736 KALELSGTAVPPDLE 750


>gi|188035877 DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 [Homo
           sapiens]
          Length = 619

 Score =  181 bits (459), Expect = 1e-45
 Identities = 114/383 (29%), Positives = 206/383 (53%), Gaps = 16/383 (4%)

Query: 53  PELLRA-IVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNG 111
           PE+L   +   G+E P+ +Q + IP  +LG D+L  A +G GKTA F+L  + +    + 
Sbjct: 211 PEVLNHNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVIMRALFESK 270

Query: 112 QVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGT 171
             + L++  TRELA QI ++ +     +P +K  +  GGL +      L+++   V++ T
Sbjct: 271 TPSALILTPTRELAIQIERQAKELMSGLPRMKTVLLVGGLPLPPQLYRLQQHVK-VIIAT 329

Query: 172 PGRILALVRNRSFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLS 231
           PGR+L +++  S  L  VK  V+DE D ML+ +  ++ V +I    P++ Q ++ SAT+ 
Sbjct: 330 PGRLLDIIKQSSVELCGVKIVVVDEADTMLK-MGFQQQVLDILENIPNDCQTILVSATIP 388

Query: 232 KDIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQ--V 289
             I  +  + + +P+ + +  E  L    ++Q  + ++D  K +KLF++L+  +  +  V
Sbjct: 389 TSIEQLASQLLHNPVRI-ITGEKNLPCANVRQIILWVEDPAKKKKLFEILNDKKLFKPPV 447

Query: 290 IIFVKSVQRCMALAQLLVEQ-----NFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATN 344
           ++FV     C   A LL E         +I+IH   +Q ER +  +   +    ++V+T 
Sbjct: 448 LVFVD----CKLGADLLSEAVQKITGLKSISIHSEKSQIERKNILKGLLEGDYEVVVSTG 503

Query: 345 LFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQD 404
           + GRG+D+  V +V N+DMP   D Y+H++ R GR G  G AITF+++ N  ++  D+  
Sbjct: 504 VLGRGLDLISVRLVVNFDMPSSMDEYVHQIGRVGRLGQNGTAITFINN-NSKRLFWDIAK 562

Query: 405 RFEVNVAELPEEIDISTYIEQSR 427
           R +   + LP ++  S Y+   +
Sbjct: 563 RVKPTGSILPPQLLNSPYLHDQK 585


>gi|21071032 DEAD-box protein abstrakt [Homo sapiens]
          Length = 622

 Score =  178 bits (452), Expect = 7e-45
 Identities = 111/386 (28%), Positives = 203/386 (52%), Gaps = 23/386 (5%)

Query: 34  IKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMG 93
           ++G  +      F++      +LR +   G  HP+ +Q + IP  + G D++  A +G G
Sbjct: 171 VEGDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSG 230

Query: 94  KTAVFVLATLQQIEPVNGQVTV--------LVMCHTRELAFQISKEYERFSKYM-----P 140
           KT VF L  +        ++          L++C +RELA Q     E + + +     P
Sbjct: 231 KTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSP 290

Query: 141 SVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVRNRSFSLKNVKHFVLDECDKM 200
            ++ ++  GG+S+K+  E ++    H++V TPGR++ L++ +  SL   ++  LDE D+M
Sbjct: 291 LLRCALCIGGMSVKEQMETIRHGV-HMMVATPGRLMDLLQKKMVSLDICRYLALDEADRM 349

Query: 201 LEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKDIRPVCRKFMQDPMEVFVDDETKLTLHG 260
           ++ +    D++ IF     ++Q ++FSAT+ K I+   +  +  P+ + V      +L  
Sbjct: 350 ID-MGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDV 408

Query: 261 LQQY-YVKLKDSEKNRKLFDLLDVLEFNQ--VIIFVKSVQRCMALAQLLVEQNFPAIAIH 317
           +Q+  YVK     +  K+  LL+ L+     V+IF +      A+ + L+ +   A+AIH
Sbjct: 409 IQEVEYVK-----EEAKMVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIH 463

Query: 318 RGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARA 377
            G  QEER    + F++ ++ +LVAT++  +G+D   +  V NYDMPE+ + Y+HR+ R 
Sbjct: 464 GGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRT 523

Query: 378 GRFGTKGLAITFVSDENDAKILNDVQ 403
           GR G  G+A TF++   D  +L D++
Sbjct: 524 GRSGNTGIATTFINKACDESVLMDLK 549


>gi|87196351 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3 [Homo
           sapiens]
          Length = 662

 Score =  171 bits (432), Expect = 2e-42
 Identities = 124/403 (30%), Positives = 199/403 (49%), Gaps = 26/403 (6%)

Query: 42  HSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLA 101
           H   F D  +   ++  I    +  P+ VQ   IP      D++  A++G GKTA F+L 
Sbjct: 178 HIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLP 237

Query: 102 TLQQIEP-----------VNGQV-------TVLVMCHTRELAFQISKEYERFSKYMPSVK 143
            L QI              NG+          LV+  TRELA QI +E  +FS Y   V+
Sbjct: 238 ILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFS-YRSRVR 296

Query: 144 VSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVRNRSFSLKNVKHFVLDECDKMLE- 202
             V +GG  I +    L++ C H++V TPGR++ ++      L   K+ VLDE D+ML+ 
Sbjct: 297 PCVVYGGADIGQQIRDLERGC-HLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDM 355

Query: 203 --QLDMRRDVQEIFRLTPHEKQCMMFSATLSKDIRPVCRKFMQDPMEVFVDDETKLTLHG 260
             +  +RR V++        +  MMFSAT  K+I+ + R F+ + + + V      T   
Sbjct: 356 GFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVG-RVGSTSEN 414

Query: 261 LQQYYVKLKDSEKNRKLFDLLDVLEFNQV-IIFVKSVQRCMALAQLLVEQNFPAIAIHRG 319
           + Q  V +++S+K   L DLL+    + + ++FV++ +   +L   L  + +   +IH  
Sbjct: 415 ITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGD 474

Query: 320 MAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGR 379
            +Q +R     QF+  +  ILVAT +  RG+DI  V  V N+D+P D + Y+HR+ R GR
Sbjct: 475 RSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGR 534

Query: 380 FGTKGLAITFVSDENDAKILNDVQDRFEVNVAELPEEIDISTY 422
            G  GLA +F ++ N   I  D+ D       E+P  ++   Y
Sbjct: 535 VGNLGLATSFFNERN-INITKDLLDLLVEAKQEVPSWLENMAY 576


>gi|169881239 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked
           [Homo sapiens]
          Length = 660

 Score =  170 bits (430), Expect = 3e-42
 Identities = 125/409 (30%), Positives = 200/409 (48%), Gaps = 26/409 (6%)

Query: 36  GSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKT 95
           GS    H   F D  +   ++  I    +  P+ VQ   IP      D++  A++G GKT
Sbjct: 170 GSNCPPHIENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKT 229

Query: 96  AVFVLATLQQIEP-----------VNGQV-------TVLVMCHTRELAFQISKEYERFSK 137
           A F+L  L QI              NG+          LV+  TRELA QI +E  +FS 
Sbjct: 230 AAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFS- 288

Query: 138 YMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVRNRSFSLKNVKHFVLDEC 197
           Y   V+  V +GG  I +    L++ C H++V TPGR++ ++      L   K+ VLDE 
Sbjct: 289 YRSRVRPCVVYGGADIGQQIRDLERGC-HLLVATPGRLVDMMERGKIGLDFCKYLVLDEA 347

Query: 198 DKMLE---QLDMRRDVQEIFRLTPHEKQCMMFSATLSKDIRPVCRKFMQDPMEVFVDDET 254
           D+ML+   +  +RR V++        +  MMFSAT  K+I+ + R F+ + + + V    
Sbjct: 348 DRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVG-RV 406

Query: 255 KLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQV-IIFVKSVQRCMALAQLLVEQNFPA 313
             T   + Q  V ++D +K   L D+L     + + ++FV++ +   +L   L  + +  
Sbjct: 407 GSTSENITQKVVWVEDLDKRSFLLDILGATGSDSLTLVFVETKKGADSLEDFLYHEGYAC 466

Query: 314 IAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHR 373
            +IH   +Q +R     QF+  +  ILVAT +  RG+DI  V  V N+D+P D + Y+HR
Sbjct: 467 TSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVRHVINFDLPSDIEEYVHR 526

Query: 374 VARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNVAELPEEIDISTY 422
           + R GR G  GLA +F +++N   I  D+ D       E+P  ++   Y
Sbjct: 527 IGRTGRVGNLGLATSFFNEKN-MNITKDLLDLLVEAKQEVPSWLENMAY 574


>gi|13514809 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked
           [Homo sapiens]
          Length = 660

 Score =  170 bits (430), Expect = 3e-42
 Identities = 125/409 (30%), Positives = 200/409 (48%), Gaps = 26/409 (6%)

Query: 36  GSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKT 95
           GS    H   F D  +   ++  I    +  P+ VQ   IP      D++  A++G GKT
Sbjct: 170 GSNCPPHIENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKT 229

Query: 96  AVFVLATLQQIEP-----------VNGQV-------TVLVMCHTRELAFQISKEYERFSK 137
           A F+L  L QI              NG+          LV+  TRELA QI +E  +FS 
Sbjct: 230 AAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFS- 288

Query: 138 YMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVRNRSFSLKNVKHFVLDEC 197
           Y   V+  V +GG  I +    L++ C H++V TPGR++ ++      L   K+ VLDE 
Sbjct: 289 YRSRVRPCVVYGGADIGQQIRDLERGC-HLLVATPGRLVDMMERGKIGLDFCKYLVLDEA 347

Query: 198 DKMLE---QLDMRRDVQEIFRLTPHEKQCMMFSATLSKDIRPVCRKFMQDPMEVFVDDET 254
           D+ML+   +  +RR V++        +  MMFSAT  K+I+ + R F+ + + + V    
Sbjct: 348 DRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVG-RV 406

Query: 255 KLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQV-IIFVKSVQRCMALAQLLVEQNFPA 313
             T   + Q  V ++D +K   L D+L     + + ++FV++ +   +L   L  + +  
Sbjct: 407 GSTSENITQKVVWVEDLDKRSFLLDILGATGSDSLTLVFVETKKGADSLEDFLYHEGYAC 466

Query: 314 IAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHR 373
            +IH   +Q +R     QF+  +  ILVAT +  RG+DI  V  V N+D+P D + Y+HR
Sbjct: 467 TSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVRHVINFDLPSDIEEYVHR 526

Query: 374 VARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNVAELPEEIDISTY 422
           + R GR G  GLA +F +++N   I  D+ D       E+P  ++   Y
Sbjct: 527 IGRTGRVGNLGLATSFFNEKN-MNITKDLLDLLVEAKQEVPSWLENMAY 574


>gi|41327776 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 2
           [Homo sapiens]
          Length = 406

 Score =  169 bits (428), Expect = 4e-42
 Identities = 108/374 (28%), Positives = 189/374 (50%), Gaps = 55/374 (14%)

Query: 46  FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ 105
           F+D  +   L  A    G+  P+++Q E IP A+ G D++  A++G GKT  F L  L  
Sbjct: 26  FKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNA 85

Query: 106 IEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCP 165
           +     ++  LV+  TRELAFQIS+++E     +  V+ +V  GG+        L K  P
Sbjct: 86  LLETPQRLFALVLTPTRELAFQISEQFEALGSSI-GVQSAVIVGGIDSMSQSLALAKK-P 143

Query: 166 HVVVGTPGRILALVRN-RSFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCM 224
           H+++ TPGR++  + N + F+L+ +K+ V+DE D++L  +D   +V +I ++ P +++  
Sbjct: 144 HIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRIL-NMDFETEVDKILKVIPRDRKTF 202

Query: 225 MFSATLSKDIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVL 284
           +FSAT++K ++ + R  +++P++  V  + + T+  LQQYY+ +    K+++L  L    
Sbjct: 203 LFSATMTKKVQKLQRAALKNPVKCAVSSKYQ-TVEKLQQYYIFIPSKFKSKRLGSL---- 257

Query: 285 EFNQVIIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATN 344
                                                         +FK   R IL+AT+
Sbjct: 258 ---------------------------------------------NKFKAKARSILLATD 272

Query: 345 LFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQD 404
           +  RG+DI  V++V N+D+P  S  Y+HRV R  R G  G AITFV+ + D ++   ++ 
Sbjct: 273 VASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVT-QYDVELFQRIEH 331

Query: 405 RFEVNVAELPEEID 418
                +   P + D
Sbjct: 332 LIGKKLPGFPTQDD 345


>gi|45446747 DEAD box polypeptide 42 protein [Homo sapiens]
          Length = 938

 Score =  164 bits (415), Expect = 1e-40
 Identities = 123/406 (30%), Positives = 198/406 (48%), Gaps = 16/406 (3%)

Query: 13  YDEEEEPQ--APQESTPAPPKKDIK--GSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPS 68
           Y+E EE     PQ+      K +++  G+      S F  F    +L+  I    +  P+
Sbjct: 218 YNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPT 277

Query: 69  EVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATL------QQIEPVNGQVTVLVMCHTR 122
            +Q + +P A+ G D++  AK+G GKTA F+   L      +++EP +G + V+V C TR
Sbjct: 278 PIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIV-CPTR 336

Query: 123 ELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVRNR 182
           EL  QI  E +RF K      V+V+ GG S+ +  + L++    +VV TPGR++  V+ +
Sbjct: 337 ELCQQIHAECKRFGKAYNLRSVAVYGGG-SMWEQAKALQEGA-EIVVCTPGRLIDHVKKK 394

Query: 183 SFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKDIRPVCRKFM 242
           + +L+ V + V DE D+M + +     V+ I      ++Q ++FSAT  K I  + R  +
Sbjct: 395 ATNLQRVSYLVFDEADRMFD-MGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDIL 453

Query: 243 QDPMEVFVDDETKLTLHGLQQYYVKLKDSEK-NRKLFDLLDVLEFNQVIIFVKSVQRCMA 301
            DP+ V   D  +      Q   +      K N     L++      V++FV        
Sbjct: 454 IDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEE 513

Query: 302 LAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNY 361
           LA  L ++      +H  M Q ER      FK     +LVAT++  RG+DI  +  V NY
Sbjct: 514 LANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINY 573

Query: 362 DMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFE 407
           D+  D DT+ HR+ R GR G KG+A T ++ + D+    D+    E
Sbjct: 574 DVARDIDTHTHRIGRTGRAGEKGVAYTLLTPK-DSNFAGDLVRNLE 618


>gi|45446743 DEAD box polypeptide 42 protein [Homo sapiens]
          Length = 938

 Score =  164 bits (415), Expect = 1e-40
 Identities = 123/406 (30%), Positives = 198/406 (48%), Gaps = 16/406 (3%)

Query: 13  YDEEEEPQ--APQESTPAPPKKDIK--GSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPS 68
           Y+E EE     PQ+      K +++  G+      S F  F    +L+  I    +  P+
Sbjct: 218 YNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPT 277

Query: 69  EVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATL------QQIEPVNGQVTVLVMCHTR 122
            +Q + +P A+ G D++  AK+G GKTA F+   L      +++EP +G + V+V C TR
Sbjct: 278 PIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIV-CPTR 336

Query: 123 ELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVRNR 182
           EL  QI  E +RF K      V+V+ GG S+ +  + L++    +VV TPGR++  V+ +
Sbjct: 337 ELCQQIHAECKRFGKAYNLRSVAVYGGG-SMWEQAKALQEGA-EIVVCTPGRLIDHVKKK 394

Query: 183 SFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKDIRPVCRKFM 242
           + +L+ V + V DE D+M + +     V+ I      ++Q ++FSAT  K I  + R  +
Sbjct: 395 ATNLQRVSYLVFDEADRMFD-MGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDIL 453

Query: 243 QDPMEVFVDDETKLTLHGLQQYYVKLKDSEK-NRKLFDLLDVLEFNQVIIFVKSVQRCMA 301
            DP+ V   D  +      Q   +      K N     L++      V++FV        
Sbjct: 454 IDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEE 513

Query: 302 LAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNY 361
           LA  L ++      +H  M Q ER      FK     +LVAT++  RG+DI  +  V NY
Sbjct: 514 LANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINY 573

Query: 362 DMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFE 407
           D+  D DT+ HR+ R GR G KG+A T ++ + D+    D+    E
Sbjct: 574 DVARDIDTHTHRIGRTGRAGEKGVAYTLLTPK-DSNFAGDLVRNLE 618


>gi|148613856 DEAD box polypeptide 17 isoform 3 [Homo sapiens]
          Length = 731

 Score =  163 bits (413), Expect = 2e-40
 Identities = 105/364 (28%), Positives = 190/364 (52%), Gaps = 18/364 (4%)

Query: 40  SIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFV 99
           + H + F  +++       ++D  F  P+ +Q +  P A+ G D++  A++G GKT  ++
Sbjct: 172 AFHHANFPQYVMD-----VLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYL 226

Query: 100 LATLQQI------EPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSI 153
           L  +  I      E  +G +  LV+  TRELA Q+ +  + + K    +K +  +GG   
Sbjct: 227 LPAIVHINHQPYLERGDGPIC-LVLAPTRELAQQVQQVADDYGK-CSRLKSTCIYGGAPK 284

Query: 154 KKDEEVLKKNCPHVVVGTPGRILALVRNRSFSLKNVKHFVLDECDKMLEQLDMRRDVQEI 213
                 L++    + + TPGR++  + +   +L+   + VLDE D+ML+ +     +++I
Sbjct: 285 GPQIRDLERGV-EICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLD-MGFEPQIRKI 342

Query: 214 FRLTPHEKQCMMFSATLSKDIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEK 273
                 ++Q +M+SAT  K++R +   F++D  ++ V +      H + Q      +SEK
Sbjct: 343 VDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEK 402

Query: 274 NRKLFDLLDVL---EFNQVIIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQ 330
           + KL  L++ +   + N+ IIFV++ +RC  L + +    +PA+ IH   +Q ER     
Sbjct: 403 DHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLN 462

Query: 331 QFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFV 390
           +F+  +  IL+AT++  RG+D+E V  V NYD P  S+ Y+HR+ R  R   KG A TF 
Sbjct: 463 EFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFF 522

Query: 391 SDEN 394
           +  N
Sbjct: 523 TPGN 526


>gi|38201710 DEAD box polypeptide 17 isoform 1 [Homo sapiens]
          Length = 729

 Score =  163 bits (413), Expect = 2e-40
 Identities = 105/364 (28%), Positives = 190/364 (52%), Gaps = 18/364 (4%)

Query: 40  SIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFV 99
           + H + F  +++       ++D  F  P+ +Q +  P A+ G D++  A++G GKT  ++
Sbjct: 172 AFHHANFPQYVMD-----VLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYL 226

Query: 100 LATLQQI------EPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSI 153
           L  +  I      E  +G +  LV+  TRELA Q+ +  + + K    +K +  +GG   
Sbjct: 227 LPAIVHINHQPYLERGDGPIC-LVLAPTRELAQQVQQVADDYGK-CSRLKSTCIYGGAPK 284

Query: 154 KKDEEVLKKNCPHVVVGTPGRILALVRNRSFSLKNVKHFVLDECDKMLEQLDMRRDVQEI 213
                 L++    + + TPGR++  + +   +L+   + VLDE D+ML+ +     +++I
Sbjct: 285 GPQIRDLERGV-EICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLD-MGFEPQIRKI 342

Query: 214 FRLTPHEKQCMMFSATLSKDIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEK 273
                 ++Q +M+SAT  K++R +   F++D  ++ V +      H + Q      +SEK
Sbjct: 343 VDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEK 402

Query: 274 NRKLFDLLDVL---EFNQVIIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQ 330
           + KL  L++ +   + N+ IIFV++ +RC  L + +    +PA+ IH   +Q ER     
Sbjct: 403 DHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLN 462

Query: 331 QFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFV 390
           +F+  +  IL+AT++  RG+D+E V  V NYD P  S+ Y+HR+ R  R   KG A TF 
Sbjct: 463 EFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFF 522

Query: 391 SDEN 394
           +  N
Sbjct: 523 TPGN 526


>gi|222352149 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 [Homo
           sapiens]
          Length = 648

 Score =  163 bits (412), Expect = 3e-40
 Identities = 109/378 (28%), Positives = 198/378 (52%), Gaps = 16/378 (4%)

Query: 49  FLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFV------LAT 102
           F   PE++  I   GF+ P+ +Q +  P  + G+D++  A++G GKT  ++      L  
Sbjct: 247 FQCYPEVMENIKKAGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGKTLCYLMPGFIHLVL 306

Query: 103 LQQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEV--L 160
              ++    +  +LV+  TRELA Q+  E  ++S Y     V V+ GG    +DE++  L
Sbjct: 307 QPSLKGQRNRPGMLVLTPTRELALQVEGECCKYS-YKGLRSVCVYGGG---NRDEQIEEL 362

Query: 161 KKNCPHVVVGTPGRILALVRNRSFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHE 220
           KK    +++ TPGR+  L  +   +LKN+ + VLDE DKML+ +     + +I      +
Sbjct: 363 KKGVD-IIIATPGRLNDLQMSNFVNLKNITYLVLDEADKMLD-MGFEPQIMKILLDVRPD 420

Query: 221 KQCMMFSATLSKDIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDL 280
           +Q +M SAT    +  + + ++++PM V+V     + +  ++Q  +   + EK   +   
Sbjct: 421 RQTVMTSATWPHSVHRLAQSYLKEPMIVYVGTLDLVAVSSVKQNIIVTTEEEKWSHMQTF 480

Query: 281 LDVLEF-NQVIIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRI 339
           L  +   ++VI+FV        L+  L+  N    ++H    Q +R    + FK  + RI
Sbjct: 481 LQSMSSTDKVIVFVSRKAVADHLSSDLILGNISVESLHGDREQRDREKALENFKTGKVRI 540

Query: 340 LVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKIL 399
           L+AT+L  RG+D+  V  V+N+D P + + Y+HR+ R GR G  G++IT ++  ND ++ 
Sbjct: 541 LIATDLASRGLDVHDVTHVYNFDFPRNIEEYVHRIGRTGRAGRTGVSITTLT-RNDWRVA 599

Query: 400 NDVQDRFEVNVAELPEEI 417
           +++ +  E     +PEE+
Sbjct: 600 SELINILERANQSIPEEL 617


>gi|209862869 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 3
           [Homo sapiens]
          Length = 724

 Score =  163 bits (412), Expect = 3e-40
 Identities = 114/399 (28%), Positives = 196/399 (49%), Gaps = 29/399 (7%)

Query: 46  FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ 105
           F +  L   L   I   G+   + VQ   IP  + G D++  A++G GKTA F+L  L  
Sbjct: 290 FEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAH 349

Query: 106 IEPVNGQVTV-----------LVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIK 154
           +  ++  +T            +++  TREL  QI  E  +FS +   V+  V +GG  + 
Sbjct: 350 M--MHDGITASRFKELQEPECIIVAPTRELVNQIYLEARKFS-FGTCVRAVVIYGGTQLG 406

Query: 155 KDEEVLKKNCPHVVVGTPGRILALVRNRSFSLKNVKHFVLDECDKMLEQ---LDMRRDVQ 211
                + + C +++  TPGR++ ++      LK +K+ VLDE D+ML+     +M++ + 
Sbjct: 407 HSIRQIVQGC-NILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLIS 465

Query: 212 EIFRLTPHEKQCMMFSATLSKDIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDS 271
                +  ++Q +MFSAT  ++I+ +  +F++         +       +QQ  +++   
Sbjct: 466 CPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQF 525

Query: 272 EKNRKLFDLLDVLEFNQVIIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQ 331
            K  KL ++L  +   + ++FV++ ++   +A  L ++     +IH    Q ER      
Sbjct: 526 SKREKLVEILRNIGDERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGD 585

Query: 332 FKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVS 391
           F+  +  +LVAT++  RG+DIE V  V N+D+P   D Y+HR+ R GR G  G AI+F  
Sbjct: 586 FRFGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFD 645

Query: 392 DEND-------AKILNDVQDRFEVNVAELPEEIDISTYI 423
            E+D        K+L D Q     +V    EEI  STYI
Sbjct: 646 LESDNHLAQPLVKVLTDAQQ----DVPAWLEEIAFSTYI 680


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.137    0.395 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,425,182
Number of Sequences: 37866
Number of extensions: 673326
Number of successful extensions: 2611
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 2361
Number of HSP's gapped (non-prelim): 98
length of query: 427
length of database: 18,247,518
effective HSP length: 105
effective length of query: 322
effective length of database: 14,271,588
effective search space: 4595451336
effective search space used: 4595451336
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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