C19orf2 11772

Name: C19orf2	Sequence: fasta or formatted (495aa)		NCBI GI: 19924161
Description: RPB5-mediating protein isoform b		Referenced in: RNA Polymerase and General Transcription Factors
Other entries for this name: alt prot [535aa] RPB5-mediating protein isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.5 32 2 C cysteine 1.6 8 1 D aspartate 9.9 49 13 E glutamate 9.9 49 3 F phenylalanine 3.4 17 1 G glycine 4.0 20 1 H histidine 2.8 14 1 I isoleucine 4.2 21 1 K lysine 8.7 43 2 L leucine 6.7 33 2 M methionine 1.2 6 1 N asparagine 4.6 23 1 P proline 4.8 24 3 Q glutamine 2.2 11 2 R arginine 5.9 29 2 S serine 9.5 47 3 T threonine 5.7 28 2 V valine 6.5 32 2 W tryptophan 0.6 3 1 Y tyrosine 1.2 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 RPB5-mediating protein isoform b C19orf2 0.975 RPB5-mediating protein isoform a ATAD2 0.026 ATPase family, AAA domain containing 2 TMF1 0.025 TATA element modulatory factor 1 TAF7L 0.023 TATA box binding protein-associated factor, RNA poly... DSPP 0.022 dentin sialophosphoprotein preproprotein HRC 0.022 histidine rich calcium binding protein precursor [Hom... NPM1 0.021 nucleophosmin 1 isoform 3 NPM1 0.021 nucleophosmin 1 isoform 1 CENPB 0.020 centromere protein B SPOCK3 0.020 testican 3 isoform 1 SPOCK3 0.020 testican 3 isoform 2 NCL 0.020 nucleolin CASZ1 0.020 castor homolog 1, zinc finger isoform a SETD1B 0.020 SET domain containing 1B LMOD3 0.020 leiomodin 3 (fetal) NPM1 0.019 nucleophosmin 1 isoform 2 CASQ2 0.018 cardiac calsequestrin 2 precursor NPAS3 0.018 neuronal PAS domain protein 3 isoform 2 NPAS3 0.018 neuronal PAS domain protein 3 isoform 1 TSPYL2 0.018 TSPY-like 2 UBTF 0.018 upstream binding transcription factor, RNA polymera... UBTF 0.018 upstream binding transcription factor, RNA polymera... UBTF 0.018 upstream binding transcription factor, RNA polymerase... ESF1 0.018 ABT1-associated protein MTERFD2 0.018 MTERF domain containing 2 REST 0.017 RE1-silencing transcription factor DMP1 0.017 dentin matrix acidic phosphoprotein 1 isoform 1 precu... IWS1 0.017 IWS1 homolog ACRC 0.017 ACRC protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.