TMF1 596

Name: TMF1	Sequence: fasta or formatted (1093aa)		NCBI GI: 110347443
Description: TATA element modulatory factor 1		Referenced in: Nuclear Receptors Non-Receptor Tyrosine Kinase Pathways
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.6 72 3 C cysteine 0.8 9 2 D aspartate 4.8 52 2 E glutamate 14.0 153 3 F phenylalanine 1.7 19 2 G glycine 2.9 32 2 H histidine 1.3 14 1 I isoleucine 4.2 46 2 K lysine 8.3 91 2 L leucine 10.2 111 2 M methionine 2.0 22 1 N asparagine 4.1 45 2 P proline 3.3 36 2 Q glutamine 6.6 72 3 R arginine 4.8 53 2 S serine 12.1 132 3 T threonine 5.9 65 2 V valine 4.8 53 2 W tryptophan 0.5 5 1 Y tyrosine 1.0 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 TATA element modulatory factor 1 CENPF 0.050 centromere protein F MYH11 0.048 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.048 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.048 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.048 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... MYO18A 0.045 myosin 18A isoform b MYO18A 0.045 myosin 18A isoform a CGNL1 0.045 cingulin-like 1 TRIP11 0.044 thyroid hormone receptor interactor 11 KTN1 0.043 kinectin 1 isoform c CCDC88A 0.043 coiled-coil domain containing 88A isoform 2 CCDC88A 0.043 coiled-coil domain containing 88A isoform 1 EEA1 0.042 early endosome antigen 1, 162kD MYH7B 0.042 myosin, heavy polypeptide 7B, cardiac muscle, beta ... MYH10 0.041 myosin, heavy polypeptide 10, non-muscle MYH13 0.041 myosin, heavy polypeptide 13, skeletal muscle [Homo... CCDC147 0.041 coiled-coil domain containing 147 CLIP1 0.040 restin isoform b GCC2 0.040 GRIP and coiled-coil domain-containing 2 MYH3 0.040 myosin, heavy chain 3, skeletal muscle, embryonic [H... CEP164 0.039 centrosomal protein 164kDa MYH4 0.039 myosin, heavy polypeptide 4, skeletal muscle CLIP1 0.039 restin isoform a MYH15 0.039 myosin, heavy polypeptide 15 CENPE 0.039 centromere protein E ROCK2 0.038 Rho-associated, coiled-coil containing protein kinas... MYH7 0.038 myosin, heavy chain 7, cardiac muscle, beta KTN1 0.038 kinectin 1 isoform a KTN1 0.038 kinectin 1 isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.