Guide to the Human Genome
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Name: MEF2A Sequence: fasta or formatted (497aa) NCBI GI: 195972801
Description:

myocyte enhancer factor 2A isoform 2

Referenced in:

Muscle
Additional Genes in Development

Other entries for this name:
alt prot [499aa] myocyte enhancer factor 2A isoform 1
alt prot [437aa] myocyte enhancer factor 2A isoform 3
alt prot [429aa] myocyte enhancer factor 2A isoform 4
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         24           2
 C cysteine            0.6          3           1
 D aspartate           4.8         24           2
 E glutamate           3.2         16           1
 F phenylalanine       2.6         13           1
 G glycine             7.2         36           3
 H histidine           1.2          6           2
 I isoleucine          3.2         16           2
 K lysine              3.8         19           2
 L leucine             8.0         40           2
 M methionine          3.4         17           2
 N asparagine          5.4         27           1
 P proline            11.7         58           5
 Q glutamine           7.0         35          11
 R arginine            5.0         25           1
 S serine             13.9         69           6
 T threonine           6.4         32           2
 V valine              5.0         25           2
 W tryptophan          0.4          2           1
 Y tyrosine            2.0         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myocyte enhancer factor 2A isoform 2 
MEF2A                 0.933   myocyte enhancer factor 2A isoform 1 
MEF2A                 0.828   myocyte enhancer factor 2A isoform 4 
MEF2A                 0.820   myocyte enhancer factor 2A isoform 3 
MEF2C                 0.508   myocyte enhancer factor 2C isoform 1 
MEF2C                 0.498   myocyte enhancer factor 2C isoform 2 
MEF2D                 0.483   myocyte enhancer factor 2D 
LOC100294395          0.299   PREDICTED: similar to serum response factor-related...
MEF2B                 0.160   myocyte enhancer factor 2B isoform a 
LOC729991-MEF2B       0.159   myocyte enhancer factor 2B isoform b 
SRF                   0.045   serum response factor (c-fos serum response element-b...
MUC5B                 0.033   mucin 5, subtype B, tracheobronchial 
ATN1                  0.032   atrophin-1 
ATN1                  0.032   atrophin-1 
TOB1                  0.031   transducer of ERBB2, 1 
SATB1                 0.030   special AT-rich sequence binding protein 1 
SATB1                 0.030   special AT-rich sequence binding protein 1 
MAML2                 0.030   mastermind-like 2 
CDX2                  0.028   caudal type homeobox 2 
HTT                   0.028   huntingtin 
SRCAP                 0.028   Snf2-related CBP activator protein 
EP400                 0.026   E1A binding protein p400 
SRRM2                 0.026   splicing coactivator subunit SRm300 
MAML3                 0.026   mastermind-like 3 
MUC7                  0.026   mucin 7, secreted precursor 
MUC7                  0.026   mucin 7, secreted precursor 
MUC7                  0.026   mucin 7, secreted precursor 
MED12                 0.026   mediator complex subunit 12 
EP300                 0.025   E1A binding protein p300 
LOC100133756          0.025   PREDICTED: hypothetical protein, partial 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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