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Search of human proteins with 189571662
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|189571662 delta-sarcoglycan isoform 3 [Homo sapiens]
(289 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|189571662 delta-sarcoglycan isoform 3 [Homo sapiens] 576 e-165
gi|21314619 delta-sarcoglycan isoform 1 [Homo sapiens] 576 e-165
gi|27477101 delta-sarcoglycan isoform 2 [Homo sapiens] 462 e-130
gi|94721265 sarcoglycan zeta [Homo sapiens] 339 1e-93
gi|4557847 gamma sarcoglycan [Homo sapiens] 306 1e-83
gi|4506913 sarcoglycan, beta [Homo sapiens] 54 2e-07
gi|7662244 DAZ interacting protein 3, zinc finger [Homo sapiens] 31 1.1
gi|48375167 microtubule-associated protein 6 isoform 2 [Homo sap... 29 4.2
gi|48375173 microtubule-associated protein 6 isoform 1 [Homo sap... 29 4.2
gi|11345454 Fanconi anemia, complementation group E [Homo sapiens] 29 5.5
gi|194294523 intersectin 2 isoform 3 [Homo sapiens] 29 5.5
gi|194294521 intersectin 2 isoform 1 [Homo sapiens] 29 5.5
gi|194294525 intersectin 2 isoform 2 [Homo sapiens] 29 5.5
gi|112363080 microtubule associated serine/threonine kinase 2 [H... 28 7.2
gi|45120119 microtubule associated serine/threonine kinase 1 [Ho... 28 9.4
gi|212549555 interleukin enhancer binding factor 3 isoform e [Ho... 28 9.4
gi|212549553 interleukin enhancer binding factor 3 isoform d [Ho... 28 9.4
gi|24234756 interleukin enhancer binding factor 3 isoform c [Hom... 28 9.4
gi|24234753 interleukin enhancer binding factor 3 isoform b [Hom... 28 9.4
gi|24234750 interleukin enhancer binding factor 3 isoform a [Hom... 28 9.4
gi|15619015 protein kinase, cAMP-dependent, catalytic, gamma [Ho... 28 9.4
>gi|189571662 delta-sarcoglycan isoform 3 [Homo sapiens]
Length = 289
Score = 576 bits (1484), Expect = e-165
Identities = 289/289 (100%), Positives = 289/289 (100%)
Query: 1 MPQEQYTHHRSTMPGSVGPQVYKVGIYGWRKRCLYFFVLLLMILILVNLAMTIWILKVMN 60
MPQEQYTHHRSTMPGSVGPQVYKVGIYGWRKRCLYFFVLLLMILILVNLAMTIWILKVMN
Sbjct: 1 MPQEQYTHHRSTMPGSVGPQVYKVGIYGWRKRCLYFFVLLLMILILVNLAMTIWILKVMN 60
Query: 61 FTIDGMGNLRITEKGLKLEGDSEFLQPLYAKEIQSRPGNALYFKSARNVTVNILNDQTKV 120
FTIDGMGNLRITEKGLKLEGDSEFLQPLYAKEIQSRPGNALYFKSARNVTVNILNDQTKV
Sbjct: 61 FTIDGMGNLRITEKGLKLEGDSEFLQPLYAKEIQSRPGNALYFKSARNVTVNILNDQTKV 120
Query: 121 LTQLITGPKAVEAYGKKFEVKTVSGKLLFSADNNEVVVGAERLRVLGAEGTVFPKSIETP 180
LTQLITGPKAVEAYGKKFEVKTVSGKLLFSADNNEVVVGAERLRVLGAEGTVFPKSIETP
Sbjct: 121 LTQLITGPKAVEAYGKKFEVKTVSGKLLFSADNNEVVVGAERLRVLGAEGTVFPKSIETP 180
Query: 181 NVRADPFKELRLESPTRSLVMEAPKGVEINAEAGNMEATCRTELRLESKDGEIKLDAAKI 240
NVRADPFKELRLESPTRSLVMEAPKGVEINAEAGNMEATCRTELRLESKDGEIKLDAAKI
Sbjct: 181 NVRADPFKELRLESPTRSLVMEAPKGVEINAEAGNMEATCRTELRLESKDGEIKLDAAKI 240
Query: 241 RLPRLPHGSYTPTGTRQKVFEICVCANGRLFLSQAGAGSTCQINTSVCL 289
RLPRLPHGSYTPTGTRQKVFEICVCANGRLFLSQAGAGSTCQINTSVCL
Sbjct: 241 RLPRLPHGSYTPTGTRQKVFEICVCANGRLFLSQAGAGSTCQINTSVCL 289
>gi|21314619 delta-sarcoglycan isoform 1 [Homo sapiens]
Length = 290
Score = 576 bits (1484), Expect = e-165
Identities = 289/289 (100%), Positives = 289/289 (100%)
Query: 1 MPQEQYTHHRSTMPGSVGPQVYKVGIYGWRKRCLYFFVLLLMILILVNLAMTIWILKVMN 60
MPQEQYTHHRSTMPGSVGPQVYKVGIYGWRKRCLYFFVLLLMILILVNLAMTIWILKVMN
Sbjct: 2 MPQEQYTHHRSTMPGSVGPQVYKVGIYGWRKRCLYFFVLLLMILILVNLAMTIWILKVMN 61
Query: 61 FTIDGMGNLRITEKGLKLEGDSEFLQPLYAKEIQSRPGNALYFKSARNVTVNILNDQTKV 120
FTIDGMGNLRITEKGLKLEGDSEFLQPLYAKEIQSRPGNALYFKSARNVTVNILNDQTKV
Sbjct: 62 FTIDGMGNLRITEKGLKLEGDSEFLQPLYAKEIQSRPGNALYFKSARNVTVNILNDQTKV 121
Query: 121 LTQLITGPKAVEAYGKKFEVKTVSGKLLFSADNNEVVVGAERLRVLGAEGTVFPKSIETP 180
LTQLITGPKAVEAYGKKFEVKTVSGKLLFSADNNEVVVGAERLRVLGAEGTVFPKSIETP
Sbjct: 122 LTQLITGPKAVEAYGKKFEVKTVSGKLLFSADNNEVVVGAERLRVLGAEGTVFPKSIETP 181
Query: 181 NVRADPFKELRLESPTRSLVMEAPKGVEINAEAGNMEATCRTELRLESKDGEIKLDAAKI 240
NVRADPFKELRLESPTRSLVMEAPKGVEINAEAGNMEATCRTELRLESKDGEIKLDAAKI
Sbjct: 182 NVRADPFKELRLESPTRSLVMEAPKGVEINAEAGNMEATCRTELRLESKDGEIKLDAAKI 241
Query: 241 RLPRLPHGSYTPTGTRQKVFEICVCANGRLFLSQAGAGSTCQINTSVCL 289
RLPRLPHGSYTPTGTRQKVFEICVCANGRLFLSQAGAGSTCQINTSVCL
Sbjct: 242 RLPRLPHGSYTPTGTRQKVFEICVCANGRLFLSQAGAGSTCQINTSVCL 290
>gi|27477101 delta-sarcoglycan isoform 2 [Homo sapiens]
Length = 256
Score = 462 bits (1189), Expect = e-130
Identities = 232/234 (99%), Positives = 234/234 (100%)
Query: 1 MPQEQYTHHRSTMPGSVGPQVYKVGIYGWRKRCLYFFVLLLMILILVNLAMTIWILKVMN 60
MPQEQYTHHRSTMPGSVGPQVYKVGIYGWRKRCLYFFVLLLMILILVNLAMTIWILKVMN
Sbjct: 2 MPQEQYTHHRSTMPGSVGPQVYKVGIYGWRKRCLYFFVLLLMILILVNLAMTIWILKVMN 61
Query: 61 FTIDGMGNLRITEKGLKLEGDSEFLQPLYAKEIQSRPGNALYFKSARNVTVNILNDQTKV 120
FTIDGMGNLRITEKGLKLEGDSEFLQPLYAKEIQSRPGNALYFKSARNVTVNILNDQTKV
Sbjct: 62 FTIDGMGNLRITEKGLKLEGDSEFLQPLYAKEIQSRPGNALYFKSARNVTVNILNDQTKV 121
Query: 121 LTQLITGPKAVEAYGKKFEVKTVSGKLLFSADNNEVVVGAERLRVLGAEGTVFPKSIETP 180
LTQLITGPKAVEAYGKKFEVKTVSGKLLFSADNNEVVVGAERLRVLGAEGTVFPKSIETP
Sbjct: 122 LTQLITGPKAVEAYGKKFEVKTVSGKLLFSADNNEVVVGAERLRVLGAEGTVFPKSIETP 181
Query: 181 NVRADPFKELRLESPTRSLVMEAPKGVEINAEAGNMEATCRTELRLESKDGEIK 234
NVRADPFKELRLESPTRSLVMEAPKGVEINAEAGNMEATCRTELRLESKDGE++
Sbjct: 182 NVRADPFKELRLESPTRSLVMEAPKGVEINAEAGNMEATCRTELRLESKDGEVR 235
>gi|94721265 sarcoglycan zeta [Homo sapiens]
Length = 312
Score = 339 bits (870), Expect = 1e-93
Identities = 169/297 (56%), Positives = 227/297 (76%), Gaps = 8/297 (2%)
Query: 1 MPQEQY--THHRSTMPGSVGPQVYKVGIYGWRKRCLYFFVLLLMILILVNLAMTIWILKV 58
M +EQY ++ +P + Q+Y VGIYGWRKRCLYFFVLLL++ ++VNLAMTIWILKV
Sbjct: 14 MTREQYILATQQNNLPRTENAQLYPVGIYGWRKRCLYFFVLLLLVTMIVNLAMTIWILKV 73
Query: 59 MNFTIDGMGNLRITEKGLKLEGDSEFLQPLYAKEIQSRPGNALYFKSARNVTVNILNDQT 118
MNFT+DGMGNLR+T+KG++LEG SEFL PLY KEI SR + L +S RNVTVN N
Sbjct: 74 MNFTVDGMGNLRVTKKGIRLEGISEFLLPLYVKEIHSRKDSPLVLQSDRNVTVNARNHMG 133
Query: 119 KVLTQLITGPKAVEAYGKKFEVK-TVSGKLLFSADNNEVVVGAERLRVLGAEGTVFPKSI 177
++ QL G AVEA K+FEV+ + G++LFSAD +E+ +GAE+L+V G EG VF S+
Sbjct: 134 QLTGQLTIGADAVEAQCKRFEVRASEDGRVLFSADEDEITIGAEKLKVTGTEGAVFGHSV 193
Query: 178 ETPNVRADPFKELRLESPTRSLVMEAPKGVEINAEAGNMEATCRTELRLESKDGEIKLDA 237
ETP++RA+P ++LRLESPTRSL+MEAP+GV+++A AG+ +ATCR EL L+S +GEI L+A
Sbjct: 194 ETPHIRAEPSQDLRLESPTRSLIMEAPRGVQVSAAAGDFKATCRKELHLQSTEGEIFLNA 253
Query: 238 AKIRLPRLPHGSY-----TPTGTRQKVFEICVCANGRLFLSQAGAGSTCQINTSVCL 289
I+L LP GS+ + + +RQ V+E+CVC NG+L+LS AG GSTCQ ++++CL
Sbjct: 254 ETIKLGNLPTGSFSSSSPSSSSSRQTVYELCVCPNGKLYLSPAGVGSTCQSSSNICL 310
>gi|4557847 gamma sarcoglycan [Homo sapiens]
Length = 291
Score = 306 bits (785), Expect = 1e-83
Identities = 149/269 (55%), Positives = 202/269 (75%)
Query: 21 VYKVGIYGWRKRCLYFFVLLLMILILVNLAMTIWILKVMNFTIDGMGNLRITEKGLKLEG 80
VYK+GIYGWRKRCLY FVLLL+I+++VNLA+TIWILKVM F+ GMG+L +T+ GL+LEG
Sbjct: 23 VYKIGIYGWRKRCLYLFVLLLLIILVVNLALTIWILKVMWFSPAGMGHLCVTKDGLRLEG 82
Query: 81 DSEFLQPLYAKEIQSRPGNALYFKSARNVTVNILNDQTKVLTQLITGPKAVEAYGKKFEV 140
+SEFL PLYAKEI SR ++L +S +NVTVN N + +V +L GPK VE ++F++
Sbjct: 83 ESEFLFPLYAKEIHSRVDSSLLLQSTQNVTVNARNSEGEVTGRLKVGPKMVEVQNQQFQI 142
Query: 141 KTVSGKLLFSADNNEVVVGAERLRVLGAEGTVFPKSIETPNVRADPFKELRLESPTRSLV 200
+ GK LF+ D EVVVG ++LRV G EG +F S+ETP VRADPF++LRLESPTRSL
Sbjct: 143 NSNDGKPLFTVDEKEVVVGTDKLRVTGPEGALFEHSVETPLVRADPFQDLRLESPTRSLS 202
Query: 201 MEAPKGVEINAEAGNMEATCRTELRLESKDGEIKLDAAKIRLPRLPHGSYTPTGTRQKVF 260
M+AP+GV I A AG +EA + ++ S DG + LDA + LP+L G++ P+G+ Q ++
Sbjct: 203 MDAPRGVHIQAHAGKIEALSQMDILFHSSDGMLVLDAETVCLPKLVQGTWGPSGSSQSLY 262
Query: 261 EICVCANGRLFLSQAGAGSTCQINTSVCL 289
EICVC +G+L+LS AG +TCQ ++ +CL
Sbjct: 263 EICVCPDGKLYLSVAGVSTTCQEHSHICL 291
>gi|4506913 sarcoglycan, beta [Homo sapiens]
Length = 318
Score = 53.5 bits (127), Expect = 2e-07
Identities = 61/283 (21%), Positives = 117/283 (41%), Gaps = 33/283 (11%)
Query: 20 QVYKVGIYGWRKRCLYFFVLLLMILILVNLAMTIWILKVMNFTIDGMGNLRITEKGL--- 76
+++K G+ G + ++LL IL ++NL +T+ I V+ +G ++ E GL
Sbjct: 51 RLHKTGLRGRKGNLAICVIILLFILAVINLIITLVIWAVIRIGPNGCDSMEFHESGLLRF 110
Query: 77 KLEGDSEFLQPLYAKEIQSRPGNALYFKSARNVTVNILNDQTKVLTQLITGPKAVEAYGK 136
K D + PLY + R RN + I + ++ Q T +VE
Sbjct: 111 KQVSDMGVIHPLYKSTVGGR----------RNENLVITGNNQPIVFQQGTTKLSVE--NN 158
Query: 137 KFEVKTVSGKLLFSADNNEVVVGAE----RLRVLGAEGTVFPKSIETPNVRADPFKELRL 192
K + + G F ++ + + ++ + T + ++ +L +
Sbjct: 159 KTSITSDIGMQFFDPRTQNILFSTDYETHEFHLPSGVKSLNVQKASTERITSNATSDLNI 218
Query: 193 ESPTRSLVMEAPKGVEINAE------AGNMEATCRTELRLESKDGEIKLDAAKIRLPRLP 246
+ R++V +GV I + GNME + L +G + + RLP
Sbjct: 219 KVDGRAIV-RGNEGVFIMGKTIEFHMGGNMELKAENSIIL---NGSVMVSTT--RLPSSS 272
Query: 247 HGSYTPTGTRQKVFEICVCANGRLFLSQAGAGST-CQINTSVC 288
G +G + +++C+CA+G LF Q + + CQI+ + C
Sbjct: 273 SGDQLGSGDWVR-YKLCMCADGTLFKVQVTSQNMGCQISDNPC 314
>gi|7662244 DAZ interacting protein 3, zinc finger [Homo sapiens]
Length = 1208
Score = 31.2 bits (69), Expect = 1.1
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 109 VTVNILNDQTKVLTQLITGPKAVEAYGKK-----FEVKTVSGKLLFSADNNEVVVGAERL 163
V VN+L + K+L + T PK V + KK F +T+ ++ ++ N E +V A L
Sbjct: 46 VPVNLLLEVKKLLNAINTLPKGVVPHIKKFLQEDFSFQTMQREVAANSQNGEEIVPALTL 105
Query: 164 RVLGAEGTVFPKSIETPNVRA 184
R L + ++I+ N A
Sbjct: 106 RFLITQLEAALRNIQAGNYTA 126
>gi|48375167 microtubule-associated protein 6 isoform 2 [Homo
sapiens]
Length = 439
Score = 29.3 bits (64), Expect = 4.2
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
Query: 150 SADNNEVVVGAERLRVLGAEGTVFPKSIETPNVRAD-PFKELRLESPTRSLV-MEAPKGV 207
+ADN V+ R+R L +E P +E P+V++ P K PTR +A G
Sbjct: 349 TADNK--VIDRRRIRSLYSEPFKEPPKVEKPSVQSSKPKKTSASHKPTRKAKDKQAVSGQ 406
Query: 208 EINAEAGNMEATCRTELRLESKDGEIKLDAAK 239
++ +T + + + +SK+ KL AK
Sbjct: 407 AAKKKSAEGPSTTKPDDKEQSKEMNNKLAEAK 438
>gi|48375173 microtubule-associated protein 6 isoform 1 [Homo
sapiens]
Length = 813
Score = 29.3 bits (64), Expect = 4.2
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
Query: 150 SADNNEVVVGAERLRVLGAEGTVFPKSIETPNVRAD-PFKELRLESPTRSLV-MEAPKGV 207
+ADN V+ R+R L +E P +E P+V++ P K PTR +A G
Sbjct: 349 TADNK--VIDRRRIRSLYSEPFKEPPKVEKPSVQSSKPKKTSASHKPTRKAKDKQAVSGQ 406
Query: 208 EINAEAGNMEATCRTELRLESKDGEIKLDAAK 239
++ +T + + + +SK+ KL AK
Sbjct: 407 AAKKKSAEGPSTTKPDDKEQSKEMNNKLAEAK 438
>gi|11345454 Fanconi anemia, complementation group E [Homo sapiens]
Length = 536
Score = 28.9 bits (63), Expect = 5.5
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 216 MEATCRTELRLESKDGEIKLDAAKIRLPRL 245
+EA CR E ++ DG ++L +RLPR+
Sbjct: 64 LEALCREEPVVQGPDGRLELKPLLLRLPRI 93
>gi|194294523 intersectin 2 isoform 3 [Homo sapiens]
Length = 1670
Score = 28.9 bits (63), Expect = 5.5
Identities = 17/65 (26%), Positives = 31/65 (47%)
Query: 175 KSIETPNVRADPFKELRLESPTRSLVMEAPKGVEINAEAGNMEATCRTELRLESKDGEIK 234
K I++ N +++++ E P + L + + N E GNME R + +E + E +
Sbjct: 335 KQIDSINGTLPSYQKMQEEEPQKKLPVTFEDKRKANYERGNMELEKRRQALMEQQQREAE 394
Query: 235 LDAAK 239
A K
Sbjct: 395 RKAQK 399
>gi|194294521 intersectin 2 isoform 1 [Homo sapiens]
Length = 1697
Score = 28.9 bits (63), Expect = 5.5
Identities = 17/65 (26%), Positives = 31/65 (47%)
Query: 175 KSIETPNVRADPFKELRLESPTRSLVMEAPKGVEINAEAGNMEATCRTELRLESKDGEIK 234
K I++ N +++++ E P + L + + N E GNME R + +E + E +
Sbjct: 335 KQIDSINGTLPSYQKMQEEEPQKKLPVTFEDKRKANYERGNMELEKRRQALMEQQQREAE 394
Query: 235 LDAAK 239
A K
Sbjct: 395 RKAQK 399
>gi|194294525 intersectin 2 isoform 2 [Homo sapiens]
Length = 1249
Score = 28.9 bits (63), Expect = 5.5
Identities = 17/65 (26%), Positives = 31/65 (47%)
Query: 175 KSIETPNVRADPFKELRLESPTRSLVMEAPKGVEINAEAGNMEATCRTELRLESKDGEIK 234
K I++ N +++++ E P + L + + N E GNME R + +E + E +
Sbjct: 335 KQIDSINGTLPSYQKMQEEEPQKKLPVTFEDKRKANYERGNMELEKRRQALMEQQQREAE 394
Query: 235 LDAAK 239
A K
Sbjct: 395 RKAQK 399
>gi|112363080 microtubule associated serine/threonine kinase 2 [Homo
sapiens]
Length = 1798
Score = 28.5 bits (62), Expect = 7.2
Identities = 19/61 (31%), Positives = 28/61 (45%)
Query: 34 LYFFVLLLMILILVNLAMTIWILKVMNFTIDGMGNLRITEKGLKLEGDSEFLQPLYAKEI 93
LYF +L + L N + LK N I MG++++T+ GL G LY I
Sbjct: 614 LYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHI 673
Query: 94 Q 94
+
Sbjct: 674 E 674
>gi|45120119 microtubule associated serine/threonine kinase 1 [Homo
sapiens]
Length = 1570
Score = 28.1 bits (61), Expect = 9.4
Identities = 18/61 (29%), Positives = 28/61 (45%)
Query: 34 LYFFVLLLMILILVNLAMTIWILKVMNFTIDGMGNLRITEKGLKLEGDSEFLQPLYAKEI 93
+YF +L + L N + LK N I MG++++T+ GL G LY I
Sbjct: 476 MYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKMGLMSLTTNLYEGHI 535
Query: 94 Q 94
+
Sbjct: 536 E 536
>gi|212549555 interleukin enhancer binding factor 3 isoform e [Homo
sapiens]
Length = 706
Score = 28.1 bits (61), Expect = 9.4
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 59 MNFTIDGMGNLRITEKGLKLEGDSEFLQPLYAKEIQSRPGNALYFKSARNVTVNI 113
M T+ G+ + + KGL L+GD + L KE +P AL K A N+ + +
Sbjct: 85 MTRTLRGVMRVGLVAKGLLLKGDLDLELVLLCKE---KPTTALLDKVADNLAIQL 136
>gi|212549553 interleukin enhancer binding factor 3 isoform d [Homo
sapiens]
Length = 898
Score = 28.1 bits (61), Expect = 9.4
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 59 MNFTIDGMGNLRITEKGLKLEGDSEFLQPLYAKEIQSRPGNALYFKSARNVTVNI 113
M T+ G+ + + KGL L+GD + L KE +P AL K A N+ + +
Sbjct: 85 MTRTLRGVMRVGLVAKGLLLKGDLDLELVLLCKE---KPTTALLDKVADNLAIQL 136
>gi|24234756 interleukin enhancer binding factor 3 isoform c [Homo
sapiens]
Length = 690
Score = 28.1 bits (61), Expect = 9.4
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 59 MNFTIDGMGNLRITEKGLKLEGDSEFLQPLYAKEIQSRPGNALYFKSARNVTVNI 113
M T+ G+ + + KGL L+GD + L KE +P AL K A N+ + +
Sbjct: 85 MTRTLRGVMRVGLVAKGLLLKGDLDLELVLLCKE---KPTTALLDKVADNLAIQL 136
>gi|24234753 interleukin enhancer binding factor 3 isoform b [Homo
sapiens]
Length = 702
Score = 28.1 bits (61), Expect = 9.4
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 59 MNFTIDGMGNLRITEKGLKLEGDSEFLQPLYAKEIQSRPGNALYFKSARNVTVNI 113
M T+ G+ + + KGL L+GD + L KE +P AL K A N+ + +
Sbjct: 85 MTRTLRGVMRVGLVAKGLLLKGDLDLELVLLCKE---KPTTALLDKVADNLAIQL 136
>gi|24234750 interleukin enhancer binding factor 3 isoform a [Homo
sapiens]
Length = 894
Score = 28.1 bits (61), Expect = 9.4
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 59 MNFTIDGMGNLRITEKGLKLEGDSEFLQPLYAKEIQSRPGNALYFKSARNVTVNI 113
M T+ G+ + + KGL L+GD + L KE +P AL K A N+ + +
Sbjct: 85 MTRTLRGVMRVGLVAKGLLLKGDLDLELVLLCKE---KPTTALLDKVADNLAIQL 136
>gi|15619015 protein kinase, cAMP-dependent, catalytic, gamma [Homo
sapiens]
Length = 351
Score = 28.1 bits (61), Expect = 9.4
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 15 GSVGPQVYKVGIYGWRKRCLYFFVLLLMILILVNLAMTIWILKVMNFTIDGMGNLRITEK 74
G + ++ +VG + C Y ++L + L +L + LK N ID G L++T+
Sbjct: 127 GEMFSRLQRVGRFSEPHACFYAAQVVLAVQYLHSLDLIHRDLKPENLLIDQQGYLQVTDF 186
Query: 75 GL---------KLEGDSEFLQP 87
G L G E+L P
Sbjct: 187 GFAKRVKGRTWTLCGTPEYLAP 208
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.136 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,503,180
Number of Sequences: 37866
Number of extensions: 425786
Number of successful extensions: 1034
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1014
Number of HSP's gapped (non-prelim): 22
length of query: 289
length of database: 18,247,518
effective HSP length: 101
effective length of query: 188
effective length of database: 14,423,052
effective search space: 2711533776
effective search space used: 2711533776
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.