Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 19924163
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|19924163 muscle specific ring finger protein 1 [Homo
sapiens]
(353 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|19924163 muscle specific ring finger protein 1 [Homo sapiens] 716 0.0
gi|34878844 tripartite motif-containing 55 isoform 3 [Homo sapiens] 429 e-120
gi|34878836 tripartite motif-containing 55 isoform 1 [Homo sapiens] 429 e-120
gi|34878821 tripartite motif-containing 55 isoform 2 [Homo sapiens] 429 e-120
gi|78482626 ring finger protein 30 isoform 2 [Homo sapiens] 426 e-119
gi|78482627 ring finger protein 30 isoform 1 [Homo sapiens] 406 e-113
gi|34878852 tripartite motif-containing 55 isoform 4 [Homo sapiens] 299 2e-81
gi|47174859 tripartite motif-containing 46 [Homo sapiens] 150 2e-36
gi|148833499 midline 1 [Homo sapiens] 149 3e-36
gi|4557753 midline 1 [Homo sapiens] 149 3e-36
gi|15451852 midline 1 [Homo sapiens] 149 3e-36
gi|62865606 tripartite motif-containing 36 isoform 1 [Homo sapiens] 146 2e-35
gi|223890259 midline 2 isoform 2 [Homo sapiens] 117 1e-26
gi|223890257 midline 2 isoform 1 [Homo sapiens] 117 1e-26
gi|27436877 tripartite motif-containing 59 [Homo sapiens] 101 1e-21
gi|55953112 ret finger protein 2 isoform 2 [Homo sapiens] 99 4e-21
gi|47132524 ret finger protein 2 isoform 1 [Homo sapiens] 99 4e-21
gi|16445412 ret finger protein 2 isoform 1 [Homo sapiens] 99 4e-21
gi|47132521 ret finger protein 2 isoform 1 [Homo sapiens] 99 4e-21
gi|134288906 tripartite motif-containing 67 [Homo sapiens] 94 2e-19
gi|194248081 tripartite motif-containing 2 isoform 2 [Homo sapiens] 91 2e-18
gi|194248079 tripartite motif-containing 2 isoform 1 [Homo sapiens] 91 2e-18
gi|5730009 ret finger protein [Homo sapiens] 90 3e-18
gi|32454739 tripartite motif-containing 3 [Homo sapiens] 90 3e-18
gi|32454737 tripartite motif-containing 3 [Homo sapiens] 90 3e-18
gi|145275183 tripartite motif protein 34 isoform 3 [Homo sapiens] 89 8e-18
gi|51477687 tripartite motif protein 34 isoform 1 [Homo sapiens] 89 8e-18
gi|18087807 tripartite motif protein 34 isoform 1 [Homo sapiens] 89 8e-18
gi|217035095 tripartite motif-containing 62 [Homo sapiens] 89 8e-18
gi|51477690 tripartite motif-containing 6 and tripartite motif-c... 89 8e-18
>gi|19924163 muscle specific ring finger protein 1 [Homo sapiens]
Length = 353
Score = 716 bits (1849), Expect = 0.0
Identities = 353/353 (100%), Positives = 353/353 (100%)
Query: 1 MDYKSSLIQDGNPMENLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQAANPYWT 60
MDYKSSLIQDGNPMENLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQAANPYWT
Sbjct: 1 MDYKSSLIQDGNPMENLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQAANPYWT 60
Query: 61 SRGSSVSMSGGRFRCPTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHP 120
SRGSSVSMSGGRFRCPTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHP
Sbjct: 61 SRGSSVSMSGGRFRCPTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHP 120
Query: 121 MCKEHEDEKINIYCLTCEVPTCSMCKVFGIHKACEVAPLQSVFQGQKTELNNCISMLVAG 180
MCKEHEDEKINIYCLTCEVPTCSMCKVFGIHKACEVAPLQSVFQGQKTELNNCISMLVAG
Sbjct: 121 MCKEHEDEKINIYCLTCEVPTCSMCKVFGIHKACEVAPLQSVFQGQKTELNNCISMLVAG 180
Query: 181 NDRVQTIITQLEDSRRVTKENSHQVKEELSQKFDTLYAILDEKKSELLQRITQEQEKKLS 240
NDRVQTIITQLEDSRRVTKENSHQVKEELSQKFDTLYAILDEKKSELLQRITQEQEKKLS
Sbjct: 181 NDRVQTIITQLEDSRRVTKENSHQVKEELSQKFDTLYAILDEKKSELLQRITQEQEKKLS 240
Query: 241 FIEALIQQYQEQLDKSTKLVETAIQSLDEPGGATFLLTAKQLIKSIVEASKGCQLGKTEQ 300
FIEALIQQYQEQLDKSTKLVETAIQSLDEPGGATFLLTAKQLIKSIVEASKGCQLGKTEQ
Sbjct: 241 FIEALIQQYQEQLDKSTKLVETAIQSLDEPGGATFLLTAKQLIKSIVEASKGCQLGKTEQ 300
Query: 301 GFENMDFFTLDLEHIADALRAIDFGTDEEEEEFIEEEDQEEEESTEGKEEGHQ 353
GFENMDFFTLDLEHIADALRAIDFGTDEEEEEFIEEEDQEEEESTEGKEEGHQ
Sbjct: 301 GFENMDFFTLDLEHIADALRAIDFGTDEEEEEFIEEEDQEEEESTEGKEEGHQ 353
>gi|34878844 tripartite motif-containing 55 isoform 3 [Homo sapiens]
Length = 452
Score = 429 bits (1103), Expect = e-120
Identities = 212/351 (60%), Positives = 270/351 (76%), Gaps = 10/351 (2%)
Query: 1 MDYKSSLIQDGNPMENLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQAANPYWT 60
++YKS ++ M+NLEKQLICPICLEMFTKPVVILPCQHNLCRKCA+DIFQA+NPY
Sbjct: 5 LNYKS-FSKEQQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNPYLP 63
Query: 61 SRGSSVSMSGGRFRCPTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHP 120
+RG + SGGRFRCP+CRHEV++DRHGVYGLQRNLLVENIIDIYKQE S+RP +K P
Sbjct: 64 TRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQE-STRPEKKSDQP 122
Query: 121 MCKEHEDEKINIYCLTCEVPTCSMCKVFGIHKACEVAPLQSVFQGQKTELNNCISMLVAG 180
MC+EHE+E+INIYCL CEVPTCS+CKVFG HK C+VAPL VFQ QK+EL++ I++LV
Sbjct: 123 MCEEHEEERINIYCLNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAILVGS 182
Query: 181 NDRVQTIITQLEDSRRVTKENSHQVKEELSQKFDTLYAILDEKKSELLQRITQEQEKKLS 240
NDRVQ +I+QLED+ + +E + K+EL +KFD LY IL+E+K+E+ Q IT+ QE+KL
Sbjct: 183 NDRVQGVISQLEDTCKTIEECCRKQKQELCEKFDYLYGILEERKNEMTQVITRTQEEKLE 242
Query: 241 FIEALIQQYQEQLDKSTKLVETAIQSLDEPGGATFLLTAKQLIKSIVEASKGCQLGKTEQ 300
+ ALI++Y + L+ +KLVE+ IQ +DEP A FL AK L+K I EASK Q+ K E
Sbjct: 243 HVRALIKKYSDHLENVSKLVESGIQFMDEPEMAVFLQNAKTLLKKISEASKAFQMEKIEH 302
Query: 301 GFENMDFFTLDLEHIADALRAIDFGTDEEEEEFIEEEDQEEEESTEGKEEG 351
G+ENM+ FT++L +R IDF + E+ED+EEEE EG++EG
Sbjct: 303 GYENMNHFTVNLNREEKIIREIDF--------YREDEDEEEEEGGEGEKEG 345
>gi|34878836 tripartite motif-containing 55 isoform 1 [Homo sapiens]
Length = 548
Score = 429 bits (1103), Expect = e-120
Identities = 212/351 (60%), Positives = 270/351 (76%), Gaps = 10/351 (2%)
Query: 1 MDYKSSLIQDGNPMENLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQAANPYWT 60
++YKS ++ M+NLEKQLICPICLEMFTKPVVILPCQHNLCRKCA+DIFQA+NPY
Sbjct: 5 LNYKS-FSKEQQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNPYLP 63
Query: 61 SRGSSVSMSGGRFRCPTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHP 120
+RG + SGGRFRCP+CRHEV++DRHGVYGLQRNLLVENIIDIYKQE S+RP +K P
Sbjct: 64 TRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQE-STRPEKKSDQP 122
Query: 121 MCKEHEDEKINIYCLTCEVPTCSMCKVFGIHKACEVAPLQSVFQGQKTELNNCISMLVAG 180
MC+EHE+E+INIYCL CEVPTCS+CKVFG HK C+VAPL VFQ QK+EL++ I++LV
Sbjct: 123 MCEEHEEERINIYCLNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAILVGS 182
Query: 181 NDRVQTIITQLEDSRRVTKENSHQVKEELSQKFDTLYAILDEKKSELLQRITQEQEKKLS 240
NDRVQ +I+QLED+ + +E + K+EL +KFD LY IL+E+K+E+ Q IT+ QE+KL
Sbjct: 183 NDRVQGVISQLEDTCKTIEECCRKQKQELCEKFDYLYGILEERKNEMTQVITRTQEEKLE 242
Query: 241 FIEALIQQYQEQLDKSTKLVETAIQSLDEPGGATFLLTAKQLIKSIVEASKGCQLGKTEQ 300
+ ALI++Y + L+ +KLVE+ IQ +DEP A FL AK L+K I EASK Q+ K E
Sbjct: 243 HVRALIKKYSDHLENVSKLVESGIQFMDEPEMAVFLQNAKTLLKKISEASKAFQMEKIEH 302
Query: 301 GFENMDFFTLDLEHIADALRAIDFGTDEEEEEFIEEEDQEEEESTEGKEEG 351
G+ENM+ FT++L +R IDF + E+ED+EEEE EG++EG
Sbjct: 303 GYENMNHFTVNLNREEKIIREIDF--------YREDEDEEEEEGGEGEKEG 345
>gi|34878821 tripartite motif-containing 55 isoform 2 [Homo sapiens]
Length = 540
Score = 429 bits (1103), Expect = e-120
Identities = 212/351 (60%), Positives = 270/351 (76%), Gaps = 10/351 (2%)
Query: 1 MDYKSSLIQDGNPMENLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQAANPYWT 60
++YKS ++ M+NLEKQLICPICLEMFTKPVVILPCQHNLCRKCA+DIFQA+NPY
Sbjct: 5 LNYKS-FSKEQQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNPYLP 63
Query: 61 SRGSSVSMSGGRFRCPTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHP 120
+RG + SGGRFRCP+CRHEV++DRHGVYGLQRNLLVENIIDIYKQE S+RP +K P
Sbjct: 64 TRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQE-STRPEKKSDQP 122
Query: 121 MCKEHEDEKINIYCLTCEVPTCSMCKVFGIHKACEVAPLQSVFQGQKTELNNCISMLVAG 180
MC+EHE+E+INIYCL CEVPTCS+CKVFG HK C+VAPL VFQ QK+EL++ I++LV
Sbjct: 123 MCEEHEEERINIYCLNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAILVGS 182
Query: 181 NDRVQTIITQLEDSRRVTKENSHQVKEELSQKFDTLYAILDEKKSELLQRITQEQEKKLS 240
NDRVQ +I+QLED+ + +E + K+EL +KFD LY IL+E+K+E+ Q IT+ QE+KL
Sbjct: 183 NDRVQGVISQLEDTCKTIEECCRKQKQELCEKFDYLYGILEERKNEMTQVITRTQEEKLE 242
Query: 241 FIEALIQQYQEQLDKSTKLVETAIQSLDEPGGATFLLTAKQLIKSIVEASKGCQLGKTEQ 300
+ ALI++Y + L+ +KLVE+ IQ +DEP A FL AK L+K I EASK Q+ K E
Sbjct: 243 HVRALIKKYSDHLENVSKLVESGIQFMDEPEMAVFLQNAKTLLKKISEASKAFQMEKIEH 302
Query: 301 GFENMDFFTLDLEHIADALRAIDFGTDEEEEEFIEEEDQEEEESTEGKEEG 351
G+ENM+ FT++L +R IDF + E+ED+EEEE EG++EG
Sbjct: 303 GYENMNHFTVNLNREEKIIREIDF--------YREDEDEEEEEGGEGEKEG 345
>gi|78482626 ring finger protein 30 isoform 2 [Homo sapiens]
Length = 358
Score = 426 bits (1096), Expect = e-119
Identities = 210/346 (60%), Positives = 272/346 (78%), Gaps = 5/346 (1%)
Query: 7 LIQDGNPMENLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQAANPYWTSRGSSV 66
L+ D + M+NLEKQLICPICLEMF+KPVVILPCQHNLCRKCAND+FQA+NP W SRGS+
Sbjct: 10 LLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNPLWQSRGSTT 69
Query: 67 SMSGGRFRCPTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGS--HPMCKE 124
SGGRFRCP+CRHEV++DRHGVYGLQRNLLVENIIDIYKQE SSRPL + H MC+E
Sbjct: 70 VSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQE-SSRPLHSKAEQHLMCEE 128
Query: 125 HEDEKINIYCLTCEVPTCSMCKVFGIHKACEVAPLQSVFQGQKTELNNCISMLVAGNDRV 184
HE+EKINIYCL+CEVPTCS+CKVFG HK CEVAPL ++++ QK+EL++ I+MLVAGNDRV
Sbjct: 129 HEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAMLVAGNDRV 188
Query: 185 QTIITQLEDSRRVTKENSHQVKEELSQKFDTLYAILDEKKSELLQRITQEQEKKLSFIEA 244
Q +ITQ+E+ + ++NS + K+ L+Q+F++L A+L+E+K ELLQ + +EQE+KL +
Sbjct: 189 QAVITQMEEVCQTIEDNSRRQKQLLNQRFESLCAVLEERKGELLQALAREQEEKLQRVRG 248
Query: 245 LIQQYQEQLDKSTKLVETAIQSLDEPGGATFLLTAKQLIKSIVEASKGCQLGKTEQGFEN 304
LI+QY + L+ S+KLVE+AIQS++EP A +L AK+LI + SK G+ E G+E+
Sbjct: 249 LIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGAMSKVELAGRPEPGYES 308
Query: 305 MDFFTLDLEHIADALRAIDFGTDEEEEEFIEEEDQEEEESTEGKEE 350
M+ FT+ +EH+A+ LR IDF EE EE + EE + G EE
Sbjct: 309 MEQFTVRVEHVAEMLRTIDFQPGASGEE--EEVAPDGEEGSAGPEE 352
>gi|78482627 ring finger protein 30 isoform 1 [Homo sapiens]
Length = 400
Score = 406 bits (1043), Expect = e-113
Identities = 210/388 (54%), Positives = 272/388 (70%), Gaps = 47/388 (12%)
Query: 7 LIQDGNPMENLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQAANPYWTSRGSSV 66
L+ D + M+NLEKQLICPICLEMF+KPVVILPCQHNLCRKCAND+FQA+NP W SRGS+
Sbjct: 10 LLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNPLWQSRGSTT 69
Query: 67 SMSGGRFRCPTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGS--HPMCKE 124
SGGRFRCP+CRHEV++DRHGVYGLQRNLLVENIIDIYKQE SSRPL + H MC+E
Sbjct: 70 VSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQE-SSRPLHSKAEQHLMCEE 128
Query: 125 HEDEKINIYCLTCEVPTCSMCKVFGIHKACEVAPLQSVFQGQK----------------- 167
HE+EKINIYCL+CEVPTCS+CKVFG HK CEVAPL ++++ QK
Sbjct: 129 HEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKKQDLTLLPRLECSGTNT 188
Query: 168 -------------------------TELNNCISMLVAGNDRVQTIITQLEDSRRVTKENS 202
+EL++ I+MLVAGNDRVQ +ITQ+E+ + ++NS
Sbjct: 189 TYCSLDLPSSSDPPILASQNTKIIDSELSDGIAMLVAGNDRVQAVITQMEEVCQTIEDNS 248
Query: 203 HQVKEELSQKFDTLYAILDEKKSELLQRITQEQEKKLSFIEALIQQYQEQLDKSTKLVET 262
+ K+ L+Q+F++L A+L+E+K ELLQ + +EQE+KL + LI+QY + L+ S+KLVE+
Sbjct: 249 RRQKQLLNQRFESLCAVLEERKGELLQALAREQEEKLQRVRGLIRQYGDHLEASSKLVES 308
Query: 263 AIQSLDEPGGATFLLTAKQLIKSIVEASKGCQLGKTEQGFENMDFFTLDLEHIADALRAI 322
AIQS++EP A +L AK+LI + SK G+ E G+E+M+ FT+ +EH+A+ LR I
Sbjct: 309 AIQSMEEPQMALYLQQAKELINKVGAMSKVELAGRPEPGYESMEQFTVRVEHVAEMLRTI 368
Query: 323 DFGTDEEEEEFIEEEDQEEEESTEGKEE 350
DF EE EE + EE + G EE
Sbjct: 369 DFQPGASGEE--EEVAPDGEEGSAGPEE 394
>gi|34878852 tripartite motif-containing 55 isoform 4 [Homo sapiens]
Length = 241
Score = 299 bits (766), Expect = 2e-81
Identities = 140/194 (72%), Positives = 167/194 (86%), Gaps = 2/194 (1%)
Query: 1 MDYKSSLIQDGNPMENLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQAANPYWT 60
++YKS ++ M+NLEKQLICPICLEMFTKPVVILPCQHNLCRKCA+DIFQA+NPY
Sbjct: 5 LNYKS-FSKEQQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNPYLP 63
Query: 61 SRGSSVSMSGGRFRCPTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHP 120
+RG + SGGRFRCP+CRHEV++DRHGVYGLQRNLLVENIIDIYKQE S+RP +K P
Sbjct: 64 TRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQE-STRPEKKSDQP 122
Query: 121 MCKEHEDEKINIYCLTCEVPTCSMCKVFGIHKACEVAPLQSVFQGQKTELNNCISMLVAG 180
MC+EHE+E+INIYCL CEVPTCS+CKVFG HK C+VAPL VFQ QK+EL++ I++LV
Sbjct: 123 MCEEHEEERINIYCLNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAILVGS 182
Query: 181 NDRVQTIITQLEDS 194
NDRVQ +I+QLED+
Sbjct: 183 NDRVQGVISQLEDT 196
>gi|47174859 tripartite motif-containing 46 [Homo sapiens]
Length = 759
Score = 150 bits (379), Expect = 2e-36
Identities = 109/385 (28%), Positives = 175/385 (45%), Gaps = 99/385 (25%)
Query: 6 SLIQDGNPMENLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIF------------- 52
+L++ M+N+EK+L+CP+C EM+ +P+V LPC HN+C+ CA ++
Sbjct: 16 ALVRISTSMKNMEKELLCPVCQEMYKQPLV-LPCTHNVCQACAREVLGQQGYIGHGGDPS 74
Query: 53 -QAANPYWTSRGSSVSMSG---------------------GR-----------FRCPTCR 79
+ +P T S +S GR F CP C+
Sbjct: 75 SEPTSPASTPSTRSPRLSRRTLPKPDRLDRLLKSGFGTYPGRKRGALHPQVIMFPCPACQ 134
Query: 80 HEVIMDRHGVYGLQRNLLVENIIDIYKQE-----------CSSRPL-------------- 114
+V + G+ GL RNL +E +++ Y+Q C PL
Sbjct: 135 GDVELGERGLAGLFRNLTLERVVERYRQSVSVGGAILCQLCKPPPLEATKGCTECRATFC 194
Query: 115 ------------QKGSHP-------------MCKEHEDEKINIYCLTCEVPTCSMCKVFG 149
QK H MC +H++E + YC TC+ C +C+V
Sbjct: 195 NECFKLFHPWGTQKAQHEPTLPTLSFRPKGLMCPDHKEE-VTHYCKTCQRLVCQLCRVRR 253
Query: 150 IHKACEVAPLQSVFQGQKTELNNCISMLVAGNDRVQTIITQLEDSRRVTKENSHQVKEEL 209
H ++ P+ S +Q K +L ++ ++ D VQT I +LE++ R T+ + Q KEE+
Sbjct: 254 THSGHKITPVLSAYQALKDKLTKSLTYILGNQDTVQTQICELEEAVRHTEVSGQQAKEEV 313
Query: 210 SQKFDTLYAILDEKKSELLQRITQEQEKKLSFIEALIQQYQEQLDKSTKLVETAIQSLDE 269
SQ L A+L+EK++ LLQ I + Q+++L+ + A IQ+++ LD S LV A + L E
Sbjct: 314 SQLVRGLGAVLEEKRASLLQAIEECQQERLARLSAQIQEHRSLLDGS-GLVGYAQEVLKE 372
Query: 270 PGGATFLLTAKQLIKSIVEASKGCQ 294
F+ AKQL I A++ Q
Sbjct: 373 TDQPCFVQAAKQLHNRIARATEALQ 397
>gi|148833499 midline 1 [Homo sapiens]
Length = 667
Score = 149 bits (377), Expect = 3e-36
Identities = 105/396 (26%), Positives = 181/396 (45%), Gaps = 79/396 (19%)
Query: 14 MENLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQAANPYWTSRGSSVSMSGGRF 73
ME LE +L CPICLE+F P+ +LPC H+LC CA+ I + + + S S++ F
Sbjct: 1 METLESELTCPICLELFEDPL-LLPCAHSLCFNCAHRILVS---HCATNESVESITA--F 54
Query: 74 RCPTCRHEVIMDRHGVYGLQRNLLVENIIDIYK--------------------------- 106
+CPTCRH + + + G+ GL+RN+ ++NIID ++
Sbjct: 55 QCPTCRHVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMTSA 114
Query: 107 -----QECSSRPLQ------------------KGSHP----------------------M 121
Q C P Q K +HP M
Sbjct: 115 EKVLCQFCDQDPAQDAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEPIPDSHIRGLM 174
Query: 122 CKEHEDEKINIYCLTCEVPTCSMCKVFGIHKACEVAPLQSVFQGQKTELNNCISMLVAGN 181
C EHEDEK+N+YC+T + C++CK+ G H+ +VA L + K L + ++ L+ N
Sbjct: 175 CLEHEDEKVNMYCVTDDQLICALCKLVGRHRDHQVAALSERYDKLKQNLESNLTNLIKRN 234
Query: 182 DRVQTIITQLEDSRRVTKENSHQVKEELSQKFDTLYAILDEKKSELLQRITQEQEKKLSF 241
++T++ +L + + + N+ + + +L+++ D L I+ +++ + +I + + +L
Sbjct: 235 TELETLLAKLIQTCQHVEVNASRQEAKLTEECDLLIEIIQQRRQIIGTKIKEGKVMRLRK 294
Query: 242 IEALIQQYQEQLDKSTKLVETAIQSLDEPGGATFLLTAKQLIKSIVEASKGCQLGKTEQG 301
+ I ++ +++S L+ A SL E A FL TAK + + + A+ Q+ E
Sbjct: 295 LAQQIANCKQCIERSASLISQAEHSLKENDHARFLQTAKNITERVSMATASSQVLIPEIN 354
Query: 302 F-ENMDFFTLDLEHIADALRAIDFGTDEEEEEFIEE 336
+ D F LD L +D+ T EE
Sbjct: 355 LNDTFDTFALDFSREKKLLECLDYLTAPNPPTIREE 390
>gi|4557753 midline 1 [Homo sapiens]
Length = 667
Score = 149 bits (377), Expect = 3e-36
Identities = 105/396 (26%), Positives = 181/396 (45%), Gaps = 79/396 (19%)
Query: 14 MENLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQAANPYWTSRGSSVSMSGGRF 73
ME LE +L CPICLE+F P+ +LPC H+LC CA+ I + + + S S++ F
Sbjct: 1 METLESELTCPICLELFEDPL-LLPCAHSLCFNCAHRILVS---HCATNESVESITA--F 54
Query: 74 RCPTCRHEVIMDRHGVYGLQRNLLVENIIDIYK--------------------------- 106
+CPTCRH + + + G+ GL+RN+ ++NIID ++
Sbjct: 55 QCPTCRHVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMTSA 114
Query: 107 -----QECSSRPLQ------------------KGSHP----------------------M 121
Q C P Q K +HP M
Sbjct: 115 EKVLCQFCDQDPAQDAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEPIPDSHIRGLM 174
Query: 122 CKEHEDEKINIYCLTCEVPTCSMCKVFGIHKACEVAPLQSVFQGQKTELNNCISMLVAGN 181
C EHEDEK+N+YC+T + C++CK+ G H+ +VA L + K L + ++ L+ N
Sbjct: 175 CLEHEDEKVNMYCVTDDQLICALCKLVGRHRDHQVAALSERYDKLKQNLESNLTNLIKRN 234
Query: 182 DRVQTIITQLEDSRRVTKENSHQVKEELSQKFDTLYAILDEKKSELLQRITQEQEKKLSF 241
++T++ +L + + + N+ + + +L+++ D L I+ +++ + +I + + +L
Sbjct: 235 TELETLLAKLIQTCQHVEVNASRQEAKLTEECDLLIEIIQQRRQIIGTKIKEGKVMRLRK 294
Query: 242 IEALIQQYQEQLDKSTKLVETAIQSLDEPGGATFLLTAKQLIKSIVEASKGCQLGKTEQG 301
+ I ++ +++S L+ A SL E A FL TAK + + + A+ Q+ E
Sbjct: 295 LAQQIANCKQCIERSASLISQAEHSLKENDHARFLQTAKNITERVSMATASSQVLIPEIN 354
Query: 302 F-ENMDFFTLDLEHIADALRAIDFGTDEEEEEFIEE 336
+ D F LD L +D+ T EE
Sbjct: 355 LNDTFDTFALDFSREKKLLECLDYLTAPNPPTIREE 390
>gi|15451852 midline 1 [Homo sapiens]
Length = 667
Score = 149 bits (377), Expect = 3e-36
Identities = 105/396 (26%), Positives = 181/396 (45%), Gaps = 79/396 (19%)
Query: 14 MENLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQAANPYWTSRGSSVSMSGGRF 73
ME LE +L CPICLE+F P+ +LPC H+LC CA+ I + + + S S++ F
Sbjct: 1 METLESELTCPICLELFEDPL-LLPCAHSLCFNCAHRILVS---HCATNESVESITA--F 54
Query: 74 RCPTCRHEVIMDRHGVYGLQRNLLVENIIDIYK--------------------------- 106
+CPTCRH + + + G+ GL+RN+ ++NIID ++
Sbjct: 55 QCPTCRHVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMTSA 114
Query: 107 -----QECSSRPLQ------------------KGSHP----------------------M 121
Q C P Q K +HP M
Sbjct: 115 EKVLCQFCDQDPAQDAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEPIPDSHIRGLM 174
Query: 122 CKEHEDEKINIYCLTCEVPTCSMCKVFGIHKACEVAPLQSVFQGQKTELNNCISMLVAGN 181
C EHEDEK+N+YC+T + C++CK+ G H+ +VA L + K L + ++ L+ N
Sbjct: 175 CLEHEDEKVNMYCVTDDQLICALCKLVGRHRDHQVAALSERYDKLKQNLESNLTNLIKRN 234
Query: 182 DRVQTIITQLEDSRRVTKENSHQVKEELSQKFDTLYAILDEKKSELLQRITQEQEKKLSF 241
++T++ +L + + + N+ + + +L+++ D L I+ +++ + +I + + +L
Sbjct: 235 TELETLLAKLIQTCQHVEVNASRQEAKLTEECDLLIEIIQQRRQIIGTKIKEGKVMRLRK 294
Query: 242 IEALIQQYQEQLDKSTKLVETAIQSLDEPGGATFLLTAKQLIKSIVEASKGCQLGKTEQG 301
+ I ++ +++S L+ A SL E A FL TAK + + + A+ Q+ E
Sbjct: 295 LAQQIANCKQCIERSASLISQAEHSLKENDHARFLQTAKNITERVSMATASSQVLIPEIN 354
Query: 302 F-ENMDFFTLDLEHIADALRAIDFGTDEEEEEFIEE 336
+ D F LD L +D+ T EE
Sbjct: 355 LNDTFDTFALDFSREKKLLECLDYLTAPNPPTIREE 390
>gi|62865606 tripartite motif-containing 36 isoform 1 [Homo sapiens]
Length = 728
Score = 146 bits (369), Expect = 2e-35
Identities = 105/371 (28%), Positives = 166/371 (44%), Gaps = 84/371 (22%)
Query: 3 YKSSLIQDGN-PMENLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQAANPYWTS 61
Y LI G ++N+E++LICP C E+FT P+ ILPCQH++C KC ++ + +
Sbjct: 12 YIMELIAKGKVTIKNIERELICPACKELFTHPL-ILPCQHSICHKCVKELLLTLDDSFND 70
Query: 62 RGSSVS-MSGGRFR------------------------------CPTCRHEVIMDRHGVY 90
GS S S R R CP C H+V + G+
Sbjct: 71 VGSDNSNQSSPRLRLPSPSMDKIDRINRPGWKRNSLTPRTTVFPCPGCEHDVDLGERGIN 130
Query: 91 GLQRNLLVENIIDIYKQE-----------CSSRPLQ-----------------KGSHP-- 120
GL RN +E I++ Y+Q C P + K HP
Sbjct: 131 GLFRNFTLETIVERYRQAARAATAIMCDLCKPPPQESTKSCMDCSASYCNECFKIHHPWG 190
Query: 121 --------------------MCKEHEDEKINIYCLTCEVPTCSMCKVFGIHKACEVAPLQ 160
MC EHE E+IN+YC C P C +CK+ G H V +
Sbjct: 191 TIKAQHEYVGPTTNFRPKILMCPEHETERINMYCELCRRPVCHLCKLGGNHANHRVTTMS 250
Query: 161 SVFQGQKTELNNCISMLVAGNDRVQTIITQLEDSRRVTKENSHQVKEELSQKFDTLYAIL 220
S ++ K +L+ I L+ +V++ I++L + T+ N + KEE F+ L+ +L
Sbjct: 251 SAYKTLKEKLSKDIDYLIGKESQVKSQISELNLLMKETECNGERAKEEAITHFEKLFEVL 310
Query: 221 DEKKSELLQRITQEQEKKLSFIEALIQQYQEQLDKSTKLVETAIQSLDEPGGATFLLTAK 280
+E+KS +L+ I ++ +L + +++YQ L+ + LV A + L E + F+ TAK
Sbjct: 311 EERKSSVLKAIDSSKKLRLDKFQTQMEEYQGLLE-NNGLVGYAQEVLKETDQSCFVQTAK 369
Query: 281 QLIKSIVEASK 291
QL I +A++
Sbjct: 370 QLHLRIQKATE 380
>gi|223890259 midline 2 isoform 2 [Homo sapiens]
Length = 705
Score = 117 bits (294), Expect = 1e-26
Identities = 95/396 (23%), Positives = 167/396 (42%), Gaps = 79/396 (19%)
Query: 14 MENLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQAANPYWTSRGSSVSMSGGRF 73
ME LE +L CPICLE+F P+ +LPC H+LC CA+ I ++ S G S+ F
Sbjct: 21 METLESELTCPICLELFEDPL-LLPCAHSLCFSCAHRILVSS----CSSGESIEPITA-F 74
Query: 74 RCPTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRP-------------------L 114
+CPTCR+ + ++ G+ GL+RN+ ++NIID +++ S P
Sbjct: 75 QCPTCRYVISLNHRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSESRRERTYRPTTAMSS 134
Query: 115 QKGSHPMCKEHEDEKINIYCLTCEVPTC-------------------------------- 142
++ + C++ C+TCEV C
Sbjct: 135 ERIACQFCEQDPPRDAVKTCITCEVSYCDRCLRATHPNKKPFTSHRLVEPVPDTHLRGIT 194
Query: 143 ---------------------SMCKVFGIHKACEVAPLQSVFQGQKTELNNCISMLVAGN 181
++CK+ G H+ +VA L F+ K L ++ LV N
Sbjct: 195 CLDHENEKVNMYCVSDDQLICALCKLVGRHRDHQVASLNDRFEKLKQTLEMNLTNLVKRN 254
Query: 182 DRVQTIITQLEDSRRVTKENSHQVKEELSQKFDTLYAILDEKKSELLQRITQEQEKKLSF 241
++ + +L + + N+ + +L ++ D L I+ ++K + +I + + KL
Sbjct: 255 SELENQMAKLIQICQQVEVNTAMHEAKLMEECDELVEIIQQRKQMIAVKIKETKVMKLRK 314
Query: 242 IEALIQQYQEQLDKSTKLVETAIQSLDEPGGATFLLTAKQLIKSIVEASKGCQLGKTEQG 301
+ + ++ L++ST L+ A L E A FL +AK + + + A+ Q+ +
Sbjct: 315 LAQQVANCRQCLERSTVLINQAEHILKENDQARFLQSAKNIAERVAMATASSQVLIPDIN 374
Query: 302 FEN-MDFFTLDLEHIADALRAIDFGTDEEEEEFIEE 336
F + + F LD L +D+ T EE
Sbjct: 375 FNDAFENFALDFSREKKLLEGLDYLTAPNPPSIREE 410
>gi|223890257 midline 2 isoform 1 [Homo sapiens]
Length = 735
Score = 117 bits (294), Expect = 1e-26
Identities = 95/396 (23%), Positives = 167/396 (42%), Gaps = 79/396 (19%)
Query: 14 MENLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQAANPYWTSRGSSVSMSGGRF 73
ME LE +L CPICLE+F P+ +LPC H+LC CA+ I ++ S G S+ F
Sbjct: 21 METLESELTCPICLELFEDPL-LLPCAHSLCFSCAHRILVSS----CSSGESIEPITA-F 74
Query: 74 RCPTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRP-------------------L 114
+CPTCR+ + ++ G+ GL+RN+ ++NIID +++ S P
Sbjct: 75 QCPTCRYVISLNHRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSESRRERTYRPTTAMSS 134
Query: 115 QKGSHPMCKEHEDEKINIYCLTCEVPTC-------------------------------- 142
++ + C++ C+TCEV C
Sbjct: 135 ERIACQFCEQDPPRDAVKTCITCEVSYCDRCLRATHPNKKPFTSHRLVEPVPDTHLRGIT 194
Query: 143 ---------------------SMCKVFGIHKACEVAPLQSVFQGQKTELNNCISMLVAGN 181
++CK+ G H+ +VA L F+ K L ++ LV N
Sbjct: 195 CLDHENEKVNMYCVSDDQLICALCKLVGRHRDHQVASLNDRFEKLKQTLEMNLTNLVKRN 254
Query: 182 DRVQTIITQLEDSRRVTKENSHQVKEELSQKFDTLYAILDEKKSELLQRITQEQEKKLSF 241
++ + +L + + N+ + +L ++ D L I+ ++K + +I + + KL
Sbjct: 255 SELENQMAKLIQICQQVEVNTAMHEAKLMEECDELVEIIQQRKQMIAVKIKETKVMKLRK 314
Query: 242 IEALIQQYQEQLDKSTKLVETAIQSLDEPGGATFLLTAKQLIKSIVEASKGCQLGKTEQG 301
+ + ++ L++ST L+ A L E A FL +AK + + + A+ Q+ +
Sbjct: 315 LAQQVANCRQCLERSTVLINQAEHILKENDQARFLQSAKNIAERVAMATASSQVLIPDIN 374
Query: 302 FEN-MDFFTLDLEHIADALRAIDFGTDEEEEEFIEE 336
F + + F LD L +D+ T EE
Sbjct: 375 FNDAFENFALDFSREKKLLEGLDYLTAPNPPSIREE 410
>gi|27436877 tripartite motif-containing 59 [Homo sapiens]
Length = 403
Score = 101 bits (251), Expect = 1e-21
Identities = 76/276 (27%), Positives = 118/276 (42%), Gaps = 38/276 (13%)
Query: 14 MENLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQAANPYWTSRGSSVSMSGGRF 73
M N E++L CPIC +F P V LPC H CR C +I QA+ ++ R + +
Sbjct: 1 MHNFEEELTCPICYSIFEDPRV-LPCSHTFCRNCLENILQASGNFYIWRPLRIPL----- 54
Query: 74 RCPTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHP---MCKEHEDEKI 130
+CP CR + G+ L N + II+ Y+QE HP C EH + +
Sbjct: 55 KCPNCRSITEIAPTGIESLPVNFALRAIIEKYQQE---------DHPDIVTCPEHYRQPL 105
Query: 131 NIYCLTCEVPTCSMCKVFGIHKACEVAPLQSVFQGQKTELNNCISMLVAGNDRVQTIITQ 190
N+YCL + C C G H + LQS + +K + L D T +T
Sbjct: 106 NVYCLLDKKLVCGHCLTIGQHHGHPIDDLQSAYLKEKDTPQKLLEQL---TDTHWTDLTH 162
Query: 191 LEDSRRVTKENSHQV----KEELSQKFDTLYAILDEKKSELLQRITQEQEKKLSFIEALI 246
L + + K +S ++ KE + Q F L L++KK L + +
Sbjct: 163 LIEKLKEQKSHSEKMIQGDKEAVLQYFKELNDTLEQKKKSFLTALCDVG-------NLIN 215
Query: 247 QQYQEQLDKSTKLVETAIQ------SLDEPGGATFL 276
Q+Y Q+++ ++ E ++ SL E FL
Sbjct: 216 QEYTPQIERMKEIREQQLELMALTISLQEESPLKFL 251
>gi|55953112 ret finger protein 2 isoform 2 [Homo sapiens]
Length = 410
Score = 99.4 bits (246), Expect = 4e-21
Identities = 72/255 (28%), Positives = 117/255 (45%), Gaps = 35/255 (13%)
Query: 14 MENLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQAA--NPYWTSRGSSVSMSGG 71
ME LE+ L CPIC +F P V LPC HN C+KC I + + N W
Sbjct: 4 MELLEEDLTCPICCSLFDDPRV-LPCSHNFCKKCLEGILEGSVRNSLWRP---------A 53
Query: 72 RFRCPTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHPMCKEHEDEKIN 131
F+CPTCR E G+ LQ N ++ I++ Y + S + P+CK H + +N
Sbjct: 54 PFKCPTCRKET--SATGINSLQVNYSLKGIVEKYNKIKISPKM-----PVCKGHLGQPLN 106
Query: 132 IYCLTCEVPTCSMCKVFGIHKACEVAPLQSVFQGQKTELNNCISMLVAGN-----DRVQT 186
I+CLT C +C G H ++ + ++ + R+ T
Sbjct: 107 IFCLTDMQLICGICATRGEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDT 166
Query: 187 IITQLEDSRRVTKENSHQVKEELSQKFDTLYAILDEKKSELLQRITQEQEKKLSFIEALI 246
+ T S ++ ++S +VKE F+ L LD+KK+E+L + + KL A++
Sbjct: 167 LETSKRKSLQLLTKDSDKVKE----FFEKLQHTLDQKKNEIL---SDFETMKL----AVM 215
Query: 247 QQYQEQLDKSTKLVE 261
Q Y +++K +++
Sbjct: 216 QAYDPEINKLNTILQ 230
>gi|47132524 ret finger protein 2 isoform 1 [Homo sapiens]
Length = 407
Score = 99.4 bits (246), Expect = 4e-21
Identities = 72/255 (28%), Positives = 117/255 (45%), Gaps = 35/255 (13%)
Query: 14 MENLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQAA--NPYWTSRGSSVSMSGG 71
ME LE+ L CPIC +F P V LPC HN C+KC I + + N W
Sbjct: 1 MELLEEDLTCPICCSLFDDPRV-LPCSHNFCKKCLEGILEGSVRNSLWRP---------A 50
Query: 72 RFRCPTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHPMCKEHEDEKIN 131
F+CPTCR E G+ LQ N ++ I++ Y + S + P+CK H + +N
Sbjct: 51 PFKCPTCRKET--SATGINSLQVNYSLKGIVEKYNKIKISPKM-----PVCKGHLGQPLN 103
Query: 132 IYCLTCEVPTCSMCKVFGIHKACEVAPLQSVFQGQKTELNNCISMLVAGN-----DRVQT 186
I+CLT C +C G H ++ + ++ + R+ T
Sbjct: 104 IFCLTDMQLICGICATRGEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDT 163
Query: 187 IITQLEDSRRVTKENSHQVKEELSQKFDTLYAILDEKKSELLQRITQEQEKKLSFIEALI 246
+ T S ++ ++S +VKE F+ L LD+KK+E+L + + KL A++
Sbjct: 164 LETSKRKSLQLLTKDSDKVKE----FFEKLQHTLDQKKNEIL---SDFETMKL----AVM 212
Query: 247 QQYQEQLDKSTKLVE 261
Q Y +++K +++
Sbjct: 213 QAYDPEINKLNTILQ 227
>gi|16445412 ret finger protein 2 isoform 1 [Homo sapiens]
Length = 407
Score = 99.4 bits (246), Expect = 4e-21
Identities = 72/255 (28%), Positives = 117/255 (45%), Gaps = 35/255 (13%)
Query: 14 MENLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQAA--NPYWTSRGSSVSMSGG 71
ME LE+ L CPIC +F P V LPC HN C+KC I + + N W
Sbjct: 1 MELLEEDLTCPICCSLFDDPRV-LPCSHNFCKKCLEGILEGSVRNSLWRP---------A 50
Query: 72 RFRCPTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHPMCKEHEDEKIN 131
F+CPTCR E G+ LQ N ++ I++ Y + S + P+CK H + +N
Sbjct: 51 PFKCPTCRKET--SATGINSLQVNYSLKGIVEKYNKIKISPKM-----PVCKGHLGQPLN 103
Query: 132 IYCLTCEVPTCSMCKVFGIHKACEVAPLQSVFQGQKTELNNCISMLVAGN-----DRVQT 186
I+CLT C +C G H ++ + ++ + R+ T
Sbjct: 104 IFCLTDMQLICGICATRGEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDT 163
Query: 187 IITQLEDSRRVTKENSHQVKEELSQKFDTLYAILDEKKSELLQRITQEQEKKLSFIEALI 246
+ T S ++ ++S +VKE F+ L LD+KK+E+L + + KL A++
Sbjct: 164 LETSKRKSLQLLTKDSDKVKE----FFEKLQHTLDQKKNEIL---SDFETMKL----AVM 212
Query: 247 QQYQEQLDKSTKLVE 261
Q Y +++K +++
Sbjct: 213 QAYDPEINKLNTILQ 227
>gi|47132521 ret finger protein 2 isoform 1 [Homo sapiens]
Length = 407
Score = 99.4 bits (246), Expect = 4e-21
Identities = 72/255 (28%), Positives = 117/255 (45%), Gaps = 35/255 (13%)
Query: 14 MENLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQAA--NPYWTSRGSSVSMSGG 71
ME LE+ L CPIC +F P V LPC HN C+KC I + + N W
Sbjct: 1 MELLEEDLTCPICCSLFDDPRV-LPCSHNFCKKCLEGILEGSVRNSLWRP---------A 50
Query: 72 RFRCPTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHPMCKEHEDEKIN 131
F+CPTCR E G+ LQ N ++ I++ Y + S + P+CK H + +N
Sbjct: 51 PFKCPTCRKET--SATGINSLQVNYSLKGIVEKYNKIKISPKM-----PVCKGHLGQPLN 103
Query: 132 IYCLTCEVPTCSMCKVFGIHKACEVAPLQSVFQGQKTELNNCISMLVAGN-----DRVQT 186
I+CLT C +C G H ++ + ++ + R+ T
Sbjct: 104 IFCLTDMQLICGICATRGEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDT 163
Query: 187 IITQLEDSRRVTKENSHQVKEELSQKFDTLYAILDEKKSELLQRITQEQEKKLSFIEALI 246
+ T S ++ ++S +VKE F+ L LD+KK+E+L + + KL A++
Sbjct: 164 LETSKRKSLQLLTKDSDKVKE----FFEKLQHTLDQKKNEIL---SDFETMKL----AVM 212
Query: 247 QQYQEQLDKSTKLVE 261
Q Y +++K +++
Sbjct: 213 QAYDPEINKLNTILQ 227
>gi|134288906 tripartite motif-containing 67 [Homo sapiens]
Length = 783
Score = 93.6 bits (231), Expect = 2e-19
Identities = 57/205 (27%), Positives = 101/205 (49%)
Query: 120 PMCKEHEDEKINIYCLTCEVPTCSMCKVFGIHKACEVAPLQSVFQGQKTELNNCISMLVA 179
P C EHE E ++YC++C P C +C G H EV PL ++++ K +L+ ++ +
Sbjct: 301 PTCPEHEMENYSMYCVSCRTPVCYLCLEEGRHAKHEVKPLGAMWKQHKAQLSQALNGVSD 360
Query: 180 GNDRVQTIITQLEDSRRVTKENSHQVKEELSQKFDTLYAILDEKKSELLQRITQEQEKKL 239
+ + QL++ + +EN + L + D L L +K++LL ++T+E+E KL
Sbjct: 361 KAKEAKEFLVQLKNILQQIQENGLDYEACLVAQCDALVDALTRQKAKLLTKVTKEREHKL 420
Query: 240 SFIEALIQQYQEQLDKSTKLVETAIQSLDEPGGATFLLTAKQLIKSIVEASKGCQLGKTE 299
+ I +L +ST L+E ++ + E + FL + LIK + + + G E
Sbjct: 421 KMVWDQINHCTLKLRQSTGLMEYCLEVIKENDPSGFLQISDALIKRVQVSQEQWVKGALE 480
Query: 300 QGFENMDFFTLDLEHIADALRAIDF 324
TLD E + A+ +DF
Sbjct: 481 PKVSAEFDLTLDSEPLLQAIHQLDF 505
Score = 48.5 bits (114), Expect = 9e-06
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Query: 64 SSVSMSGGRFRCPTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSH---- 119
SS+S S CP C +D G+ G QRN L+E I+ Y+Q + P +
Sbjct: 148 SSLSSSSSSITCPQCHRSASLDHRGLRGFQRNRLLEAIVQRYQQGRGAVPGTSAAAAVAI 207
Query: 120 -PMCKEHEDEKINIYCLTCEVPTCSMCKV 147
+C E C C+V CS C++
Sbjct: 208 CQLCDRTPPEPAATLCEQCDVLYCSACQL 236
Score = 43.9 bits (102), Expect = 2e-04
Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 17 LEKQLICPICLEMFTKPVVILPCQHNLCRKCANDI 51
+E++L CP+C +F +P+ ILPC HN+C CA I
Sbjct: 1 MEEELKCPVCGSLFREPI-ILPCSHNVCLPCARTI 34
>gi|194248081 tripartite motif-containing 2 isoform 2 [Homo sapiens]
Length = 744
Score = 90.5 bits (223), Expect = 2e-18
Identities = 72/290 (24%), Positives = 119/290 (41%), Gaps = 34/290 (11%)
Query: 14 MENLEKQ-LICPICLEMFTKPVVILPCQHNLCRKCANDIFQAANPYWTSRGSSVSMSGGR 72
+ ++KQ LIC ICLE + P V LPC H C +C + A S+++S
Sbjct: 13 VRQIDKQFLICSICLERYKNPKV-LPCLHTFCERCLQNYIPA---------HSLTLS--- 59
Query: 73 FRCPTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSR-----------PLQKGSHPM 121
CP CR I+ GV LQ N + N++D+ ++ S + G
Sbjct: 60 --CPVCRQTSILPEKGVAALQNNFFITNLMDVLQRTPGSNAEESSILETVTAVAAGKPLS 117
Query: 122 CKEHEDEKINIYCLTCEVPTCSMCKVFGIHKACEVAPLQSVFQGQKTELNNCISMLVAGN 181
C H+ + YC +CE C C G H PL+ V + K L L A N
Sbjct: 118 CPNHDGNVMEFYCQSCETAMCREC-TEGEHAEHPTVPLKDVVEQHKASLQ---VQLDAVN 173
Query: 182 DRVQTIITQLEDSRRVTKENSHQ---VKEELSQKFDTLYAILDEKKSELLQRITQEQEKK 238
R+ I + L+ + + ++Q + +++ FD L L+ +KS LL + K
Sbjct: 174 KRLPEIDSALQFISEIIHQLTNQKASIVDDIHSTFDELQKTLNVRKSVLLMELEVNYGLK 233
Query: 239 LSFIEALIQQYQEQLDKSTKLVETAIQSLDEPGGATFLLTAKQLIKSIVE 288
+++ + + + Q+L+ LL KQ+ + + E
Sbjct: 234 HKVLQSQLDTLLQGQESIKSCSNFTAQALNHGTETEVLLVKKQMSEKLNE 283
>gi|194248079 tripartite motif-containing 2 isoform 1 [Homo sapiens]
Length = 771
Score = 90.5 bits (223), Expect = 2e-18
Identities = 72/290 (24%), Positives = 119/290 (41%), Gaps = 34/290 (11%)
Query: 14 MENLEKQ-LICPICLEMFTKPVVILPCQHNLCRKCANDIFQAANPYWTSRGSSVSMSGGR 72
+ ++KQ LIC ICLE + P V LPC H C +C + A S+++S
Sbjct: 40 VRQIDKQFLICSICLERYKNPKV-LPCLHTFCERCLQNYIPA---------HSLTLS--- 86
Query: 73 FRCPTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSR-----------PLQKGSHPM 121
CP CR I+ GV LQ N + N++D+ ++ S + G
Sbjct: 87 --CPVCRQTSILPEKGVAALQNNFFITNLMDVLQRTPGSNAEESSILETVTAVAAGKPLS 144
Query: 122 CKEHEDEKINIYCLTCEVPTCSMCKVFGIHKACEVAPLQSVFQGQKTELNNCISMLVAGN 181
C H+ + YC +CE C C G H PL+ V + K L L A N
Sbjct: 145 CPNHDGNVMEFYCQSCETAMCREC-TEGEHAEHPTVPLKDVVEQHKASLQ---VQLDAVN 200
Query: 182 DRVQTIITQLEDSRRVTKENSHQ---VKEELSQKFDTLYAILDEKKSELLQRITQEQEKK 238
R+ I + L+ + + ++Q + +++ FD L L+ +KS LL + K
Sbjct: 201 KRLPEIDSALQFISEIIHQLTNQKASIVDDIHSTFDELQKTLNVRKSVLLMELEVNYGLK 260
Query: 239 LSFIEALIQQYQEQLDKSTKLVETAIQSLDEPGGATFLLTAKQLIKSIVE 288
+++ + + + Q+L+ LL KQ+ + + E
Sbjct: 261 HKVLQSQLDTLLQGQESIKSCSNFTAQALNHGTETEVLLVKKQMSEKLNE 310
>gi|5730009 ret finger protein [Homo sapiens]
Length = 513
Score = 90.1 bits (222), Expect = 3e-18
Identities = 66/261 (25%), Positives = 117/261 (44%), Gaps = 22/261 (8%)
Query: 11 GNPMENLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQAANPYWTSRGSSVSMSG 70
G+ E L+++ CP+CL+ F +P++ L C HN+C C W + ++VS
Sbjct: 4 GSVAECLQQETTCPVCLQYFAEPMM-LDCGHNICCACLARC-------WGTAETNVS--- 52
Query: 71 GRFRCPTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHP-MCKEHEDEK 129
CP CR E RH ++ N + N+ + KQ + RP G +C++H E
Sbjct: 53 ----CPQCR-ETFPQRH----MRPNRHLANVTQLVKQLRTERPSGPGGEMGVCEKHR-EP 102
Query: 130 INIYCLTCEVPTCSMCKVFGIHKACEVAPLQSVFQGQKTELNNCISMLVAGNDRVQTIIT 189
+ +YC ++P C +C H+ V PL+ +G K ++ N + L D +
Sbjct: 103 LKLYCEEDQMPICVVCDRSREHRGHSVLPLEEAVEGFKEQIQNQLDHLKRVKDLKKRRRA 162
Query: 190 QLEDSRRVTKENSHQVKEELSQKFDTLYAILDEKKSELLQRITQEQEKKLSFIEALIQQY 249
Q E +R + +E++ +F+ LY L E + LL R+ + + I I Q+
Sbjct: 163 QGEQARAELLSLTQMEREKIVWEFEQLYHSLKEHEYRLLARLEELDLAIYNSINGAITQF 222
Query: 250 QEQLDKSTKLVETAIQSLDEP 270
+ + L+ + +P
Sbjct: 223 SCNISHLSSLIAQLEEKQQQP 243
>gi|32454739 tripartite motif-containing 3 [Homo sapiens]
Length = 744
Score = 89.7 bits (221), Expect = 3e-18
Identities = 65/268 (24%), Positives = 113/268 (42%), Gaps = 29/268 (10%)
Query: 11 GNPMENLEKQ-LICPICLEMFTKPVVILPCQHNLCRKCANDIFQAANPYWTSRGSSVSMS 69
G ++ ++KQ L+C ICL+ + P V LPC H C +C + A S+++S
Sbjct: 9 GPEVQPMDKQFLVCSICLDRYQCPKV-LPCLHTFCERCLQNYIPA---------QSLTLS 58
Query: 70 GGRFRCPTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHPM-------- 121
CP CR I+ GV LQ N + ++++ +Q + HP+
Sbjct: 59 -----CPVCRQTSILPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSVVAGRPL 113
Query: 122 -CKEHEDEKINIYCLTCEVPTCSMCKVFGIHKACEVAPLQSVFQGQKTELNNCISMLVAG 180
C HE + + YC CE C C+ G H+ L+ V + K L + +
Sbjct: 114 SCPNHEGKTMEFYCEACETAMCGECRA-GEHREHGTVLLRDVVEQHKAALQRQLEAVRGR 172
Query: 181 NDRVQTIITQLEDSRRVTKENSHQVKEELSQKFDTLYAILDEKKSEL---LQRITQEQEK 237
++ I + + +E + ++S F+ L L ++K L L+ I ++K
Sbjct: 173 LPQLSAAIALVGGISQQLQERKAEALAQISAAFEDLEQALQQRKQALVSDLETICGAKQK 232
Query: 238 KLSFIEALIQQYQEQLDKSTKLVETAIQ 265
L ++Q QE + S E A++
Sbjct: 233 VLQSQLDTLRQGQEHIGSSCSFAEQALR 260
>gi|32454737 tripartite motif-containing 3 [Homo sapiens]
Length = 744
Score = 89.7 bits (221), Expect = 3e-18
Identities = 65/268 (24%), Positives = 113/268 (42%), Gaps = 29/268 (10%)
Query: 11 GNPMENLEKQ-LICPICLEMFTKPVVILPCQHNLCRKCANDIFQAANPYWTSRGSSVSMS 69
G ++ ++KQ L+C ICL+ + P V LPC H C +C + A S+++S
Sbjct: 9 GPEVQPMDKQFLVCSICLDRYQCPKV-LPCLHTFCERCLQNYIPA---------QSLTLS 58
Query: 70 GGRFRCPTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHPM-------- 121
CP CR I+ GV LQ N + ++++ +Q + HP+
Sbjct: 59 -----CPVCRQTSILPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSVVAGRPL 113
Query: 122 -CKEHEDEKINIYCLTCEVPTCSMCKVFGIHKACEVAPLQSVFQGQKTELNNCISMLVAG 180
C HE + + YC CE C C+ G H+ L+ V + K L + +
Sbjct: 114 SCPNHEGKTMEFYCEACETAMCGECRA-GEHREHGTVLLRDVVEQHKAALQRQLEAVRGR 172
Query: 181 NDRVQTIITQLEDSRRVTKENSHQVKEELSQKFDTLYAILDEKKSEL---LQRITQEQEK 237
++ I + + +E + ++S F+ L L ++K L L+ I ++K
Sbjct: 173 LPQLSAAIALVGGISQQLQERKAEALAQISAAFEDLEQALQQRKQALVSDLETICGAKQK 232
Query: 238 KLSFIEALIQQYQEQLDKSTKLVETAIQ 265
L ++Q QE + S E A++
Sbjct: 233 VLQSQLDTLRQGQEHIGSSCSFAEQALR 260
>gi|145275183 tripartite motif protein 34 isoform 3 [Homo sapiens]
Length = 270
Score = 88.6 bits (218), Expect = 8e-18
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 22/239 (9%)
Query: 16 NLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQAANPYWTSRGSSVSMSGGRFRC 75
N+++++ CPICLE+ T+P+ L C H+LCR C S +V+ GG+ C
Sbjct: 8 NVQEEVTCPICLELLTEPLS-LDCGHSLCRACIT----------VSNKEAVTSMGGKSSC 56
Query: 76 PTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHPMCKEHEDEKINIYCL 135
P C + LQ N + NI++ K E P +C +H EK+ ++C
Sbjct: 57 PVCGISYSFEH-----LQANQHLANIVERLK-EVKLSPDNGKKRDLC-DHHGEKLLLFCK 109
Query: 136 TCEVPTCSMCKVFGIHKACEVAPLQSVFQGQKTELNNCISMLVAGNDRVQTIITQLEDSR 195
C +C+ H+ + VF+ + +L + L + + + + + +
Sbjct: 110 EDRKVICWLCERSQEHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEK 169
Query: 196 RVTKENSHQVKEELSQKFDTLYAILDEKKSELLQRITQEQEKKL-SFIEA---LIQQYQ 250
K ++ + +FD L +IL+ ++ LQR+ +E++K L F EA L+QQ Q
Sbjct: 170 TSWKYQVQTERQRIQTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQ 228
>gi|51477687 tripartite motif protein 34 isoform 1 [Homo sapiens]
Length = 488
Score = 88.6 bits (218), Expect = 8e-18
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 22/239 (9%)
Query: 16 NLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQAANPYWTSRGSSVSMSGGRFRC 75
N+++++ CPICLE+ T+P+ L C H+LCR C S +V+ GG+ C
Sbjct: 8 NVQEEVTCPICLELLTEPLS-LDCGHSLCRACIT----------VSNKEAVTSMGGKSSC 56
Query: 76 PTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHPMCKEHEDEKINIYCL 135
P C + LQ N + NI++ K E P +C +H EK+ ++C
Sbjct: 57 PVCGISYSFEH-----LQANQHLANIVERLK-EVKLSPDNGKKRDLC-DHHGEKLLLFCK 109
Query: 136 TCEVPTCSMCKVFGIHKACEVAPLQSVFQGQKTELNNCISMLVAGNDRVQTIITQLEDSR 195
C +C+ H+ + VF+ + +L + L + + + + + +
Sbjct: 110 EDRKVICWLCERSQEHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEK 169
Query: 196 RVTKENSHQVKEELSQKFDTLYAILDEKKSELLQRITQEQEKKL-SFIEA---LIQQYQ 250
K ++ + +FD L +IL+ ++ LQR+ +E++K L F EA L+QQ Q
Sbjct: 170 TSWKYQVQTERQRIQTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQ 228
>gi|18087807 tripartite motif protein 34 isoform 1 [Homo sapiens]
Length = 488
Score = 88.6 bits (218), Expect = 8e-18
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 22/239 (9%)
Query: 16 NLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQAANPYWTSRGSSVSMSGGRFRC 75
N+++++ CPICLE+ T+P+ L C H+LCR C S +V+ GG+ C
Sbjct: 8 NVQEEVTCPICLELLTEPLS-LDCGHSLCRACIT----------VSNKEAVTSMGGKSSC 56
Query: 76 PTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHPMCKEHEDEKINIYCL 135
P C + LQ N + NI++ K E P +C +H EK+ ++C
Sbjct: 57 PVCGISYSFEH-----LQANQHLANIVERLK-EVKLSPDNGKKRDLC-DHHGEKLLLFCK 109
Query: 136 TCEVPTCSMCKVFGIHKACEVAPLQSVFQGQKTELNNCISMLVAGNDRVQTIITQLEDSR 195
C +C+ H+ + VF+ + +L + L + + + + + +
Sbjct: 110 EDRKVICWLCERSQEHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEK 169
Query: 196 RVTKENSHQVKEELSQKFDTLYAILDEKKSELLQRITQEQEKKL-SFIEA---LIQQYQ 250
K ++ + +FD L +IL+ ++ LQR+ +E++K L F EA L+QQ Q
Sbjct: 170 TSWKYQVQTERQRIQTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQ 228
>gi|217035095 tripartite motif-containing 62 [Homo sapiens]
Length = 475
Score = 88.6 bits (218), Expect = 8e-18
Identities = 69/283 (24%), Positives = 127/283 (44%), Gaps = 35/283 (12%)
Query: 16 NLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQAANPYWTSRGSSVSMSGGRFRC 75
+L+ +L+C ICL ++ PV L C+H CR+C + +W + + G C
Sbjct: 4 SLKDELLCSICLSIYQDPVS-LGCEHYFCRRCITE-------HWVRQEAQ-----GARDC 50
Query: 76 PTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPL------QKGSHPMCKEHEDEK 129
P CR L +L + NI++ Y SS PL ++ + P C+ H+ K
Sbjct: 51 PECRRTFAEP-----ALAPSLKLANIVERY----SSFPLDAILNARRAARP-CQAHD--K 98
Query: 130 INIYCLTCEVPTCSMCKVFGIHKACEVAPLQSVFQGQKTELNNCISMLVAGNDRVQTIIT 189
+ ++CLT C C +H+ +V + F + EL + + L +
Sbjct: 99 VKLFCLTDRALLCFFCDEPALHEQHQVTGIDDAFDELQRELKDQLQALQDSEREHTEALQ 158
Query: 190 QLEDSRRVTKENSHQVKEELSQKFDTLYAILDEKKSELLQRITQEQEKKLSFIEALIQQY 249
L+ TK ++ ++ + + F+ L+ +L E++ +L+ + + + L+ IE +Q+Y
Sbjct: 159 LLKRQLAETKSSTKSLRTTIGEAFERLHRLLRERQKAMLEELEADTARTLTDIEQKVQRY 218
Query: 250 QEQLDKSTKLVETAIQSLDEPGGATFLLTAKQLIKSIVEASKG 292
+QL K + + + L E TFL + S+ E KG
Sbjct: 219 SQQLRKVQEGAQILQERLAETDRHTFLAG----VASLSERLKG 257
>gi|51477690 tripartite motif-containing 6 and tripartite
motif-containing 34 [Homo sapiens]
Length = 842
Score = 88.6 bits (218), Expect = 8e-18
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 22/239 (9%)
Query: 16 NLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQAANPYWTSRGSSVSMSGGRFRC 75
N+++++ CPICLE+ T+P+ L C H+LCR C S +V+ GG+ C
Sbjct: 362 NVQEEVTCPICLELLTEPLS-LDCGHSLCRACIT----------VSNKEAVTSMGGKSSC 410
Query: 76 PTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHPMCKEHEDEKINIYCL 135
P C + LQ N + NI++ K E P +C +H EK+ ++C
Sbjct: 411 PVCGISYSFEH-----LQANQHLANIVERLK-EVKLSPDNGKKRDLC-DHHGEKLLLFCK 463
Query: 136 TCEVPTCSMCKVFGIHKACEVAPLQSVFQGQKTELNNCISMLVAGNDRVQTIITQLEDSR 195
C +C+ H+ + VF+ + +L + L + + + + + +
Sbjct: 464 EDRKVICWLCERSQEHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEK 523
Query: 196 RVTKENSHQVKEELSQKFDTLYAILDEKKSELLQRITQEQEKKL-SFIEA---LIQQYQ 250
K ++ + +FD L +IL+ ++ LQR+ +E++K L F EA L+QQ Q
Sbjct: 524 TSWKYQVQTERQRIQTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQ 582
Score = 65.1 bits (157), Expect = 9e-11
Identities = 63/285 (22%), Positives = 119/285 (41%), Gaps = 25/285 (8%)
Query: 16 NLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQAANPYWTSRGSSVSMSGGRFRC 75
++ +++ CPICLE+ T+P+ I C H+ C+ C R S + G R C
Sbjct: 36 DIREEVTCPICLELLTEPLSI-DCGHSFCQACITP---------NGRESVIGQEGER-SC 84
Query: 76 PTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHPMCKEHEDEKINIYCL 135
P C+ + L+ N + NI+ + E P ++ +C +H EK+ ++C
Sbjct: 85 PVCQTS-----YQPGNLRPNRHLANIVRRLR-EVVLGPGKQLKAVLCADH-GEKLQLFCQ 137
Query: 136 TCEVPTCSMCKVFGIHKACEVAPLQSVFQGQKTELNNCISMLVAGNDRVQTIITQLEDSR 195
C +C+ H+ ++ V Q + + + L + + + + +
Sbjct: 138 EDGKVICWLCERSQEHRGHHTFLVEEVAQEYQEKFQESLKKLKNEEQEAEKLTAFIREKK 197
Query: 196 RVTKENSHQVKEELSQKFDTLYAILDEKKSELLQRITQEQEKKLSFIEALIQQYQEQLDK 255
K + + +F+ L ILD + L+++ QE++K L IE + + L
Sbjct: 198 TSWKNQMEPERCRIQTEFNQLRNILDRVEQRELKKLEQEEKKGLRIIE----EAENDLVH 253
Query: 256 STKLVETAIQSLDEP-GGATFLLTAKQLIKSIVEASKGCQLGKTE 299
T+ + I L+ G+T L Q + + E S+ L K E
Sbjct: 254 QTQSLRELISDLERRCQGSTMELL--QDVSDVTERSEFWTLRKPE 296
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.133 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,689,464
Number of Sequences: 37866
Number of extensions: 643826
Number of successful extensions: 12755
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 339
Number of HSP's successfully gapped in prelim test: 429
Number of HSP's that attempted gapping in prelim test: 7484
Number of HSP's gapped (non-prelim): 3691
length of query: 353
length of database: 18,247,518
effective HSP length: 103
effective length of query: 250
effective length of database: 14,347,320
effective search space: 3586830000
effective search space used: 3586830000
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.