Guide to the Human Genome
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Name: ODZ2 Sequence: fasta or formatted (2765aa) NCBI GI: 170016091
Description:

odz, odd Oz/ten-m homolog 2

Referenced in:

Additional Brain Proteins
Gene Structure

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1        141           3
 C cysteine            2.8         78           2
 D aspartate           6.1        169           3
 E glutamate           4.6        128           2
 F phenylalanine       3.1         85           2
 G glycine             8.2        227           2
 H histidine           2.7         75           3
 I isoleucine          5.1        141           3
 K lysine              4.1        113           2
 L leucine             8.9        246           3
 M methionine          2.0         56           1
 N asparagine          5.4        148           2
 P proline             5.0        137           3
 Q glutamine           3.9        107           2
 R arginine            5.6        154           3
 S serine              9.3        258           4
 T threonine           6.3        174           3
 V valine              6.1        170           2
 W tryptophan          1.3         35           1
 Y tyrosine            4.4        123           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   odz, odd Oz/ten-m homolog 2 
ODZ3                  0.682   odz, odd Oz/ten-m homolog 3 
ODZ4                  0.620   odz, odd Oz/ten-m homolog 4 
ODZ1                  0.578   odz, odd Oz/ten-m homolog 1 isoform 1 
ODZ1                  0.577   odz, odd Oz/ten-m homolog 1 isoform 2 
ODZ1                  0.575   odz, odd Oz/ten-m homolog 1 isoform 3 
TNXB                  0.037   tenascin XB isoform 1 precursor 
TNC                   0.037   tenascin C precursor 
VWDE                  0.023   von Willebrand factor D and EGF domains 
NOTCH3                0.022   Notch homolog 3 
NOTCH1                0.022   notch1 preproprotein 
NOTCH2                0.022   notch 2 preproprotein 
JAG1                  0.021   jagged 1 precursor 
PEAR1                 0.020   platelet endothelial aggregation receptor 1 
MEGF11                0.020   multiple EGF-like-domains 11 
ITGBL1                0.019   integrin, beta-like 1 (with EGF-like repeat domains) ...
JAG2                  0.019   jagged 2 isoform b precursor 
JAG2                  0.019   jagged 2 isoform a precursor 
TNR                   0.019   tenascin R 
MEGF10                0.019   multiple EGF-like-domains 10 
SCARF1                0.018   scavenger receptor class F, member 1 isoform 3 precu...
SCARF1                0.018   scavenger receptor class F, member 1 isoform 1 precu...
WIF1                  0.018   WNT inhibitory factor 1 precursor 
EYS                   0.018   eyes shut homolog isoform 1 
NOTCH4                0.018   notch4 preproprotein 
SNED1                 0.018   6720455I24Rik homolog 
CRB2                  0.017   crumbs homolog 2 
CRB1                  0.017   crumbs homolog 1 precursor 
SCARF1                0.017   scavenger receptor class F, member 1 isoform 5 prec...
MEGF6                 0.017   EGF-like-domain, multiple 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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