Guide to the Human Genome
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Name: MTRR Sequence: fasta or formatted (725aa) NCBI GI: 169790956
Description:

methionine synthase reductase isoform 2

Referenced in:

Cytochrome P450 Enzymes
Vitamin Pathways, Coenzymes, and 1-Carbon Metabolism

Other entries for this name:
alt prot [698aa] methionine synthase reductase isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         57           2
 C cysteine            2.5         18           1
 D aspartate           5.7         41           2
 E glutamate           6.5         47           3
 F phenylalanine       4.4         32           2
 G glycine             5.7         41           2
 H histidine           3.4         25           1
 I isoleucine          5.0         36           2
 K lysine              5.7         41           3
 L leucine            12.1         88           3
 M methionine          0.8          6           1
 N asparagine          2.3         17           1
 P proline             5.2         38           2
 Q glutamine           5.4         39           2
 R arginine            4.7         34           2
 S serine              8.0         58           3
 T threonine           4.7         34           2
 V valine              7.2         52           4
 W tryptophan          0.8          6           1
 Y tyrosine            2.1         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   methionine synthase reductase isoform 2 
MTRR                  0.965   methionine synthase reductase isoform 1 
NOS3                  0.136   nitric oxide synthase 3 isoform 1 
NOS1                  0.135   nitric oxide synthase 1, neuronal 
POR                   0.131   cytochrome P450 reductase 
NOS2                  0.114   nitric oxide synthase 2A 
NDOR1                 0.109   NADPH dependent diflavin oxidoreductase 1 isoform a...
NDOR1                 0.109   NADPH dependent diflavin oxidoreductase 1 isoform b [...
NDOR1                 0.099   NADPH dependent diflavin oxidoreductase 1 isoform c...
NDOR1                 0.084   NADPH dependent diflavin oxidoreductase 1 isoform d...
TYW1                  0.015   radical S-adenosyl methionine and flavodoxin domains...
CMYA5                 0.010   cardiomyopathy associated 5 
NOS3                  0.010   nitric oxide synthase 3 isoform 3 
NOS3                  0.009   nitric oxide synthase 3 isoform 4 
NOS3                  0.009   nitric oxide synthase 3 isoform 2 
GLCCI1                0.009   glucocorticoid induced transcript 1 
SETX                  0.006   senataxin 
PROL1                 0.005   proline rich, lacrimal 1 
CMAS                  0.005   cytidine monophospho-N-acetylneuraminic acid syntheta...
SDHA                  0.004   succinate dehydrogenase complex, subunit A, flavopr...
KIAA1549              0.004   hypothetical protein LOC57670 
FAM54B                0.004   hypothetical protein LOC56181 isoform a 
FAM54B                0.004   hypothetical protein LOC56181 isoform a 
FAM54B                0.004   hypothetical protein LOC56181 isoform a 
OXNAD1                0.004   oxidoreductase NAD-binding domain containing 1 [Homo...
IKBKAP                0.004   inhibitor of kappa light polypeptide gene enhancer i...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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