Guide to the Human Genome
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Name: KLRK1 Sequence: fasta or formatted (216aa) NCBI GI: 169234653
Description:

NKG2-D type II integral membrane protein

Referenced in:

HLA and Related Proteins
Lectin Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.7          8           1
 C cysteine            5.6         12           2
 D aspartate           3.2          7           1
 E glutamate           5.1         11           1
 F phenylalanine       5.6         12           3
 G glycine             4.2          9           1
 H histidine           1.9          4           1
 I isoleucine          6.5         14           2
 K lysine              6.5         14           2
 L leucine             6.9         15           2
 M methionine          3.7          8           1
 N asparagine          6.5         14           2
 P proline             3.7          8           1
 Q glutamine           5.1         11           1
 R arginine            4.2          9           2
 S serine             10.6         23           2
 T threonine           3.7          8           1
 V valine              4.6         10           2
 W tryptophan          4.2          9           1
 Y tyrosine            4.6         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   NKG2-D type II integral membrane protein 
CLEC12B               0.154   C-type lectin domain family 12, member B isoform 1 ...
KLRD1                 0.145   killer cell lectin-like receptor subfamily D, membe...
KLRD1                 0.145   killer cell lectin-like receptor subfamily D, member ...
KLRD1                 0.145   killer cell lectin-like receptor subfamily D, member ...
CLEC12B               0.138   C-type lectin domain family 12, member B isoform 2 ...
OLR1                  0.133   oxidized low density lipoprotein (lectin-like) recept...
CLEC4M                0.133   C-type lectin domain family 4, member M isoform 11 ...
CLEC4M                0.133   C-type lectin domain family 4, member M isoform 9 [...
CLEC4M                0.133   C-type lectin domain family 4, member M isoform 7 [...
CLEC4M                0.133   C-type lectin domain family 4, member M isoform 12 ...
CLEC4M                0.133   C-type lectin domain family 4, member M isoform 2 [...
CLEC4M                0.133   C-type lectin domain family 4, member M isoform 8 [...
CLEC4M                0.133   C-type lectin domain family 4, member M isoform 1 [H...
CLEC1B                0.127   C-type lectin domain family 1, member B isoform b [...
CLEC1B                0.127   C-type lectin domain family 1, member B isoform a [...
CLEC9A                0.124   C-type lectin domain family 9, member A 
CD209                 0.118   CD209 molecule isoform 8 
CD209                 0.118   CD209 molecule isoform 3 
CD209                 0.118   CD209 molecule isoform 7 
CD209                 0.118   CD209 molecule isoform 6 
CD209                 0.118   CD209 molecule isoform 5 
CD209                 0.118   CD209 molecule isoform 1 
CD209                 0.106   CD209 molecule isoform 4 
CLEC1A                0.104   C-type lectin-like receptor-1 
KLRC1                 0.104   killer cell lectin-like receptor subfamily C, member...
KLRC1                 0.104   killer cell lectin-like receptor subfamily C, member ...
KLRG1                 0.104   killer cell lectin-like receptor subfamily G, member...
CLEC7A                0.102   dendritic cell-associated C-type lectin 1 isoform b ...
KLRC2                 0.100   killer cell lectin-like receptor subfamily C, member...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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