Guide to the Human Genome
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Search of human proteins with 169214665

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169214665 PREDICTED: hypothetical protein [Homo sapiens]
         (199 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169214978 PREDICTED: hypothetical protein [Homo sapiens]           405   e-113
gi|169214665 PREDICTED: hypothetical protein [Homo sapiens]           405   e-113
gi|169214758 PREDICTED: hypothetical protein [Homo sapiens]           401   e-112
gi|169207782 PREDICTED: hypothetical protein [Homo sapiens]            39   0.002
gi|169207076 PREDICTED: hypothetical protein [Homo sapiens]            39   0.002
gi|239748281 PREDICTED: hypothetical protein [Homo sapiens]            37   0.008
gi|239742182 PREDICTED: hypothetical protein XP_002342446 [Homo ...    37   0.008
gi|4505835 polycystin 2 [Homo sapiens]                                 36   0.025
gi|42544153 leukocyte receptor tyrosine kinase isoform 1 precurs...    35   0.032
gi|21735552 mitogen-activated protein kinase kinase kinase 12 [H...    35   0.055
gi|145309302 cell division cycle 2-like 5 isoform 1 [Homo sapiens]     35   0.055
gi|145309300 cell division cycle 2-like 5 isoform 2 [Homo sapiens]     35   0.055
gi|169213640 PREDICTED: hypothetical protein [Homo sapiens]            33   0.12 
gi|169204930 PREDICTED: hypothetical protein [Homo sapiens]            33   0.12 
gi|239755739 PREDICTED: hypothetical protein [Homo sapiens]            33   0.16 
gi|239750393 PREDICTED: hypothetical protein [Homo sapiens]            33   0.16 
gi|239744694 PREDICTED: hypothetical protein [Homo sapiens]            33   0.16 
gi|55743096 collagen, type XIV, alpha 1 [Homo sapiens]                 33   0.21 
gi|222831660 family with sequence similarity 171, member A2 [Hom...    32   0.27 
gi|169208912 PREDICTED: hypothetical protein [Homo sapiens]            32   0.27 
gi|169208667 PREDICTED: hypothetical protein [Homo sapiens]            32   0.27 
gi|239746532 PREDICTED: ankyrin repeat domain 60 [Homo sapiens]        32   0.27 
gi|29648305 zinc finger, CCHC domain containing 3 [Homo sapiens]       32   0.27 
gi|239750250 PREDICTED: hypothetical protein [Homo sapiens]            32   0.47 
gi|169208084 PREDICTED: hypothetical protein [Homo sapiens]            32   0.47 
gi|239754368 PREDICTED: hypothetical protein [Homo sapiens]            31   0.61 
gi|169163728 PREDICTED: hypothetical protein [Homo sapiens]            31   0.61 
gi|239749631 PREDICTED: hypothetical protein [Homo sapiens]            31   0.61 
gi|239748915 PREDICTED: hypothetical protein XP_002346855 [Homo ...    31   0.61 
gi|169163708 PREDICTED: hypothetical protein [Homo sapiens]            31   0.61 

>gi|169214978 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 199

 Score =  405 bits (1041), Expect = e-113
 Identities = 199/199 (100%), Positives = 199/199 (100%)

Query: 1   MGAPGTPRLSRFGGSRGALGGSVSLPGCTKCPLPRSLDGKRRGRRTSHASACDPCLKQSG 60
           MGAPGTPRLSRFGGSRGALGGSVSLPGCTKCPLPRSLDGKRRGRRTSHASACDPCLKQSG
Sbjct: 1   MGAPGTPRLSRFGGSRGALGGSVSLPGCTKCPLPRSLDGKRRGRRTSHASACDPCLKQSG 60

Query: 61  ERRSAKVSFRRVLTLAGPPASRARLFADPRRPVEPGKGGESDSLGVRLVTGAGVGWKLQR 120
           ERRSAKVSFRRVLTLAGPPASRARLFADPRRPVEPGKGGESDSLGVRLVTGAGVGWKLQR
Sbjct: 61  ERRSAKVSFRRVLTLAGPPASRARLFADPRRPVEPGKGGESDSLGVRLVTGAGVGWKLQR 120

Query: 121 RSARGSGAQELGVNLSSSGLASVGGSSRGCRAQRGFGGWRRAAVDPGPPPHDRAAASGSR 180
           RSARGSGAQELGVNLSSSGLASVGGSSRGCRAQRGFGGWRRAAVDPGPPPHDRAAASGSR
Sbjct: 121 RSARGSGAQELGVNLSSSGLASVGGSSRGCRAQRGFGGWRRAAVDPGPPPHDRAAASGSR 180

Query: 181 VRLMPCSGRLANGRALGSG 199
           VRLMPCSGRLANGRALGSG
Sbjct: 181 VRLMPCSGRLANGRALGSG 199


>gi|169214665 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 199

 Score =  405 bits (1041), Expect = e-113
 Identities = 199/199 (100%), Positives = 199/199 (100%)

Query: 1   MGAPGTPRLSRFGGSRGALGGSVSLPGCTKCPLPRSLDGKRRGRRTSHASACDPCLKQSG 60
           MGAPGTPRLSRFGGSRGALGGSVSLPGCTKCPLPRSLDGKRRGRRTSHASACDPCLKQSG
Sbjct: 1   MGAPGTPRLSRFGGSRGALGGSVSLPGCTKCPLPRSLDGKRRGRRTSHASACDPCLKQSG 60

Query: 61  ERRSAKVSFRRVLTLAGPPASRARLFADPRRPVEPGKGGESDSLGVRLVTGAGVGWKLQR 120
           ERRSAKVSFRRVLTLAGPPASRARLFADPRRPVEPGKGGESDSLGVRLVTGAGVGWKLQR
Sbjct: 61  ERRSAKVSFRRVLTLAGPPASRARLFADPRRPVEPGKGGESDSLGVRLVTGAGVGWKLQR 120

Query: 121 RSARGSGAQELGVNLSSSGLASVGGSSRGCRAQRGFGGWRRAAVDPGPPPHDRAAASGSR 180
           RSARGSGAQELGVNLSSSGLASVGGSSRGCRAQRGFGGWRRAAVDPGPPPHDRAAASGSR
Sbjct: 121 RSARGSGAQELGVNLSSSGLASVGGSSRGCRAQRGFGGWRRAAVDPGPPPHDRAAASGSR 180

Query: 181 VRLMPCSGRLANGRALGSG 199
           VRLMPCSGRLANGRALGSG
Sbjct: 181 VRLMPCSGRLANGRALGSG 199


>gi|169214758 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 199

 Score =  401 bits (1031), Expect = e-112
 Identities = 197/199 (98%), Positives = 198/199 (99%)

Query: 1   MGAPGTPRLSRFGGSRGALGGSVSLPGCTKCPLPRSLDGKRRGRRTSHASACDPCLKQSG 60
           MGAPGTPRLSRFGGSRGALGGSVSLPGCTKCPLPRSLDGKRRGRRTSHASACDPCLKQSG
Sbjct: 1   MGAPGTPRLSRFGGSRGALGGSVSLPGCTKCPLPRSLDGKRRGRRTSHASACDPCLKQSG 60

Query: 61  ERRSAKVSFRRVLTLAGPPASRARLFADPRRPVEPGKGGESDSLGVRLVTGAGVGWKLQR 120
           ERRSAKVSFRRVLTLAGPPASRARLFADPRRPVEPGKGGESDSLGVRLVTGAGVGW+LQR
Sbjct: 61  ERRSAKVSFRRVLTLAGPPASRARLFADPRRPVEPGKGGESDSLGVRLVTGAGVGWELQR 120

Query: 121 RSARGSGAQELGVNLSSSGLASVGGSSRGCRAQRGFGGWRRAAVDPGPPPHDRAAASGSR 180
           RSARGSGAQELGVNLS SGLASVGGSSRGCRAQRGFGGWRRAAVDPGPPPHDRAAASGSR
Sbjct: 121 RSARGSGAQELGVNLSFSGLASVGGSSRGCRAQRGFGGWRRAAVDPGPPPHDRAAASGSR 180

Query: 181 VRLMPCSGRLANGRALGSG 199
           VRLMPCSGRLANGRALGSG
Sbjct: 181 VRLMPCSGRLANGRALGSG 199


>gi|169207782 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 330

 Score = 39.3 bits (90), Expect = 0.002
 Identities = 51/183 (27%), Positives = 68/183 (37%), Gaps = 14/183 (7%)

Query: 2   GAPGTPRLSRFGGSRGALGGSVSLP----GCTKCPLPRSLDGKRRGRRTSHASACDPCLK 57
           G    P  SR GGSRG      +LP    G    P  R     R GR  +    C P  +
Sbjct: 83  GNSSDPATSRLGGSRGP---HPTLPPGPAGSLVFPERRGSLQDRLGR--ASRPGCPPSPR 137

Query: 58  QSGERRSAKVSFRRVLTLAGPPASRARLFADPRRPVEPGKGGESDSLGVRLVTGAGVGWK 117
            S + R A    R      G  A+  +   + R    PG  G            A    +
Sbjct: 138 GSRQERGANSPGRSGARGCGGAAALQQEPTNFRGRPRPGARGTDPPGRTLPAPLARPSTQ 197

Query: 118 LQRRSARGSGAQELGVNLSSSGLASVGGSSRGCRAQRGFGGWRRAAVD---PGPPPHDRA 174
             RR   G  A  LG     +G+   G +++G R +  +G W R  V    PG  PH+RA
Sbjct: 198 PGRRPGLGRAASPLGPR--GAGVTGAGPATQGGRDRGRWGRWVRRRVPCPLPGLRPHERA 255

Query: 175 AAS 177
            A+
Sbjct: 256 GAA 258


>gi|169207076 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 330

 Score = 39.3 bits (90), Expect = 0.002
 Identities = 51/183 (27%), Positives = 68/183 (37%), Gaps = 14/183 (7%)

Query: 2   GAPGTPRLSRFGGSRGALGGSVSLP----GCTKCPLPRSLDGKRRGRRTSHASACDPCLK 57
           G    P  SR GGSRG      +LP    G    P  R     R GR  +    C P  +
Sbjct: 83  GNSSDPATSRLGGSRGP---HPTLPPGPAGSLVFPERRGSLQDRLGR--ASRPGCPPSPR 137

Query: 58  QSGERRSAKVSFRRVLTLAGPPASRARLFADPRRPVEPGKGGESDSLGVRLVTGAGVGWK 117
            S + R A    R      G  A+  +   + R    PG  G            A    +
Sbjct: 138 GSRQERGANSPGRSGARGCGGAAALQQEPTNFRGRPRPGARGTDPPGRTLPAPLARPSTQ 197

Query: 118 LQRRSARGSGAQELGVNLSSSGLASVGGSSRGCRAQRGFGGWRRAAVD---PGPPPHDRA 174
             RR   G  A  LG     +G+   G +++G R +  +G W R  V    PG  PH+RA
Sbjct: 198 PGRRPGLGRAASPLGPR--GAGVTGAGPATQGGRDRGRWGRWVRRRVPCPLPGLRPHERA 255

Query: 175 AAS 177
            A+
Sbjct: 256 GAA 258


>gi|239748281 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 242

 Score = 37.4 bits (85), Expect = 0.008
 Identities = 55/195 (28%), Positives = 69/195 (35%), Gaps = 43/195 (22%)

Query: 2   GAPGTP-RLSRFGGSRGALGGSV-SLPGCTKCPLPRSL-----------DGKRRGRRTSH 48
           GAP TP   S   G  G   G V + P     PL R             + KRR RR   
Sbjct: 50  GAPSTPWDTSGAPGPAGISPGVVRTAPSLADHPLGRQARRAGRAGPEVEEVKRRARRLLQ 109

Query: 49  ASACDPCLKQSGERRSAKVSFRRVLTLAGPPASRARLFADPRRPVEPGKGGESDSLGVRL 108
             A DP             S  R+  + G P  R R     ++     +GG     G R 
Sbjct: 110 EPARDP-------------SILRLPRVVGVPGPRGRRHRGEQQQQREQRGG-----GAR- 150

Query: 109 VTGAGVGWKLQRRSARGSGAQELGVNLSSSGLASVGGSSRGCRAQRGFGGWRRAAVDPGP 168
             G G G + Q   A   G +++G      GL +    +RG           +A V P P
Sbjct: 151 APGPGPGSR-QPLPAGLHGRRKVGSAPDRHGLGAGSAGARG----------NKAVVGPSP 199

Query: 169 PPHDRAAASGSRVRL 183
           PP  R   SGS  RL
Sbjct: 200 PPPGRRLHSGSESRL 214


>gi|239742182 PREDICTED: hypothetical protein XP_002342446 [Homo
           sapiens]
          Length = 242

 Score = 37.4 bits (85), Expect = 0.008
 Identities = 55/195 (28%), Positives = 69/195 (35%), Gaps = 43/195 (22%)

Query: 2   GAPGTP-RLSRFGGSRGALGGSV-SLPGCTKCPLPRSL-----------DGKRRGRRTSH 48
           GAP TP   S   G  G   G V + P     PL R             + KRR RR   
Sbjct: 50  GAPSTPWDTSGAPGPAGISPGVVRTAPSLADHPLGRQARRAGRAGPEVEEVKRRARRLLQ 109

Query: 49  ASACDPCLKQSGERRSAKVSFRRVLTLAGPPASRARLFADPRRPVEPGKGGESDSLGVRL 108
             A DP             S  R+  + G P  R R     ++     +GG     G R 
Sbjct: 110 EPARDP-------------SILRLPRVVGVPGPRGRRHRGEQQQQREQRGG-----GAR- 150

Query: 109 VTGAGVGWKLQRRSARGSGAQELGVNLSSSGLASVGGSSRGCRAQRGFGGWRRAAVDPGP 168
             G G G + Q   A   G +++G      GL +    +RG           +A V P P
Sbjct: 151 APGPGPGSR-QPLPAGLHGRRKVGSAPDRHGLGAGSAGARG----------NKAVVGPSP 199

Query: 169 PPHDRAAASGSRVRL 183
           PP  R   SGS  RL
Sbjct: 200 PPPGRRLHSGSESRL 214


>gi|4505835 polycystin 2 [Homo sapiens]
          Length = 968

 Score = 35.8 bits (81), Expect = 0.025
 Identities = 51/183 (27%), Positives = 68/183 (37%), Gaps = 43/183 (23%)

Query: 32  PLPRSLDGKRRGRRTSHASACDPCLKQSG---ERRSAKVSFRRVLTLAG--PPASRARLF 86
           P PR+ D    GR  +  +A    L   G   E+R  ++  +R+   A   PPA  A   
Sbjct: 19  PAPRAPDP---GRLMAGCAAVGASLAAPGGLCEQRGLEIEMQRIRQAAARDPPAGAA--- 72

Query: 87  ADPRRPVE-----------PGKGGESDSLGVR-----LVTGAGVGWKL-QRRSARGSGAQ 129
           A P  P+            PG   E +   V      +V    V W+   RRSA      
Sbjct: 73  ASPSPPLSSCSRQAWSRDNPGFEAEEEEEEVEGEEGGMVVEMDVEWRPGSRRSA------ 126

Query: 130 ELGVNLSSSGLASVGGSSRGCRAQRGFG---GWRRAAVDPGPPPHDRAAASGSRVRLMPC 186
                 +SS ++SVG  SRG     G G   G RR   D GPP            R +P 
Sbjct: 127 ------ASSAVSSVGARSRGLGGYHGAGHPSGRRRRREDQGPPCPSPVGGGDPLHRHLPL 180

Query: 187 SGR 189
            G+
Sbjct: 181 EGQ 183


>gi|42544153 leukocyte receptor tyrosine kinase isoform 1 precursor
           [Homo sapiens]
          Length = 864

 Score = 35.4 bits (80), Expect = 0.032
 Identities = 28/97 (28%), Positives = 32/97 (32%), Gaps = 21/97 (21%)

Query: 79  PASRARLFADPR----RPVEPGKGGESDSLGVRLVTGAGVGW-----------KLQRRSA 123
           P  R R  A P     R   PG GG   +       G G GW            LQ  + 
Sbjct: 242 PRDRGRTQASPEKLENRSEAPGSGGRGGA------AGGGGGWTSRAPSPQAGRSLQEGAE 295

Query: 124 RGSGAQELGVNLSSSGLASVGGSSRGCRAQRGFGGWR 160
            G G  E    L  +     GG    C A  G GG+R
Sbjct: 296 GGQGCSEAWATLGWAAAGGFGGGGGACTAGGGGGGYR 332


>gi|21735552 mitogen-activated protein kinase kinase kinase 12 [Homo
           sapiens]
          Length = 859

 Score = 34.7 bits (78), Expect = 0.055
 Identities = 49/160 (30%), Positives = 55/160 (34%), Gaps = 45/160 (28%)

Query: 18  ALGGSVSLPGCTKCPLP--RSLDGKRRGRRTSHASACDPCLKQSGERRSAKVSFRRVLTL 75
           AL G V LPGC K P    RS  GK R R+ S   +C                       
Sbjct: 521 ALSG-VGLPGCPKAPPSPGRSRRGKTRHRKASAKGSCGDL-------------------- 559

Query: 76  AGPPASRARLFADPRRPVEPGKGGESDSLGVRLVTGAGVGWKLQRRSARGSGAQELGVNL 135
              P  R  +      P EPG  G    LG     G    W+    + RG     L   +
Sbjct: 560 ---PGLRTAV-----PPHEPGGPGSPGGLG-----GGPSAWEACPPALRGLHHDLLLRKM 606

Query: 136 SSSG--LASVGGSSRGCRAQRGFGGWRRAAVDPGPPPHDR 173
           SSS   L S    SRG  A  G G       DPG PP  R
Sbjct: 607 SSSSPDLLSAALGSRGRGATGGAG-------DPGSPPPAR 639


>gi|145309302 cell division cycle 2-like 5 isoform 1 [Homo sapiens]
          Length = 1512

 Score = 34.7 bits (78), Expect = 0.055
 Identities = 39/122 (31%), Positives = 54/122 (44%), Gaps = 12/122 (9%)

Query: 60  GERRSAKVSFRRVLTLAGPPASRARLFADPRRPVEPGKGGESDSLGVR-LVTGAGVGWKL 118
           G+RR+     RR    AG  A + R+F+ P +P + G GG S   GV  LV    V  + 
Sbjct: 95  GKRRAGGRQKRRRGPRAGQEAEKRRVFSLP-QPQQDGGGGASSGGGVTPLVEYEDVSSQS 153

Query: 119 QRRSARGSGAQELGVNLSSSGLASVGGS--SRGCRAQRGFGGWRRAAVDPGPPPHDRAAA 176
           ++    G GA       ++ G    GGS  S     +RG G  RR       P  DR ++
Sbjct: 154 EQGLLLG-GASAATAATAAGGTGGSGGSPASSSGTQRRGEGSERR-------PRRDRRSS 205

Query: 177 SG 178
           SG
Sbjct: 206 SG 207


>gi|145309300 cell division cycle 2-like 5 isoform 2 [Homo sapiens]
          Length = 1452

 Score = 34.7 bits (78), Expect = 0.055
 Identities = 39/122 (31%), Positives = 54/122 (44%), Gaps = 12/122 (9%)

Query: 60  GERRSAKVSFRRVLTLAGPPASRARLFADPRRPVEPGKGGESDSLGVR-LVTGAGVGWKL 118
           G+RR+     RR    AG  A + R+F+ P +P + G GG S   GV  LV    V  + 
Sbjct: 95  GKRRAGGRQKRRRGPRAGQEAEKRRVFSLP-QPQQDGGGGASSGGGVTPLVEYEDVSSQS 153

Query: 119 QRRSARGSGAQELGVNLSSSGLASVGGS--SRGCRAQRGFGGWRRAAVDPGPPPHDRAAA 176
           ++    G GA       ++ G    GGS  S     +RG G  RR       P  DR ++
Sbjct: 154 EQGLLLG-GASAATAATAAGGTGGSGGSPASSSGTQRRGEGSERR-------PRRDRRSS 205

Query: 177 SG 178
           SG
Sbjct: 206 SG 207


>gi|169213640 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 160

 Score = 33.5 bits (75), Expect = 0.12
 Identities = 34/98 (34%), Positives = 40/98 (40%), Gaps = 15/98 (15%)

Query: 117 KLQRRSARGSGAQE---LGVNLSSSGLASVGGSSRGCRA--QRGFGGWRRAAVDPG---- 167
           K QRR  R    QE   L  +L    L S  GS    RA  ++G   W R+  +PG    
Sbjct: 29  KSQRRQCRRKTGQESRLLPADLCQDLLCSDCGSGCSLRAHPRQGTLAWPRSPPEPGKLGS 88

Query: 168 ----PPPHDRA--AASGSRVRLMPCSGRLANGRALGSG 199
               P P + A  A  G  V   PCS R  N  A G G
Sbjct: 89  PRAKPDPWEGASRAEPGPGVAARPCSPRGGNWMAAGCG 126


>gi|169204930 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 373

 Score = 33.5 bits (75), Expect = 0.12
 Identities = 50/175 (28%), Positives = 58/175 (33%), Gaps = 39/175 (22%)

Query: 13  GGSRGALGGSVSLPGCTKCPLPRSLDGKRRGRRTSHASACDPCLKQSGERRSAKVSFRRV 72
           G  RGA    VS     + PL   L G    R TS                        V
Sbjct: 58  GNLRGAPTAPVSFSRIRRNPLRTQLSGSPPRRPTS------------------------V 93

Query: 73  LTLAGPPASRARLFADPRRP-VEPGKGGESDSLGVRLVTGAGVGWKLQ--RRSARGSGAQ 129
           L LA P          PRRP    G G  S    V  +   G   +L+  R + RGSG +
Sbjct: 94  LRLASPAGDL------PRRPRPRAGGGRHSPRPAVGTIFRGGRKGRLREGRGAVRGSGKR 147

Query: 130 E---LGVNLSSSGLASVGGSSRGCRAQRGFGGW---RRAAVDPGPPPHDRAAASG 178
               L      S LA +G    G  A RG+GG    R     PG P H      G
Sbjct: 148 RGWGLRPQRVRSRLAGLGAPRGGAAAPRGWGGQGAERLGVHQPGLPTHAALRGGG 202


>gi|239755739 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 202

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 36/115 (31%), Positives = 47/115 (40%), Gaps = 11/115 (9%)

Query: 74  TLAGPPASRARLFADPRRPVEPGKGGESDSLGVRLVTGAGVGWK---------LQRRSAR 124
           TL+G P S + L  +    V+PG GGE      R    AG G +          Q R+ R
Sbjct: 3   TLSGRPFSSSSLSRETIG-VQPGWGGEEVQGLARAGLAAGKGQRPPGPGRVRAAQARARR 61

Query: 125 GSGAQELGVNLSSSGLASVGGSSRGCRAQRGFGGWRRAAVDPGPPPHDRAAASGS 179
           G GA+E     +    A+ GG+  G  AQ       RA     P     AA +GS
Sbjct: 62  GGGARERPAEGARGPRAARGGARAGPDAQLRAARTHRARAQT-PQLRREAACAGS 115


>gi|239750393 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 373

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 50/175 (28%), Positives = 58/175 (33%), Gaps = 39/175 (22%)

Query: 13  GGSRGALGGSVSLPGCTKCPLPRSLDGKRRGRRTSHASACDPCLKQSGERRSAKVSFRRV 72
           G  RGA    VS     + PL   L G    R TS                        V
Sbjct: 58  GNLRGAPTAPVSFSRIRRNPLRTQLSGSPPRRPTS------------------------V 93

Query: 73  LTLAGPPASRARLFADPRRP-VEPGKGGESDSLGVRLVTGAGVGWKLQ--RRSARGSGAQ 129
           L LA P          PRRP    G G  S    V  +   G   +L+  R + RGSG +
Sbjct: 94  LRLASPAGDL------PRRPRPRAGGGRHSPRPAVGTIFRGGRKGRLREGRGALRGSGKR 147

Query: 130 E---LGVNLSSSGLASVGGSSRGCRAQRGFGGW---RRAAVDPGPPPHDRAAASG 178
               L      S LA +G    G  A RG+GG    R     PG P H      G
Sbjct: 148 RGWGLRPQRVRSRLAGLGAPRGGAAAPRGWGGQGAERLGVHQPGLPTHAALRGGG 202


>gi|239744694 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 373

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 50/175 (28%), Positives = 58/175 (33%), Gaps = 39/175 (22%)

Query: 13  GGSRGALGGSVSLPGCTKCPLPRSLDGKRRGRRTSHASACDPCLKQSGERRSAKVSFRRV 72
           G  RGA    VS     + PL   L G    R TS                        V
Sbjct: 58  GNLRGAPTAPVSFSRIRRNPLRTQLSGSPPRRPTS------------------------V 93

Query: 73  LTLAGPPASRARLFADPRRP-VEPGKGGESDSLGVRLVTGAGVGWKLQ--RRSARGSGAQ 129
           L LA P          PRRP    G G  S    V  +   G   +L+  R + RGSG +
Sbjct: 94  LRLASPAGDL------PRRPRPRAGGGRHSPRPAVGTIFRGGRKGRLREGRGALRGSGKR 147

Query: 130 E---LGVNLSSSGLASVGGSSRGCRAQRGFGGW---RRAAVDPGPPPHDRAAASG 178
               L      S LA +G    G  A RG+GG    R     PG P H      G
Sbjct: 148 RGWGLRPQRVRSRLAGLGAPRGGAAAPRGWGGQGAERLGVHQPGLPTHAALRGGG 202


>gi|55743096 collagen, type XIV, alpha 1 [Homo sapiens]
          Length = 1796

 Score = 32.7 bits (73), Expect = 0.21
 Identities = 45/178 (25%), Positives = 65/178 (36%), Gaps = 25/178 (14%)

Query: 1    MGAPGTPRLSRFGGSRGALGGSVSLPGCTKCPLPRSLDGKRRGR---RTSHASACDPCLK 57
            +G PGTP +    GS G   G++  PG       R   G  + +   R+     C+  ++
Sbjct: 1571 IGIPGTPGVPGITGSMGP-QGALGPPGVPGAKGERGERGDLQSQAMVRSVARQVCEQLIQ 1629

Query: 58   QSGERRSAKVS-----FRRVLTLAGPPASRARLFADPRRPVEPGKGGESDSLGVRLVTG- 111
                R +A ++        + T+ GPP        +P RP  PG  GE    G     G 
Sbjct: 1630 SHMARYTAILNQIPSHSSSIRTVQGPP-------GEPGRPGSPGAPGEQGPPGTPGFPGN 1682

Query: 112  AGVGWKLQRRSARGSGAQELGVNLSSSGLASVGGSSRGCRAQRGFGGWRRAAVDPGPP 169
            AGV      R   G   ++    + + G        RG     G  G  R    PGPP
Sbjct: 1683 AGVPGTPGERGLTGIKGEKGNPGVGTQG-------PRGPPGPAGPSGESRPG-SPGPP 1732


>gi|222831660 family with sequence similarity 171, member A2 [Homo
           sapiens]
          Length = 826

 Score = 32.3 bits (72), Expect = 0.27
 Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 13/97 (13%)

Query: 78  PPASRARLFADPRRPVEPGKGGESDSLGVRLVTGAGVGWKLQRRSARGSGAQELGVNLSS 137
           P  +RA    DP+RP  PG  G     G     G G GW    R+A  SG+  + V  + 
Sbjct: 570 PGPARAFPQPDPQRPQMPGHSGPGGEGG----GGGGEGWG-AGRAAPVSGSVTIPVLFNE 624

Query: 138 SGLASVGGSSRGCRAQRGFGGWRRAAVDPGPPPHDRA 174
           S +A + G  +    ++         ++ G  PH RA
Sbjct: 625 STMAQLNGELQALTEKK--------LLELGVKPHPRA 653


>gi|169208912 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 266

 Score = 32.3 bits (72), Expect = 0.27
 Identities = 39/113 (34%), Positives = 45/113 (39%), Gaps = 23/113 (20%)

Query: 73  LTLAGPPASRARLFADPRRPVEPGKGGESDSLGVRLVTGAGVGWKLQRRSARGSGAQELG 132
           L  AGPP  R  L    RRP+ PG   +S   G+R  T  G         AR  GA+ + 
Sbjct: 162 LPSAGPP--RPGLSVRRRRPLRPGAVRKSQPPGLRRQTAGG--------RARLGGARAVD 211

Query: 133 VNLSSSGLASVGGSSRGCRAQRGFGGWRRAAVDPG----PPPH-DRAAASGSR 180
                      G     C  +RG    RRAA  PG    P  H  RA AS SR
Sbjct: 212 --------PGTGWGHCACSRRRGERRSRRAAGVPGELGAPGGHCTRALASTSR 256


>gi|169208667 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 266

 Score = 32.3 bits (72), Expect = 0.27
 Identities = 39/113 (34%), Positives = 45/113 (39%), Gaps = 23/113 (20%)

Query: 73  LTLAGPPASRARLFADPRRPVEPGKGGESDSLGVRLVTGAGVGWKLQRRSARGSGAQELG 132
           L  AGPP  R  L    RRP+ PG   +S   G+R  T  G         AR  GA+ + 
Sbjct: 162 LPSAGPP--RPGLSVRRRRPLRPGAVRKSQPPGLRRQTAGG--------RARLGGARAVD 211

Query: 133 VNLSSSGLASVGGSSRGCRAQRGFGGWRRAAVDPG----PPPH-DRAAASGSR 180
                      G     C  +RG    RRAA  PG    P  H  RA AS SR
Sbjct: 212 --------PGTGWGHCACSRRRGERRSRRAAGVPGELGAPGGHCTRALASTSR 256


>gi|239746532 PREDICTED: ankyrin repeat domain 60 [Homo sapiens]
          Length = 345

 Score = 32.3 bits (72), Expect = 0.27
 Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 1/81 (1%)

Query: 113 GVGWKLQRRSARGSGAQELGVNLSSSGLASVGGSSRGCRA-QRGFGGWRRAAVDPGPPPH 171
           G  W ++R +A   GA+  G    +S L    G   G RA  +G GG R  + D    P 
Sbjct: 4   GRAWGMRRAAAGAGGARAAGPTGGASRLHPNAGRRSGARAGAQGCGGPRVGSADSRALPA 63

Query: 172 DRAAASGSRVRLMPCSGRLAN 192
              A +  R + + C  + A+
Sbjct: 64  QPLACARGRSQRLVCDPKAAS 84


>gi|29648305 zinc finger, CCHC domain containing 3 [Homo sapiens]
          Length = 403

 Score = 32.3 bits (72), Expect = 0.27
 Identities = 29/95 (30%), Positives = 39/95 (41%), Gaps = 9/95 (9%)

Query: 13  GGSRGALGGSVSLPGCTKCPLPRSLDGKRRGRRTSHA-SACDPCLK----QSGERRSAKV 67
           GG    LGG   L        P +  G  +GRR   A  A DP  K    ++G R+ A+ 
Sbjct: 69  GGGSAGLGGPAGLAAPDLGDFPPAGRGDPKGRRRDPAGEAVDPRKKKGAAEAGRRKKAEA 128

Query: 68  SFRRVLTLAGP----PASRARLFADPRRPVEPGKG 98
           +   + T A P     A+   L  +P     PGKG
Sbjct: 129 AAAAMATPARPGEAEDAAERPLQDEPAAAAGPGKG 163


>gi|239750250 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 202

 Score = 31.6 bits (70), Expect = 0.47
 Identities = 35/115 (30%), Positives = 46/115 (40%), Gaps = 11/115 (9%)

Query: 74  TLAGPPASRARLFADPRRPVEPGKGGESDSLGVRLVTGAGVGWK---------LQRRSAR 124
           TL+G P S + L  +    V+PG GGE      R     G G +          Q R+ R
Sbjct: 3   TLSGRPFSSSSLSRETIG-VQPGWGGEEVQGLARAGLATGKGQRPPGPGRVRAAQARARR 61

Query: 125 GSGAQELGVNLSSSGLASVGGSSRGCRAQRGFGGWRRAAVDPGPPPHDRAAASGS 179
           G GA+E     +    A+ GG+  G  AQ       RA     P     AA +GS
Sbjct: 62  GGGARERPAEGARGPRAARGGARAGPDAQLRAARTHRARAQT-PQLRREAACAGS 115


>gi|169208084 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 266

 Score = 31.6 bits (70), Expect = 0.47
 Identities = 39/113 (34%), Positives = 45/113 (39%), Gaps = 23/113 (20%)

Query: 73  LTLAGPPASRARLFADPRRPVEPGKGGESDSLGVRLVTGAGVGWKLQRRSARGSGAQELG 132
           L  AGPP  R  L    RRP+ PG   +S   G+R  T  G         AR  GA+ + 
Sbjct: 162 LPSAGPP--RPGLSVRWRRPLRPGAVRKSQPPGLRRQTAGG--------RARLGGARAVD 211

Query: 133 VNLSSSGLASVGGSSRGCRAQRGFGGWRRAAVDPG----PPPH-DRAAASGSR 180
                      G     C  +RG    RRAA  PG    P  H  RA AS SR
Sbjct: 212 --------PGTGWGHCACSRRRGERRSRRAAGVPGELGAPGGHCTRALASTSR 256


>gi|239754368 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 336

 Score = 31.2 bits (69), Expect = 0.61
 Identities = 23/53 (43%), Positives = 25/53 (47%), Gaps = 4/53 (7%)

Query: 151 RAQRGFGGWRRAAVDPG----PPPHDRAAASGSRVRLMPCSGRLANGRALGSG 199
           R Q GFG   RAA   G    PP   R   SG R R  P    L +GR+ GSG
Sbjct: 191 RVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPGPGPPALRSGRSRGSG 243


>gi|169163728 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 237

 Score = 31.2 bits (69), Expect = 0.61
 Identities = 38/108 (35%), Positives = 43/108 (39%), Gaps = 28/108 (25%)

Query: 59  SGERRSAKVSFRRVLTLAGPPASRARLFADPRRP--------VEPGKGGESDSLGVRLVT 110
           SGE RS     RR      PPA R    A  RR         +   KGG S   G R   
Sbjct: 104 SGEERSQPRRPRRP-----PPAPRRPRPAPGRRKSLYEAAPLLTREKGGRSGRRGDR--- 155

Query: 111 GAGVGWKLQRRSARGSGAQELGVNLSSSGLASVGGSSRGCRAQRGFGG 158
             G GW      + G  A+  G   SS+GL +  GSSRG     GF G
Sbjct: 156 -GGSGW------SHGHTARVGGTGDSSAGLTTFPGSSRG-----GFSG 191


>gi|239749631 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 217

 Score = 31.2 bits (69), Expect = 0.61
 Identities = 53/198 (26%), Positives = 69/198 (34%), Gaps = 46/198 (23%)

Query: 37  LDGKRRGRRTSHASACDPCLKQSGERRSAKVSFRRVLTLAGPPASRARLFADP------- 89
           L+  RRGRR        P L+  G R+    +      L G    RA   A+P       
Sbjct: 12  LNFPRRGRRGERR----PGLRSEGRRKGLLAAEAGGAVLGG--GRRAGRRAEPPEPSYSR 65

Query: 90  -RRPVEPGKGGESDSLGVRLVTGAGVGWKLQRRSARGSGAQELG-----------VNLSS 137
            RR    GKGG S +LG      A     L+  + RGS +  LG           ++   
Sbjct: 66  ERRETMEGKGGWSAALGSLPPPPAAACTALKPATRRGSCSAPLGPARRCSARRPRLHQGG 125

Query: 138 SGLASVGGSSRGCRAQRGFGGW------RRAAVD----------PGPPPHDRAAASGSRV 181
           +G  + GG+  G R     G         R A D          P PP     A +  R+
Sbjct: 126 AGRLAAGGAEAGERRSPNRGATSSLSPIARGAADVRPFSWVGGLPRPP-----APAALRL 180

Query: 182 RLMPCSGRLANGRALGSG 199
            L P   R A   A G G
Sbjct: 181 LLPPAPRRRARSWACGPG 198


>gi|239748915 PREDICTED: hypothetical protein XP_002346855 [Homo
           sapiens]
          Length = 336

 Score = 31.2 bits (69), Expect = 0.61
 Identities = 23/53 (43%), Positives = 25/53 (47%), Gaps = 4/53 (7%)

Query: 151 RAQRGFGGWRRAAVDPG----PPPHDRAAASGSRVRLMPCSGRLANGRALGSG 199
           R Q GFG   RAA   G    PP   R   SG R R  P    L +GR+ GSG
Sbjct: 191 RVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPGPGPPALRSGRSRGSG 243


>gi|169163708 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 237

 Score = 31.2 bits (69), Expect = 0.61
 Identities = 38/108 (35%), Positives = 43/108 (39%), Gaps = 28/108 (25%)

Query: 59  SGERRSAKVSFRRVLTLAGPPASRARLFADPRRP--------VEPGKGGESDSLGVRLVT 110
           SGE RS     RR      PPA R    A  RR         +   KGG S   G R   
Sbjct: 104 SGEERSQPRRPRRP-----PPAPRRPRPAPGRRKSLYEAAPLLTREKGGRSGRRGDR--- 155

Query: 111 GAGVGWKLQRRSARGSGAQELGVNLSSSGLASVGGSSRGCRAQRGFGG 158
             G GW      + G  A+  G   SS+GL +  GSSRG     GF G
Sbjct: 156 -GGSGW------SHGHTARVGGTGDSSAGLTTFPGSSRG-----GFSG 191


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.135    0.419 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,497,123
Number of Sequences: 37866
Number of extensions: 490041
Number of successful extensions: 2376
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 126
Number of HSP's that attempted gapping in prelim test: 2220
Number of HSP's gapped (non-prelim): 299
length of query: 199
length of database: 18,247,518
effective HSP length: 97
effective length of query: 102
effective length of database: 14,574,516
effective search space: 1486600632
effective search space used: 1486600632
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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