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Search of human proteins with 11128043
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|11128043 protocadherin gamma subfamily A, 9 isoform 1
precursor [Homo sapiens]
(932 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precurs... 1843 0.0
gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precurs... 1589 0.0
gi|14270484 protocadherin gamma subfamily A, 8 isoform 1 precurs... 1477 0.0
gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precur... 1450 0.0
gi|8850232 protocadherin gamma subfamily A, 12 isoform 1 precurs... 1349 0.0
gi|11056026 protocadherin gamma subfamily A, 4 isoform 1 precurs... 1349 0.0
gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precurs... 1343 0.0
gi|11056024 protocadherin gamma subfamily A, 5 isoform 1 precurs... 1342 0.0
gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precurs... 1333 0.0
gi|14589880 protocadherin gamma subfamily A, 3 isoform 1 precurs... 1333 0.0
gi|11128039 protocadherin gamma subfamily A, 11 isoform 1 precur... 1325 0.0
gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precurs... 1305 0.0
gi|11056030 protocadherin gamma subfamily A, 2 isoform 1 precurs... 1300 0.0
gi|7662056 protocadherin gamma subfamily A, 8 isoform 2 precurso... 1230 0.0
gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precur... 1196 0.0
gi|14196468 protocadherin gamma subfamily A, 4 isoform 2 precurs... 1100 0.0
gi|14196457 protocadherin gamma subfamily A, 12 isoform 2 precur... 1095 0.0
gi|14196471 protocadherin gamma subfamily A, 5 isoform 2 precurs... 1093 0.0
gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precurs... 1091 0.0
gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precurs... 1085 0.0
gi|14196465 protocadherin gamma subfamily A, 3 isoform 2 precurs... 1081 0.0
gi|14196451 protocadherin gamma subfamily A, 11 isoform 2 precur... 1078 0.0
gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precurs... 1056 0.0
gi|14196462 protocadherin gamma subfamily A, 2 isoform 2 precurs... 1053 0.0
gi|11128035 protocadherin gamma subfamily B, 2 isoform 1 precurs... 926 0.0
gi|11128031 protocadherin gamma subfamily B, 5 isoform 1 precurs... 922 0.0
gi|11128027 protocadherin gamma subfamily B, 7 isoform 1 precurs... 920 0.0
gi|13470082 protocadherin gamma subfamily B, 4 isoform 1 precurs... 911 0.0
gi|11128037 protocadherin gamma subfamily B, 1 isoform 1 precurs... 908 0.0
gi|11128033 protocadherin gamma subfamily B, 3 isoform 1 precurs... 906 0.0
>gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1843 bits (4775), Expect = 0.0
Identities = 932/932 (100%), Positives = 932/932 (100%)
Query: 1 MAAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELA 60
MAAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELA
Sbjct: 1 MAAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELA 60
Query: 61 ERRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIE 120
ERRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIE
Sbjct: 61 ERRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIE 120
Query: 121 IEVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSL 180
IEVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSL
Sbjct: 121 IEVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSL 180
Query: 181 NVQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAP 240
NVQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAP
Sbjct: 181 NVQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAP 240
Query: 241 VFAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGE 300
VFAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGE
Sbjct: 241 VFAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGE 300
Query: 301 ISTAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDA 360
ISTAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDA
Sbjct: 301 ISTAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDA 360
Query: 361 PQGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNI 420
PQGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNI
Sbjct: 361 PQGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNI 420
Query: 421 TVTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPD 480
TVTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPD
Sbjct: 421 TVTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPD 480
Query: 481 SNENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSP 540
SNENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSP
Sbjct: 481 SNENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSP 540
Query: 541 PLSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
PLSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
Query: 661 TVAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWH 720
TVAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWH
Sbjct: 661 TVAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWH 720
Query: 721 SSHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLI 780
SSHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLI
Sbjct: 721 SSHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLI 780
Query: 781 SQQSCEKNEPLCVSVDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 840
SQQSCEKNEPLCVSVDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN
Sbjct: 781 SQQSCEKNEPLCVSVDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 840
Query: 841 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900
NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS
Sbjct: 841 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900
Query: 901 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 901 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
>gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precursor
[Homo sapiens]
Length = 828
Score = 1589 bits (4115), Expect = 0.0
Identities = 808/808 (100%), Positives = 808/808 (100%)
Query: 1 MAAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELA 60
MAAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELA
Sbjct: 1 MAAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELA 60
Query: 61 ERRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIE 120
ERRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIE
Sbjct: 61 ERRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIE 120
Query: 121 IEVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSL 180
IEVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSL
Sbjct: 121 IEVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSL 180
Query: 181 NVQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAP 240
NVQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAP
Sbjct: 181 NVQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAP 240
Query: 241 VFAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGE 300
VFAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGE
Sbjct: 241 VFAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGE 300
Query: 301 ISTAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDA 360
ISTAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDA
Sbjct: 301 ISTAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDA 360
Query: 361 PQGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNI 420
PQGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNI
Sbjct: 361 PQGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNI 420
Query: 421 TVTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPD 480
TVTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPD
Sbjct: 421 TVTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPD 480
Query: 481 SNENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSP 540
SNENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSP
Sbjct: 481 SNENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSP 540
Query: 541 PLSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
PLSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
Query: 661 TVAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWH 720
TVAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWH
Sbjct: 661 TVAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWH 720
Query: 721 SSHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLI 780
SSHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLI
Sbjct: 721 SSHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLI 780
Query: 781 SQQSCEKNEPLCVSVDSKFPIEDTPLVP 808
SQQSCEKNEPLCVSVDSKFPIEDTPLVP
Sbjct: 781 SQQSCEKNEPLCVSVDSKFPIEDTPLVP 808
>gi|14270484 protocadherin gamma subfamily A, 8 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1477 bits (3824), Expect = 0.0
Identities = 751/932 (80%), Positives = 807/932 (86%)
Query: 1 MAAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELA 60
MAAP RG L+LLC+LLG LWE QIRYSVPEET+KG VGNISKDL L+PR+LA
Sbjct: 1 MAAPQSRPRRGELILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLA 60
Query: 61 ERRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIE 120
+ VRIVSRGRTQLF+LNPRSG+L+TAGRIDREELCAQSPRCL+N LVED+ KL+G+E
Sbjct: 61 KHGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVE 120
Query: 121 IEVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSL 180
IE+ DIND+ PKFQ E LEVKINEIAVPGARYPLPEA+DPDVGVNSLQSYQLSPNHHFSL
Sbjct: 121 IEIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSL 180
Query: 181 NVQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAP 240
+VQTGDNGAINPELVLERALDREE AHHLVLTASDGG+P RSSTVRIHVTVLDTNDNAP
Sbjct: 181 DVQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAP 240
Query: 241 VFAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGE 300
VF IYRVKVLEN+PPGT LLT TASD DEGINGKVAYKF KINEKQ+ LFQLNENTGE
Sbjct: 241 VFPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGE 300
Query: 301 ISTAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDA 360
IS AKSLDYEECSFYEMEIQAED G L G TK+LISVEDVNDNRPEV ITSLFSPV E++
Sbjct: 301 ISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENS 360
Query: 361 PQGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNI 420
GTVI + HD+DSGKNGQVVC ++NL F LE S +YYRL+T + LDRE S YNI
Sbjct: 361 LPGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNI 420
Query: 421 TVTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPD 480
TV A+D GTPPLSTE I L V DINDNPP F ASYS Y+ ENN RG SIFS+ A+DPD
Sbjct: 421 TVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPD 480
Query: 481 SNENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSP 540
S EN++V YS+ EDT+QG+PLS+Y+SINSDTGVLYAL SFDYEQ RDLQ+ VTASDSG P
Sbjct: 481 SQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDP 540
Query: 541 PLSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
PLSSN+SL LFVLDQNDNAPEILYPALPTDGSTGVELAPRSAE GYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSYRL KASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
Query: 661 TVAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWH 720
TVA+ADSIP++L +LGSL+ D S LTLYLVVAVA +SCVFL FV LL LRLR WH
Sbjct: 661 TVAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWH 720
Query: 721 SSHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLI 780
S LL+ + L GVP SHFVGV+ V+AFLQTYSQE SLTADSRKSHLIFPQPNYAD LI
Sbjct: 721 KSRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLI 780
Query: 781 SQQSCEKNEPLCVSVDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 840
SQ+ CEKN+ L SVD + QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN
Sbjct: 781 SQEGCEKNDSLLTSVDFHEYKNEADHGQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 840
Query: 841 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900
NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS
Sbjct: 841 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900
Query: 901 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 901 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
>gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precursor
[Homo sapiens]
Length = 936
Score = 1450 bits (3753), Expect = 0.0
Identities = 737/920 (80%), Positives = 790/920 (85%)
Query: 13 LVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVSRGRT 72
LVLLC G+ WEA A QI YS+PEE EKG VGNISKDL L PRELAER VRIVSRGRT
Sbjct: 17 LVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSRGRT 76
Query: 73 QLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDINDSAPK 132
QLFSLNPRSG+L+TAGRIDREELCAQS RC+V+F +LVEDRVKL+GIEIEVTDIND+APK
Sbjct: 77 QLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDNAPK 136
Query: 133 FQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNGAINP 192
FQAE+L+VKINE G R+PLPEAIDPDVGVNSLQSYQLSPN HFSL VQ+ NG P
Sbjct: 137 FQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGVKYP 196
Query: 193 ELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKVL 252
ELVLE +LDREE HHLVLTASDGG+P RS TV + VTV D NDNAPVF YRV V
Sbjct: 197 ELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRVSVP 256
Query: 253 ENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEEC 312
EN+P GT LLT TA+D DEG NG+V Y F K+ + Q L FQLN+ TGEI +++LDYEE
Sbjct: 257 ENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDYEET 316
Query: 313 SFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNAH 372
FYE+EIQAEDGG KVLI+VEDVNDN PE+TITSLFSPV ED+P GTV+ L N H
Sbjct: 317 GFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALLNVH 376
Query: 373 DRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPPL 432
D DS +NGQV CSI L F LE S + YYRL+ + LDRE+ S YNITVTATD G+PPL
Sbjct: 377 DLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGSPPL 436
Query: 433 STEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSLA 492
STE H LQV DINDNPP FSQ SY Y+PENNARG SIFSV A DPDS EN+++IYSLA
Sbjct: 437 STEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIYSLA 496
Query: 493 EDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLFV 552
EDTIQG PLS+Y+SINSDTGVLYAL SFDYEQF +LQMQVTASDSG PPLSSNVSL LFV
Sbjct: 497 EDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLSLFV 556
Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKAS 612
LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRL KAS
Sbjct: 557 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 616
Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDIL 672
EPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVA+ADSIP +L
Sbjct: 617 EPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVL 676
Query: 673 ADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATSDGL 732
ADLGS + PA+ E SDLTLYLVVAVA VSCVFL FVI LLA RLR WH S LL+A+ GL
Sbjct: 677 ADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGL 736
Query: 733 AGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLISQQSCEKNEPLC 792
GV SHFVGVDGVRAFLQTYS E SLTADSRKSHLIFPQPNYADTLISQ+SCEKN+PL
Sbjct: 737 TGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKNDPLS 796
Query: 793 VSVDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI 852
+ DSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI
Sbjct: 797 LLDDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI 856
Query: 853 LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD 912
LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD
Sbjct: 857 LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD 916
Query: 913 GKAPAGGNGNKKKSGKKEKK 932
GKAPAGGNGNKKKSGKKEKK
Sbjct: 917 GKAPAGGNGNKKKSGKKEKK 936
>gi|8850232 protocadherin gamma subfamily A, 12 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1349 bits (3491), Expect = 0.0
Identities = 685/920 (74%), Positives = 767/920 (83%)
Query: 13 LVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVSRGRT 72
LVLL LLG LWE +QIRYSVPEE EKG VG+IS+DL LEPRELAER VRI+ RGRT
Sbjct: 13 LVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRT 72
Query: 73 QLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDINDSAPK 132
QLF+LNPRSG+LVTAGRIDREELC + +C +N +L+ED+VK+YG+E+EV DIND+AP
Sbjct: 73 QLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPY 132
Query: 133 FQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNGAINP 192
F+ LE+KI+E A R+PLP A DPD+G NSLQSY+LSPN HFSL VQ G +G+ P
Sbjct: 133 FRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYP 192
Query: 193 ELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKVL 252
ELVL+RALDREE AHHLVLTASDGG+P R+ T RI V VLD NDNAP FAQ YR V
Sbjct: 193 ELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVP 252
Query: 253 ENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEEC 312
EN+ GT LL A+D DEG+N +V Y F +++K + +F+L+ N+G IST LD+EE
Sbjct: 253 ENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHEES 312
Query: 313 SFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNAH 372
FY+ME+QA D G KVLI+V DVNDN PEV +TSL S V E++P+GT+I L N +
Sbjct: 313 GFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNVN 372
Query: 373 DRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPPL 432
D+DS +NGQV+C IQ NL F LE S +YY L+T +LDRE+ YNITVTATDRGTPPL
Sbjct: 373 DQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPPL 432
Query: 433 STEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSLA 492
STE HI+L V D NDNPP F QASYS Y+PENN RG S+ SV A+DPD EN+++ YSLA
Sbjct: 433 STETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLA 492
Query: 493 EDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLFV 552
E+TIQG+ LS+YVSINSDTGVLYAL SFDYEQFRDLQ++V A D+G PPLSSNVSL LFV
Sbjct: 493 ENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFV 552
Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKAS 612
LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRL KAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDIL 672
EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVA+ADSIP +L
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVL 672
Query: 673 ADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATSDGL 732
ADLGSL+ PA+ E SDLTLYLVVAVA VSCVFL FVI LLALRLR WH S LL+A+ GL
Sbjct: 673 ADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQASGGGL 732
Query: 733 AGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLISQQSCEKNEPLC 792
G P SHFVGVDGV+AFLQTYS E SLT DSRKSHLIFPQPNYAD L+SQ+S EK+EPL
Sbjct: 733 TGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEKSEPLL 792
Query: 793 VSVDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI 852
+S DS F + L+ QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI
Sbjct: 793 LSGDSVFSKDSHGLIEQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI 852
Query: 853 LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD 912
LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD
Sbjct: 853 LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD 912
Query: 913 GKAPAGGNGNKKKSGKKEKK 932
GKAPAGGNGNKKKSGKKEKK
Sbjct: 913 GKAPAGGNGNKKKSGKKEKK 932
>gi|11056026 protocadherin gamma subfamily A, 4 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 1349 bits (3491), Expect = 0.0
Identities = 685/932 (73%), Positives = 768/932 (82%), Gaps = 1/932 (0%)
Query: 1 MAAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELA 60
MAAP RL+ +C LLG+L E RA QI YSV EE E+G +VGNI+KDL L PRELA
Sbjct: 1 MAAPPARPDHTRLLQICLLLGVLVEIRAEQILYSVFEEQEEGSVVGNIAKDLGLAPRELA 60
Query: 61 ERRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIE 120
ER VRIVSRGRTQLF+LNPRSGTLVTAGRIDREELC +SP C+ N ++L+ED VK+ +E
Sbjct: 61 ERGVRIVSRGRTQLFALNPRSGTLVTAGRIDREELCDRSPNCVTNLEILLEDTVKILRVE 120
Query: 121 IEVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSL 180
+E+ D+ND+ P F E E+K+ E PGAR+PLPEA DPDVGVNSLQ YQL+ N +FSL
Sbjct: 121 VEIIDVNDNPPSFGTEQREIKVAENENPGARFPLPEAFDPDVGVNSLQGYQLNSNGYFSL 180
Query: 181 NVQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAP 240
+VQ+G +G PELVLERALDREE HHLVLTA DGG+P RS T RI + ++DTNDNAP
Sbjct: 181 DVQSGADGIKYPELVLERALDREEEAVHHLVLTAFDGGDPVRSGTARILIILVDTNDNAP 240
Query: 241 VFAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGE 300
VF Q Y V V ENVP GT LLT A+D DEG NG V Y F K+ +K S LFQLN +G+
Sbjct: 241 VFTQPEYHVSVRENVPVGTRLLTVKATDPDEGANGDVTYSFRKVRDKISQLFQLNSLSGD 300
Query: 301 ISTAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDA 360
I+ LDYE+ FY+++++A DG GL+ +KVL++V D NDN PEVT+TSL S V+E +
Sbjct: 301 ITILGGLDYEDSGFYDIDVEAHDGPGLRARSKVLVTVLDENDNAPEVTVTSLTSSVQESS 360
Query: 361 PQGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNI 420
GTVI LFN HD DSG NG V CSI +NL FTLE + +YYRLLT + LDRE+ SEYNI
Sbjct: 361 SPGTVIALFNVHDSDSGGNGLVTCSIPDNLPFTLEKTYGNYYRLLTHRTLDREEVSEYNI 420
Query: 421 TVTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPD 480
TVTATD+GTPPLSTE HI+LQV DINDNPP F ASYS Y+PENN RG SI S+ A DPD
Sbjct: 421 TVTATDQGTPPLSTETHISLQVMDINDNPPTFPHASYSAYIPENNPRGASILSMTAQDPD 480
Query: 481 SNENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSP 540
S +N+R+ YSLAEDT QG+PLS+YVSINS+TG+LYALCSFDYEQFRDLQ+ +TASDSG P
Sbjct: 481 SGDNARITYSLAEDTFQGAPLSSYVSINSNTGILYALCSFDYEQFRDLQLLMTASDSGDP 540
Query: 541 PLSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
PLSSNVSL LFVLDQNDN PEILYP PTDGSTGVELAPRSA+ GYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNVPEILYPTFPTDGSTGVELAPRSADSGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSY L K+SEPGLF+VGLHTGEVRTARALLDRDALKQ LVV VQDHGQPPLSATVTL
Sbjct: 601 NAWLSYSLLKSSEPGLFAVGLHTGEVRTARALLDRDALKQRLVVVVQDHGQPPLSATVTL 660
Query: 661 TVAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWH 720
TVA+ADSIPD+LADLGSL+ AD + S LTLYLVVAVA VSCVFL FV LLAL+LR WH
Sbjct: 661 TVAVADSIPDVLADLGSLKPSADPDDSGLTLYLVVAVAAVSCVFLAFVTVLLALKLRRWH 720
Query: 721 SSHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLI 780
S LL A LAGVP SHFVGVDGVRAFLQTYS E SLTADSRKSHLIF QP+YADTLI
Sbjct: 721 KSRLLHAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFSQPSYADTLI 780
Query: 781 SQQSCEKNEPLCVSVDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 840
S++SCEK+EPL ++ D + P + QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN
Sbjct: 781 SRESCEKSEPLLITQD-LLETKGDPNLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 839
Query: 841 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900
NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS
Sbjct: 840 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 899
Query: 901 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 900 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 931
>gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1343 bits (3475), Expect = 0.0
Identities = 690/931 (74%), Positives = 765/931 (82%), Gaps = 1/931 (0%)
Query: 2 AAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAE 61
A P RG LL LLG WEA A +I YSV EET+KG VG+I+KDL LEPRELAE
Sbjct: 3 AQPRGGDYRG-FFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAE 61
Query: 62 RRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEI 121
R VRI+SRGRTQLF+LN RSG+LVTAGRIDREE+CAQS RCLVNF +L+ED++ LY I++
Sbjct: 62 RGVRIISRGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDV 121
Query: 122 EVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLN 181
E+ DIND+ P+F E + VKI E PG R+PL EA DPDVG NSLQSYQLSPN HFSL
Sbjct: 122 EIIDINDNVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLA 181
Query: 182 VQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPV 241
VQ+GD+ PELVLER LDREE HHLVLTASDGG+P RSST I VTV+D ND+ PV
Sbjct: 182 VQSGDDETKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPV 241
Query: 242 FAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEI 301
F+ Y+V V ENVP GT LLT A DLDEG+NG+V Y F KI K +F LN TGEI
Sbjct: 242 FSLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEI 301
Query: 302 STAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAP 361
ST + LDYEE +FYEME+QA+DG G KVLI+V DVNDN PEVT+TSL S + ED P
Sbjct: 302 STLEGLDYEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTP 361
Query: 362 QGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNIT 421
GTVI LF DRDSGKNG+V C+I ENL F LE S ++YYRL+T + LDRE S YNIT
Sbjct: 362 LGTVIALFYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNIT 421
Query: 422 VTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDS 481
+ ATD GTPPLS E HI +QV D NDNPP F +SYSVY+ ENN RG SIF V A D DS
Sbjct: 422 LKATDGGTPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDS 481
Query: 482 NENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPP 541
+N+++ YSLAEDTIQG+P+S+YVSINSDTGVLYAL SFDYEQ R+LQ++VTA DSG PP
Sbjct: 482 EDNAQITYSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPP 541
Query: 542 LSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQN 601
LSSN+SL LFVLDQNDN PEILYPALPTDGSTG+ELAPRSAEPGYLVTKVVAVD+DSGQN
Sbjct: 542 LSSNMSLSLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQN 601
Query: 602 AWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLT 661
AWLSY L KASEPGLF+VGL+TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLT
Sbjct: 602 AWLSYLLLKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLT 661
Query: 662 VAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHS 721
VA+ADSIP++LADLGSL+ DLTLYLVVAVA VSCVFL FV+ LLALRLR WH
Sbjct: 662 VAVADSIPEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHK 721
Query: 722 SHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLIS 781
S LL+A+ GLA VPTSHFVG+DGV+AFLQTYS E SLTADSRKSHLIFPQPNY D LIS
Sbjct: 722 SRLLQASEGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLIS 781
Query: 782 QQSCEKNEPLCVSVDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNN 841
Q+SCEKN+ L SVD + E+ P + QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNN
Sbjct: 782 QESCEKNDSLLTSVDFQECKENLPSIQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNN 841
Query: 842 QFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSN 901
QFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSN
Sbjct: 842 QFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSN 901
Query: 902 ATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
ATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 902 ATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
>gi|11056024 protocadherin gamma subfamily A, 5 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 1342 bits (3473), Expect = 0.0
Identities = 688/932 (73%), Positives = 769/932 (82%), Gaps = 1/932 (0%)
Query: 1 MAAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELA 60
MA+P + G L+L LLG L E + QIRYS+PEE +KG VGNI+KDL LEP+ELA
Sbjct: 1 MASPPRGWGCGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELA 60
Query: 61 ERRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIE 120
ER VRIVSRGRTQLF+LNPRSG+LVTAGRIDREELCAQSP C+VNF +LVE+++K+YG+E
Sbjct: 61 ERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVE 120
Query: 121 IEVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSL 180
+E+ DIND+ P+F+ E L+VK+NE A G R LP A D DVGVNSL+SYQLS N HFSL
Sbjct: 121 VEIIDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSL 180
Query: 181 NVQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAP 240
+V +G +G PELVLE+ LDRE+ T H L+LTA DGG+P S T I VTVLD NDNAP
Sbjct: 181 DVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAP 240
Query: 241 VFAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGE 300
+F Y V V EN+P GT LL TA+D DEGINGK+ Y F EK S FQL+ N GE
Sbjct: 241 LFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGE 300
Query: 301 ISTAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDA 360
IST +SLDYEE FY ME+ A+DGG L KV+++V+DVNDN PEV +TSL S + ED
Sbjct: 301 ISTLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDC 360
Query: 361 PQGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNI 420
GTVI LF+ HD DSG+NG++ CSI NL F LE S ++YY LLT + LDRE+ S+YNI
Sbjct: 361 LPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNI 420
Query: 421 TVTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPD 480
T+T D GTPPLSTE HI L+V D+NDNPP F QASYS + ENN RG SIFSV A+DPD
Sbjct: 421 TLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPD 480
Query: 481 SNENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSP 540
S +N+RV YSLAEDT QG+PLS+YVSINSDTGVLYAL SFDYEQ RDLQ+ VTASDSG+P
Sbjct: 481 SGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNP 540
Query: 541 PLSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
PLSSNVSL LFVLDQNDN PEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQ 600
Query: 601 NAWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSYRL KASEPGLF+VGLHTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+
Sbjct: 601 NAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTV 660
Query: 661 TVAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWH 720
TVA+AD IPDILADLGS++ P D E DLTLYLVVAVA VSCVFL FVI LL LRLR WH
Sbjct: 661 TVAVADRIPDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWH 720
Query: 721 SSHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLI 780
S LL+A LAGVP SHFVGVDGVRAFLQTYS E SLTADSRKSHLIFPQPNYADTL+
Sbjct: 721 KSRLLQAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLL 780
Query: 781 SQQSCEKNEPLCVSVDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 840
S++SCEK+EPL +S D ++ V QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN
Sbjct: 781 SEESCEKSEPLLMS-DKVDANKEERRVQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 839
Query: 841 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900
NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS
Sbjct: 840 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 899
Query: 901 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 900 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 931
>gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1333 bits (3451), Expect = 0.0
Identities = 687/932 (73%), Positives = 766/932 (82%)
Query: 1 MAAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELA 60
MA P + R VLL +LLG LW A A+QIRYS+PEE EKG VGNI KDL LEP+ELA
Sbjct: 1 MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA 60
Query: 61 ERRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIE 120
E VRIVSRGR QLFSLNPR+G+LVTAGRIDREELCAQSPRCLV+F +LVED++ LY +E
Sbjct: 61 EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE 120
Query: 121 IEVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSL 180
+E+ DIND+ P+F E LEVKI E A P +R+PL E DPDVG+NSLQ ++LS N HFS+
Sbjct: 121 VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV 180
Query: 181 NVQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAP 240
+VQ+ +G PELVLE LDRE + LVLTA DGG+P RSS +I VTVLD NDN P
Sbjct: 181 DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP 240
Query: 241 VFAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGE 300
+F Q +YRV V EN+P GT +L TA+D DEG++G+V Y F KI EK S +F LN TGE
Sbjct: 241 MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE 300
Query: 301 ISTAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDA 360
IST+ +LDYE+ SFYE+ ++A DG GL+ KVLI++ DVNDN PEV +TS + E A
Sbjct: 301 ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA 360
Query: 361 PQGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNI 420
P GTVI LF DRDSG NG V CSI +L F LE S +YYRL+T LDRE+ YNI
Sbjct: 361 PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI 420
Query: 421 TVTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPD 480
TVTATD+GTPPLSTE I+L V D NDNPP F +SYSVY+ ENN RG SIFSV A DPD
Sbjct: 421 TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD 480
Query: 481 SNENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSP 540
++N++V YSLAEDT+QG+PLS+YVSINSDTG+LYAL SFDYEQ RDLQ+ VTASDSG P
Sbjct: 481 VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP 540
Query: 541 PLSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
PLSSNVSL LFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSYRL KASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
Query: 661 TVAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWH 720
TVA+AD IPDILADLGSL+ A SDLTLYLVVAVA VSCVFL FVI LLALRL+ WH
Sbjct: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWH 720
Query: 721 SSHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLI 780
S LL+A+ GLA +P SHFVGV+GVRAFLQTYS E SLTADSRKSHLIFPQPNYADTLI
Sbjct: 721 KSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
Query: 781 SQQSCEKNEPLCVSVDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 840
+Q+S EK+EPL ++ D + + QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN
Sbjct: 781 NQESYEKSEPLLITQDLLETKGEPRQLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 840
Query: 841 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900
NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS
Sbjct: 841 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900
Query: 901 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 901 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
>gi|14589880 protocadherin gamma subfamily A, 3 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1333 bits (3450), Expect = 0.0
Identities = 681/920 (74%), Positives = 758/920 (82%)
Query: 13 LVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVSRGRT 72
L LLC+LLG L E + QIRYSV EE +KG VGNI+ DL LEPRELAER VRIVSRGRT
Sbjct: 13 LALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGRT 72
Query: 73 QLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDINDSAPK 132
QLFSLNP+SG+LVTA RIDREELCAQ P CLV +LVED++K++ +EIE+ DIND+AP
Sbjct: 73 QLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAPN 132
Query: 133 FQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNGAINP 192
F E LE+KI E+ VPG R+P+ A DPDVG+NSLQ+Y+LSPN +FSL V + GA P
Sbjct: 133 FPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKYP 192
Query: 193 ELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKVL 252
ELVLERALDRE+ H LVL ASDGG+P S + I V VLD NDN P+F Q YRV V
Sbjct: 193 ELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVW 252
Query: 253 ENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEEC 312
ENVP GT LLT A+D DEG N +V+Y K+ K + +F LN +GE+S KSLDYE+
Sbjct: 253 ENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDA 312
Query: 313 SFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNAH 372
FYE++I+A+DG GL K+L++V DVNDN PE+TITSL S V E+ G I L + H
Sbjct: 313 MFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVH 372
Query: 373 DRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPPL 432
DRDSG+NGQV + NL F LE S + YYRL+TA LDRE+ SEYNI++ A+D G+PPL
Sbjct: 373 DRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPL 432
Query: 433 STEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSLA 492
STE HITL V DINDNPP F SYS Y+PENN RG SIFSV A DPDSN N+R+ Y+L
Sbjct: 433 STETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALT 492
Query: 493 EDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLFV 552
EDT+QG+PLS++VSINS+TGVLYAL SFDYEQFRDL++ VTASDSG+PPLSSNVSL LFV
Sbjct: 493 EDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFV 552
Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKAS 612
LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRL KAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDIL 672
EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVA+AD IPDIL
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDIL 672
Query: 673 ADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATSDGL 732
ADLGSL+ A SDLTLYLVVAVA VSCVFL FVI LLALRLR WH S LL+A+ GL
Sbjct: 673 ADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGGL 732
Query: 733 AGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLISQQSCEKNEPLC 792
A P SHFVG DGVRAFLQTYS E SLTADSRKSHLIFPQPNYADTLISQ+SCEK+EPL
Sbjct: 733 ASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEPLL 792
Query: 793 VSVDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI 852
++ D D+ L+ QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI
Sbjct: 793 ITQDLLEMKGDSNLLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI 852
Query: 853 LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD 912
LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD
Sbjct: 853 LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD 912
Query: 913 GKAPAGGNGNKKKSGKKEKK 932
GKAPAGGNGNKKKSGKKEKK
Sbjct: 913 GKAPAGGNGNKKKSGKKEKK 932
>gi|11128039 protocadherin gamma subfamily A, 11 isoform 1 precursor
[Homo sapiens]
Length = 935
Score = 1325 bits (3428), Expect = 0.0
Identities = 667/922 (72%), Positives = 764/922 (82%), Gaps = 2/922 (0%)
Query: 13 LVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVSRGRT 72
L+LLC LG L RA QIRYSVPEETEKG VGNISKDL LEPRELA+R VRIVSRG+T
Sbjct: 14 LLLLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPRELAKRGVRIVSRGKT 73
Query: 73 QLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDINDSAPK 132
QLF++NPRSG+L+TAGRIDREELC C +N ++LVED +K+YG+E+E+ DIND+AP
Sbjct: 74 QLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGVEVEIIDINDNAPS 133
Query: 133 FQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNGAINP 192
FQ + +E+K++E A+PGAR+ LP A DPDVGVNSLQSYQLSPN++FSL ++ +GA NP
Sbjct: 134 FQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFSLQLRGRTDGAKNP 193
Query: 193 ELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKVL 252
ELVLE +LDRE+ AH L+LTA DGG+P R V I V VLD ND+ P+F Q +YRV V
Sbjct: 194 ELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHIPMFTQSVYRVSVP 253
Query: 253 ENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEEC 312
EN+ GT +L A+D DEGING+V Y F + K S +FQL+ TGE+ SLD+E+
Sbjct: 254 ENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTGEVQVRGSLDFEKY 313
Query: 313 SFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNAH 372
FYEMEIQ +DGGGL T +LI+V DVNDN PE+TITS + + E++P GTVI L N
Sbjct: 314 RFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILENSPPGTVIALLNVQ 373
Query: 373 DRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPPL 432
D+DSG+NGQV C I +L F LE + +YY+L+T+++LDRE YNIT+TATD+G+PPL
Sbjct: 374 DQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYNITLTATDQGSPPL 433
Query: 433 STEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSLA 492
S E H+ L V D NDNPP F +SYS Y+PENN RG SIFSV A DPDS +N+ V YSL
Sbjct: 434 SAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDPDSKQNALVTYSLT 493
Query: 493 EDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLFV 552
+DT+QG PLS+YVSINS+TGVLYAL SFDYEQFRDL+++V A DSG PPLSSNVSL LFV
Sbjct: 494 DDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGDPPLSSNVSLSLFV 553
Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKAS 612
LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQNAWLSYRL KAS
Sbjct: 554 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKAS 613
Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDIL 672
EPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVA+ADSIP++L
Sbjct: 614 EPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVL 673
Query: 673 ADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATSDGL 732
ADLGSL+ A+ E SDL+LYLVVAVA VSC+FL FVI LLALRL WH S LL+A+ GL
Sbjct: 674 ADLGSLESLANSETSDLSLYLVVAVAAVSCIFLVFVIVLLALRLWRWHKSRLLQASEGGL 733
Query: 733 AGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLISQQSCEKNEPLC 792
AG+PTSHFVGVDGV+AFLQTYS E SL ADS+KSHLIFPQPNY DTLISQ+SCEK+EPL
Sbjct: 734 AGMPTSHFVGVDGVQAFLQTYSHEVSLIADSQKSHLIFPQPNYGDTLISQESCEKSEPLL 793
Query: 793 VSVDSKFPIE--DTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQA 850
++ DS + D QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQA
Sbjct: 794 IAEDSAIILGKCDPTSNQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQA 853
Query: 851 MILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGK 910
MILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGK
Sbjct: 854 MILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGK 913
Query: 911 RDGKAPAGGNGNKKKSGKKEKK 932
RDGKAPAGGNGNKKKSGKKEKK
Sbjct: 914 RDGKAPAGGNGNKKKSGKKEKK 935
>gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 1305 bits (3376), Expect = 0.0
Identities = 669/921 (72%), Positives = 747/921 (81%), Gaps = 1/921 (0%)
Query: 12 RLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVSRGR 71
RL+LLC L +L EA A I YSVPEET+KG VGNI+KDL L+P+ELA+ VRIVSRGR
Sbjct: 12 RLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRGR 71
Query: 72 TQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDINDSAP 131
LF+LNPRSG+L+TA RIDREELCAQS CLV+F +LVED++KL+ +E+E+ DIND+ P
Sbjct: 72 MPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNTP 131
Query: 132 KFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNGAIN 191
+FQ E LE K+NEI PG R LP D DVG+NSLQSYQLS N HFSL+VQ G +G +
Sbjct: 132 QFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQH 191
Query: 192 PELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKV 251
PE+VL+ LDREE HHL+LTASDGGEP RS T+RI++ V+D NDN P F Q Y + V
Sbjct: 192 PEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINV 251
Query: 252 LENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEE 311
ENVP GT LL A+D DEG NG+V Y F ++ + + +F+L+ TGEIS + LD+EE
Sbjct: 252 PENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFEE 311
Query: 312 CSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNA 371
Y ME+QA+DG GL KVLI V DVNDN PEVTITS+ + V E+ P GT+I L +
Sbjct: 312 YKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALISV 371
Query: 372 HDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPP 431
HD+DSG NG C I NL F LE ++YYRL+T + LDRE S YNIT+TA D+GTP
Sbjct: 372 HDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTPA 431
Query: 432 LSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSL 491
LSTE HI+L VTDINDN P F Q SYS Y+PENN RG SIFSV A+D DSNEN+++ YSL
Sbjct: 432 LSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYSL 491
Query: 492 AEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLF 551
EDTIQG+PLS Y+SINSDTGVLYAL SFDYEQFRD+Q++V A DSG PPLSSNVSL LF
Sbjct: 492 IEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSLF 551
Query: 552 VLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKA 611
+LDQNDNAPEILYPALPTDGSTGVELAP SAEPGYLVTKVVAVDRDSGQNAWLSYRL KA
Sbjct: 552 LLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKA 611
Query: 612 SEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDI 671
SEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVA+AD I DI
Sbjct: 612 SEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISDI 671
Query: 672 LADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATSDG 731
LADLGSL+ A SDLTLYLVVA A VSCVFL FVI LLA RLR WH S LL+A+ G
Sbjct: 672 LADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGG 731
Query: 732 LAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLISQQSCEKNEPL 791
LA +P SHFVGVDGVRAFLQTYS E SLTADSRKSHLIFPQPNYADTLISQ+SCEK L
Sbjct: 732 LASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKGFL 791
Query: 792 CVSVDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAM 851
+ S + P QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAM
Sbjct: 792 S-APQSLLEDKKEPFSQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAM 850
Query: 852 ILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKR 911
ILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKR
Sbjct: 851 ILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKR 910
Query: 912 DGKAPAGGNGNKKKSGKKEKK 932
DGKAPAGGNGNKKKSGKKEKK
Sbjct: 911 DGKAPAGGNGNKKKSGKKEKK 931
>gi|11056030 protocadherin gamma subfamily A, 2 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1300 bits (3365), Expect = 0.0
Identities = 667/932 (71%), Positives = 751/932 (80%)
Query: 1 MAAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELA 60
MAA K +LVLLC LL LWEARA QIRYSV EE ++G VGNI+KDL LEP LA
Sbjct: 1 MAALQKLPHCRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALA 60
Query: 61 ERRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIE 120
E+ VRIVSRGR+QLF+LNPRSG+LVTA RIDREELCAQS CL+NF +L+ED++ +Y +E
Sbjct: 61 EQGVRIVSRGRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVE 120
Query: 121 IEVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSL 180
+E+TDIND+AP+F E LE+KI+E PG R PL A D DVG N+LQ Y L+PN HFSL
Sbjct: 121 VEITDINDNAPRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSL 180
Query: 181 NVQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAP 240
+V+ G +G PELVLER+LDREE HHLVL ASDGG+P S T RI V VLD NDNAP
Sbjct: 181 DVRRGADGNKYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAP 240
Query: 241 VFAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGE 300
VF Q YR+ + EN GT +LT TA+D DEG +V Y K + S +F+L +GE
Sbjct: 241 VFTQPEYRISIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGE 300
Query: 301 ISTAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDA 360
++ K LDYE+ +F+E++I+A+DG GL KV+++V DVNDN PE +TS S V ED+
Sbjct: 301 LTIIKDLDYEDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDS 360
Query: 361 PQGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNI 420
GT+I LFN HDRDSG+N CS+ E+L F LE S ++YYRL+T + LDRE+ S YNI
Sbjct: 361 LPGTIIGLFNVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNI 420
Query: 421 TVTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPD 480
T+TA D G P LST+ HI LQV DINDN PAFS+ SYS Y+PENN RG S+FSV A+DPD
Sbjct: 421 TLTAKDGGNPSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPD 480
Query: 481 SNENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSP 540
SN+N+ V YS AEDT+QG+PLS+Y+SINSDTGVLYAL SFDYEQ RDLQ+ V A DSG+P
Sbjct: 481 SNDNAHVTYSFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNP 540
Query: 541 PLSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
PLSSNVSL LFVLDQNDNAPEILYPA PTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSY L KASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVA+QDHGQPPLSATVTL
Sbjct: 601 NAWLSYHLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTL 660
Query: 661 TVAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWH 720
TVA+AD IPDILADLGSL+ A SDLTLYLVVAVA VSCVFL FVI LLA RLR WH
Sbjct: 661 TVAVADRIPDILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWH 720
Query: 721 SSHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLI 780
S LL+A+ L G+ +SHFVGVDGVRAFLQTYS E SLTADSRKSHLIFPQPNYADTLI
Sbjct: 721 KSRLLQASGGSLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
Query: 781 SQQSCEKNEPLCVSVDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 840
SQ+SCEK + L + QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN
Sbjct: 781 SQESCEKKDFLSAPQSLLEEEREETFSQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 840
Query: 841 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900
NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS
Sbjct: 841 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900
Query: 901 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 901 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
>gi|7662056 protocadherin gamma subfamily A, 8 isoform 2 precursor
[Homo sapiens]
Length = 820
Score = 1230 bits (3182), Expect = 0.0
Identities = 627/796 (78%), Positives = 682/796 (85%)
Query: 1 MAAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELA 60
MAAP RG L+LLC+LLG LWE QIRYSVPEET+KG VGNISKDL L+PR+LA
Sbjct: 1 MAAPQSRPRRGELILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLA 60
Query: 61 ERRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIE 120
+ VRIVSRGRTQLF+LNPRSG+L+TAGRIDREELCAQSPRCL+N LVED+ KL+G+E
Sbjct: 61 KHGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVE 120
Query: 121 IEVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSL 180
IE+ DIND+ PKFQ E LEVKINEIAVPGARYPLPEA+DPDVGVNSLQSYQLSPNHHFSL
Sbjct: 121 IEIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSL 180
Query: 181 NVQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAP 240
+VQTGDNGAINPELVLERALDREE AHHLVLTASDGG+P RSSTVRIHVTVLDTNDNAP
Sbjct: 181 DVQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAP 240
Query: 241 VFAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGE 300
VF IYRVKVLEN+PPGT LLT TASD DEGINGKVAYKF KINEKQ+ LFQLNENTGE
Sbjct: 241 VFPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGE 300
Query: 301 ISTAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDA 360
IS AKSLDYEECSFYEMEIQAED G L G TK+LISVEDVNDNRPEV ITSLFSPV E++
Sbjct: 301 ISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENS 360
Query: 361 PQGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNI 420
GTVI + HD+DSGKNGQVVC ++NL F LE S +YYRL+T + LDRE S YNI
Sbjct: 361 LPGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNI 420
Query: 421 TVTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPD 480
TV A+D GTPPLSTE I L V DINDNPP F ASYS Y+ ENN RG SIFS+ A+DPD
Sbjct: 421 TVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPD 480
Query: 481 SNENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSP 540
S EN++V YS+ EDT+QG+PLS+Y+SINSDTGVLYAL SFDYEQ RDLQ+ VTASDSG P
Sbjct: 481 SQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDP 540
Query: 541 PLSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
PLSSN+SL LFVLDQNDNAPEILYPALPTDGSTGVELAPRSAE GYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSYRL KASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
Query: 661 TVAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWH 720
TVA+ADSIP++L +LGSL+ D S LTLYLVVAVA +SCVFL FV LL LRLR WH
Sbjct: 661 TVAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWH 720
Query: 721 SSHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLI 780
S LL+ + L GVP SHFVGV+ V+AFLQTYSQE SLTADSRKSHLIFPQPNYAD LI
Sbjct: 721 KSRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLI 780
Query: 781 SQQSCEKNEPLCVSVD 796
SQ+ CEKN+ L SVD
Sbjct: 781 SQEGCEKNDSLLTSVD 796
>gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precursor
[Homo sapiens]
Length = 850
Score = 1196 bits (3093), Expect = 0.0
Identities = 613/796 (77%), Positives = 666/796 (83%)
Query: 13 LVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVSRGRT 72
LVLLC G+ WEA A QI YS+PEE EKG VGNISKDL L PRELAER VRIVSRGRT
Sbjct: 17 LVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSRGRT 76
Query: 73 QLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDINDSAPK 132
QLFSLNPRSG+L+TAGRIDREELCAQS RC+V+F +LVEDRVKL+GIEIEVTDIND+APK
Sbjct: 77 QLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDNAPK 136
Query: 133 FQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNGAINP 192
FQAE+L+VKINE G R+PLPEAIDPDVGVNSLQSYQLSPN HFSL VQ+ NG P
Sbjct: 137 FQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGVKYP 196
Query: 193 ELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKVL 252
ELVLE +LDREE HHLVLTASDGG+P RS TV + VTV D NDNAPVF YRV V
Sbjct: 197 ELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRVSVP 256
Query: 253 ENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEEC 312
EN+P GT LLT TA+D DEG NG+V Y F K+ + Q L FQLN+ TGEI +++LDYEE
Sbjct: 257 ENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDYEET 316
Query: 313 SFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNAH 372
FYE+EIQAEDGG KVLI+VEDVNDN PE+TITSLFSPV ED+P GTV+ L N H
Sbjct: 317 GFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALLNVH 376
Query: 373 DRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPPL 432
D DS +NGQV CSI L F LE S + YYRL+ + LDRE+ S YNITVTATD G+PPL
Sbjct: 377 DLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGSPPL 436
Query: 433 STEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSLA 492
STE H LQV DINDNPP FSQ SY Y+PENNARG SIFSV A DPDS EN+++IYSLA
Sbjct: 437 STEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIYSLA 496
Query: 493 EDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLFV 552
EDTIQG PLS+Y+SINSDTGVLYAL SFDYEQF +LQMQVTASDSG PPLSSNVSL LFV
Sbjct: 497 EDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLSLFV 556
Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKAS 612
LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRL KAS
Sbjct: 557 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 616
Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDIL 672
EPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVA+ADSIP +L
Sbjct: 617 EPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVL 676
Query: 673 ADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATSDGL 732
ADLGS + PA+ E SDLTLYLVVAVA VSCVFL FVI LLA RLR WH S LL+A+ GL
Sbjct: 677 ADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGL 736
Query: 733 AGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLISQQSCEKNEPLC 792
GV SHFVGVDGVRAFLQTYS E SLTADSRKSHLIFPQPNYADTLISQ+SCEKN+PL
Sbjct: 737 TGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKNDPLS 796
Query: 793 VSVDSKFPIEDTPLVP 808
+ DSKFPIEDTPLVP
Sbjct: 797 LLDDSKFPIEDTPLVP 812
>gi|14196468 protocadherin gamma subfamily A, 4 isoform 2 precursor
[Homo sapiens]
Length = 820
Score = 1100 bits (2844), Expect = 0.0
Identities = 560/796 (70%), Positives = 641/796 (80%)
Query: 1 MAAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELA 60
MAAP RL+ +C LLG+L E RA QI YSV EE E+G +VGNI+KDL L PRELA
Sbjct: 1 MAAPPARPDHTRLLQICLLLGVLVEIRAEQILYSVFEEQEEGSVVGNIAKDLGLAPRELA 60
Query: 61 ERRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIE 120
ER VRIVSRGRTQLF+LNPRSGTLVTAGRIDREELC +SP C+ N ++L+ED VK+ +E
Sbjct: 61 ERGVRIVSRGRTQLFALNPRSGTLVTAGRIDREELCDRSPNCVTNLEILLEDTVKILRVE 120
Query: 121 IEVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSL 180
+E+ D+ND+ P F E E+K+ E PGAR+PLPEA DPDVGVNSLQ YQL+ N +FSL
Sbjct: 121 VEIIDVNDNPPSFGTEQREIKVAENENPGARFPLPEAFDPDVGVNSLQGYQLNSNGYFSL 180
Query: 181 NVQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAP 240
+VQ+G +G PELVLERALDREE HHLVLTA DGG+P RS T RI + ++DTNDNAP
Sbjct: 181 DVQSGADGIKYPELVLERALDREEEAVHHLVLTAFDGGDPVRSGTARILIILVDTNDNAP 240
Query: 241 VFAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGE 300
VF Q Y V V ENVP GT LLT A+D DEG NG V Y F K+ +K S LFQLN +G+
Sbjct: 241 VFTQPEYHVSVRENVPVGTRLLTVKATDPDEGANGDVTYSFRKVRDKISQLFQLNSLSGD 300
Query: 301 ISTAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDA 360
I+ LDYE+ FY+++++A DG GL+ +KVL++V D NDN PEVT+TSL S V+E +
Sbjct: 301 ITILGGLDYEDSGFYDIDVEAHDGPGLRARSKVLVTVLDENDNAPEVTVTSLTSSVQESS 360
Query: 361 PQGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNI 420
GTVI LFN HD DSG NG V CSI +NL FTLE + +YYRLLT + LDRE+ SEYNI
Sbjct: 361 SPGTVIALFNVHDSDSGGNGLVTCSIPDNLPFTLEKTYGNYYRLLTHRTLDREEVSEYNI 420
Query: 421 TVTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPD 480
TVTATD+GTPPLSTE HI+LQV DINDNPP F ASYS Y+PENN RG SI S+ A DPD
Sbjct: 421 TVTATDQGTPPLSTETHISLQVMDINDNPPTFPHASYSAYIPENNPRGASILSMTAQDPD 480
Query: 481 SNENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSP 540
S +N+R+ YSLAEDT QG+PLS+YVSINS+TG+LYALCSFDYEQFRDLQ+ +TASDSG P
Sbjct: 481 SGDNARITYSLAEDTFQGAPLSSYVSINSNTGILYALCSFDYEQFRDLQLLMTASDSGDP 540
Query: 541 PLSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
PLSSNVSL LFVLDQNDN PEILYP PTDGSTGVELAPRSA+ GYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNVPEILYPTFPTDGSTGVELAPRSADSGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSY L K+SEPGLF+VGLHTGEVRTARALLDRDALKQ LVV VQDHGQPPLSATVTL
Sbjct: 601 NAWLSYSLLKSSEPGLFAVGLHTGEVRTARALLDRDALKQRLVVVVQDHGQPPLSATVTL 660
Query: 661 TVAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWH 720
TVA+ADSIPD+LADLGSL+ AD + S LTLYLVVAVA VSCVFL FV LLAL+LR WH
Sbjct: 661 TVAVADSIPDVLADLGSLKPSADPDDSGLTLYLVVAVAAVSCVFLAFVTVLLALKLRRWH 720
Query: 721 SSHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLI 780
S LL A LAGVP SHFVGVDGVRAFLQTYS E SLTADSRKSHLIF QP+YADTLI
Sbjct: 721 KSRLLHAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFSQPSYADTLI 780
Query: 781 SQQSCEKNEPLCVSVD 796
S++SCEK+EPL ++ D
Sbjct: 781 SRESCEKSEPLLITQD 796
>gi|14196457 protocadherin gamma subfamily A, 12 isoform 2 precursor
[Homo sapiens]
Length = 820
Score = 1095 bits (2832), Expect = 0.0
Identities = 561/795 (70%), Positives = 643/795 (80%)
Query: 13 LVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVSRGRT 72
LVLL LLG LWE +QIRYSVPEE EKG VG+IS+DL LEPRELAER VRI+ RGRT
Sbjct: 13 LVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRT 72
Query: 73 QLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDINDSAPK 132
QLF+LNPRSG+LVTAGRIDREELC + +C +N +L+ED+VK+YG+E+EV DIND+AP
Sbjct: 73 QLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPY 132
Query: 133 FQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNGAINP 192
F+ LE+KI+E A R+PLP A DPD+G NSLQSY+LSPN HFSL VQ G +G+ P
Sbjct: 133 FRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYP 192
Query: 193 ELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKVL 252
ELVL+RALDREE AHHLVLTASDGG+P R+ T RI V VLD NDNAP FAQ YR V
Sbjct: 193 ELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVP 252
Query: 253 ENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEEC 312
EN+ GT LL A+D DEG+N +V Y F +++K + +F+L+ N+G IST LD+EE
Sbjct: 253 ENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHEES 312
Query: 313 SFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNAH 372
FY+ME+QA D G KVLI+V DVNDN PEV +TSL S V E++P+GT+I L N +
Sbjct: 313 GFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNVN 372
Query: 373 DRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPPL 432
D+DS +NGQV+C IQ NL F LE S +YY L+T +LDRE+ YNITVTATDRGTPPL
Sbjct: 373 DQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPPL 432
Query: 433 STEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSLA 492
STE HI+L V D NDNPP F QASYS Y+PENN RG S+ SV A+DPD EN+++ YSLA
Sbjct: 433 STETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLA 492
Query: 493 EDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLFV 552
E+TIQG+ LS+YVSINSDTGVLYAL SFDYEQFRDLQ++V A D+G PPLSSNVSL LFV
Sbjct: 493 ENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFV 552
Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKAS 612
LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRL KAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDIL 672
EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVA+ADSIP +L
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVL 672
Query: 673 ADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATSDGL 732
ADLGSL+ PA+ E SDLTLYLVVAVA VSCVFL FVI LLALRLR WH S LL+A+ GL
Sbjct: 673 ADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQASGGGL 732
Query: 733 AGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLISQQSCEKNEPLC 792
G P SHFVGVDGV+AFLQTYS E SLT DSRKSHLIFPQPNYAD L+SQ+S EK+EPL
Sbjct: 733 TGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEKSEPLL 792
Query: 793 VSVDSKFPIEDTPLV 807
+S DS F + L+
Sbjct: 793 LSGDSVFSKDSHGLI 807
>gi|14196471 protocadherin gamma subfamily A, 5 isoform 2 precursor
[Homo sapiens]
Length = 813
Score = 1093 bits (2827), Expect = 0.0
Identities = 562/794 (70%), Positives = 641/794 (80%)
Query: 1 MAAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELA 60
MA+P + G L+L LLG L E + QIRYS+PEE +KG VGNI+KDL LEP+ELA
Sbjct: 1 MASPPRGWGCGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELA 60
Query: 61 ERRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIE 120
ER VRIVSRGRTQLF+LNPRSG+LVTAGRIDREELCAQSP C+VNF +LVE+++K+YG+E
Sbjct: 61 ERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVE 120
Query: 121 IEVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSL 180
+E+ DIND+ P+F+ E L+VK+NE A G R LP A D DVGVNSL+SYQLS N HFSL
Sbjct: 121 VEIIDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSL 180
Query: 181 NVQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAP 240
+V +G +G PELVLE+ LDRE+ T H L+LTA DGG+P S T I VTVLD NDNAP
Sbjct: 181 DVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAP 240
Query: 241 VFAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGE 300
+F Y V V EN+P GT LL TA+D DEGINGK+ Y F EK S FQL+ N GE
Sbjct: 241 LFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGE 300
Query: 301 ISTAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDA 360
IST +SLDYEE FY ME+ A+DGG L KV+++V+DVNDN PEV +TSL S + ED
Sbjct: 301 ISTLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDC 360
Query: 361 PQGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNI 420
GTVI LF+ HD DSG+NG++ CSI NL F LE S ++YY LLT + LDRE+ S+YNI
Sbjct: 361 LPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNI 420
Query: 421 TVTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPD 480
T+T D GTPPLSTE HI L+V D+NDNPP F QASYS + ENN RG SIFSV A+DPD
Sbjct: 421 TLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPD 480
Query: 481 SNENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSP 540
S +N+RV YSLAEDT QG+PLS+YVSINSDTGVLYAL SFDYEQ RDLQ+ VTASDSG+P
Sbjct: 481 SGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNP 540
Query: 541 PLSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
PLSSNVSL LFVLDQNDN PEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQ 600
Query: 601 NAWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSYRL KASEPGLF+VGLHTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+
Sbjct: 601 NAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTV 660
Query: 661 TVAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWH 720
TVA+AD IPDILADLGS++ P D E DLTLYLVVAVA VSCVFL FVI LL LRLR WH
Sbjct: 661 TVAVADRIPDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWH 720
Query: 721 SSHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLI 780
S LL+A LAGVP SHFVGVDGVRAFLQTYS E SLTADSRKSHLIFPQPNYADTL+
Sbjct: 721 KSRLLQAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLL 780
Query: 781 SQQSCEKNEPLCVS 794
S++SCEK+EPL +S
Sbjct: 781 SEESCEKSEPLLMS 794
>gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precursor
[Homo sapiens]
Length = 817
Score = 1091 bits (2821), Expect = 0.0
Identities = 567/810 (70%), Positives = 643/810 (79%), Gaps = 1/810 (0%)
Query: 2 AAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAE 61
A P RG LL LLG WEA A +I YSV EET+KG VG+I+KDL LEPRELAE
Sbjct: 3 AQPRGGDYRG-FFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAE 61
Query: 62 RRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEI 121
R VRI+SRGRTQLF+LN RSG+LVTAGRIDREE+CAQS RCLVNF +L+ED++ LY I++
Sbjct: 62 RGVRIISRGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDV 121
Query: 122 EVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLN 181
E+ DIND+ P+F E + VKI E PG R+PL EA DPDVG NSLQSYQLSPN HFSL
Sbjct: 122 EIIDINDNVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLA 181
Query: 182 VQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPV 241
VQ+GD+ PELVLER LDREE HHLVLTASDGG+P RSST I VTV+D ND+ PV
Sbjct: 182 VQSGDDETKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPV 241
Query: 242 FAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEI 301
F+ Y+V V ENVP GT LLT A DLDEG+NG+V Y F KI K +F LN TGEI
Sbjct: 242 FSLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEI 301
Query: 302 STAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAP 361
ST + LDYEE +FYEME+QA+DG G KVLI+V DVNDN PEVT+TSL S + ED P
Sbjct: 302 STLEGLDYEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTP 361
Query: 362 QGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNIT 421
GTVI LF DRDSGKNG+V C+I ENL F LE S ++YYRL+T + LDRE S YNIT
Sbjct: 362 LGTVIALFYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNIT 421
Query: 422 VTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDS 481
+ ATD GTPPLS E HI +QV D NDNPP F +SYSVY+ ENN RG SIF V A D DS
Sbjct: 422 LKATDGGTPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDS 481
Query: 482 NENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPP 541
+N+++ YSLAEDTIQG+P+S+YVSINSDTGVLYAL SFDYEQ R+LQ++VTA DSG PP
Sbjct: 482 EDNAQITYSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPP 541
Query: 542 LSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQN 601
LSSN+SL LFVLDQNDN PEILYPALPTDGSTG+ELAPRSAEPGYLVTKVVAVD+DSGQN
Sbjct: 542 LSSNMSLSLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQN 601
Query: 602 AWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLT 661
AWLSY L KASEPGLF+VGL+TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLT
Sbjct: 602 AWLSYLLLKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLT 661
Query: 662 VAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHS 721
VA+ADSIP++LADLGSL+ DLTLYLVVAVA VSCVFL FV+ LLALRLR WH
Sbjct: 662 VAVADSIPEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHK 721
Query: 722 SHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLIS 781
S LL+A+ GLA VPTSHFVG+DGV+AFLQTYS E SLTADSRKSHLIFPQPNY D LIS
Sbjct: 722 SRLLQASEGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLIS 781
Query: 782 QQSCEKNEPLCVSVDSKFPIEDTPLVPQAP 811
Q+SCEKN+ L SVD + E+ P + +P
Sbjct: 782 QESCEKNDSLLTSVDFQECKENLPSIQVSP 811
>gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precursor
[Homo sapiens]
Length = 818
Score = 1085 bits (2807), Expect = 0.0
Identities = 563/796 (70%), Positives = 640/796 (80%)
Query: 1 MAAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELA 60
MA P + R VLL +LLG LW A A+QIRYS+PEE EKG VGNI KDL LEP+ELA
Sbjct: 1 MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA 60
Query: 61 ERRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIE 120
E VRIVSRGR QLFSLNPR+G+LVTAGRIDREELCAQSPRCLV+F +LVED++ LY +E
Sbjct: 61 EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE 120
Query: 121 IEVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSL 180
+E+ DIND+ P+F E LEVKI E A P +R+PL E DPDVG+NSLQ ++LS N HFS+
Sbjct: 121 VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV 180
Query: 181 NVQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAP 240
+VQ+ +G PELVLE LDRE + LVLTA DGG+P RSS +I VTVLD NDN P
Sbjct: 181 DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP 240
Query: 241 VFAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGE 300
+F Q +YRV V EN+P GT +L TA+D DEG++G+V Y F KI EK S +F LN TGE
Sbjct: 241 MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE 300
Query: 301 ISTAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDA 360
IST+ +LDYE+ SFYE+ ++A DG GL+ KVLI++ DVNDN PEV +TS + E A
Sbjct: 301 ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA 360
Query: 361 PQGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNI 420
P GTVI LF DRDSG NG V CSI +L F LE S +YYRL+T LDRE+ YNI
Sbjct: 361 PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI 420
Query: 421 TVTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPD 480
TVTATD+GTPPLSTE I+L V D NDNPP F +SYSVY+ ENN RG SIFSV A DPD
Sbjct: 421 TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD 480
Query: 481 SNENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSP 540
++N++V YSLAEDT+QG+PLS+YVSINSDTG+LYAL SFDYEQ RDLQ+ VTASDSG P
Sbjct: 481 VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP 540
Query: 541 PLSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
PLSSNVSL LFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSYRL KASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
Query: 661 TVAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWH 720
TVA+AD IPDILADLGSL+ A SDLTLYLVVAVA VSCVFL FVI LLALRL+ WH
Sbjct: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWH 720
Query: 721 SSHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLI 780
S LL+A+ GLA +P SHFVGV+GVRAFLQTYS E SLTADSRKSHLIFPQPNYADTLI
Sbjct: 721 KSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
Query: 781 SQQSCEKNEPLCVSVD 796
+Q+S EK+EPL ++ D
Sbjct: 781 NQESYEKSEPLLITQD 796
>gi|14196465 protocadherin gamma subfamily A, 3 isoform 2 precursor
[Homo sapiens]
Length = 829
Score = 1081 bits (2795), Expect = 0.0
Identities = 555/784 (70%), Positives = 630/784 (80%)
Query: 13 LVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVSRGRT 72
L LLC+LLG L E + QIRYSV EE +KG VGNI+ DL LEPRELAER VRIVSRGRT
Sbjct: 13 LALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGRT 72
Query: 73 QLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDINDSAPK 132
QLFSLNP+SG+LVTA RIDREELCAQ P CLV +LVED++K++ +EIE+ DIND+AP
Sbjct: 73 QLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAPN 132
Query: 133 FQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNGAINP 192
F E LE+KI E+ VPG R+P+ A DPDVG+NSLQ+Y+LSPN +FSL V + GA P
Sbjct: 133 FPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKYP 192
Query: 193 ELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKVL 252
ELVLERALDRE+ H LVL ASDGG+P S + I V VLD NDN P+F Q YRV V
Sbjct: 193 ELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVW 252
Query: 253 ENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEEC 312
ENVP GT LLT A+D DEG N +V+Y K+ K + +F LN +GE+S KSLDYE+
Sbjct: 253 ENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDA 312
Query: 313 SFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNAH 372
FYE++I+A+DG GL K+L++V DVNDN PE+TITSL S V E+ G I L + H
Sbjct: 313 MFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVH 372
Query: 373 DRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPPL 432
DRDSG+NGQV + NL F LE S + YYRL+TA LDRE+ SEYNI++ A+D G+PPL
Sbjct: 373 DRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPL 432
Query: 433 STEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSLA 492
STE HITL V DINDNPP F SYS Y+PENN RG SIFSV A DPDSN N+R+ Y+L
Sbjct: 433 STETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALT 492
Query: 493 EDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLFV 552
EDT+QG+PLS++VSINS+TGVLYAL SFDYEQFRDL++ VTASDSG+PPLSSNVSL LFV
Sbjct: 493 EDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFV 552
Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKAS 612
LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRL KAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDIL 672
EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVA+AD IPDIL
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDIL 672
Query: 673 ADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATSDGL 732
ADLGSL+ A SDLTLYLVVAVA VSCVFL FVI LLALRLR WH S LL+A+ GL
Sbjct: 673 ADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGGL 732
Query: 733 AGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLISQQSCEKNEPLC 792
A P SHFVG DGVRAFLQTYS E SLTADSRKSHLIFPQPNYADTLISQ+SCEK+EPL
Sbjct: 733 ASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEPLL 792
Query: 793 VSVD 796
++ D
Sbjct: 793 ITQD 796
>gi|14196451 protocadherin gamma subfamily A, 11 isoform 2 precursor
[Homo sapiens]
Length = 837
Score = 1078 bits (2787), Expect = 0.0
Identities = 542/785 (69%), Positives = 638/785 (81%)
Query: 13 LVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVSRGRT 72
L+LLC LG L RA QIRYSVPEETEKG VGNISKDL LEPRELA+R VRIVSRG+T
Sbjct: 14 LLLLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPRELAKRGVRIVSRGKT 73
Query: 73 QLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDINDSAPK 132
QLF++NPRSG+L+TAGRIDREELC C +N ++LVED +K+YG+E+E+ DIND+AP
Sbjct: 74 QLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGVEVEIIDINDNAPS 133
Query: 133 FQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNGAINP 192
FQ + +E+K++E A+PGAR+ LP A DPDVGVNSLQSYQLSPN++FSL ++ +GA NP
Sbjct: 134 FQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFSLQLRGRTDGAKNP 193
Query: 193 ELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKVL 252
ELVLE +LDRE+ AH L+LTA DGG+P R V I V VLD ND+ P+F Q +YRV V
Sbjct: 194 ELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHIPMFTQSVYRVSVP 253
Query: 253 ENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEEC 312
EN+ GT +L A+D DEGING+V Y F + K S +FQL+ TGE+ SLD+E+
Sbjct: 254 ENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTGEVQVRGSLDFEKY 313
Query: 313 SFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNAH 372
FYEMEIQ +DGGGL T +LI+V DVNDN PE+TITS + + E++P GTVI L N
Sbjct: 314 RFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILENSPPGTVIALLNVQ 373
Query: 373 DRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPPL 432
D+DSG+NGQV C I +L F LE + +YY+L+T+++LDRE YNIT+TATD+G+PPL
Sbjct: 374 DQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYNITLTATDQGSPPL 433
Query: 433 STEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSLA 492
S E H+ L V D NDNPP F +SYS Y+PENN RG SIFSV A DPDS +N+ V YSL
Sbjct: 434 SAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDPDSKQNALVTYSLT 493
Query: 493 EDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLFV 552
+DT+QG PLS+YVSINS+TGVLYAL SFDYEQFRDL+++V A DSG PPLSSNVSL LFV
Sbjct: 494 DDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGDPPLSSNVSLSLFV 553
Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKAS 612
LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQNAWLSYRL KAS
Sbjct: 554 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKAS 613
Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDIL 672
EPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVA+ADSIP++L
Sbjct: 614 EPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVL 673
Query: 673 ADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATSDGL 732
ADLGSL+ A+ E SDL+LYLVVAVA VSC+FL FVI LLALRL WH S LL+A+ GL
Sbjct: 674 ADLGSLESLANSETSDLSLYLVVAVAAVSCIFLVFVIVLLALRLWRWHKSRLLQASEGGL 733
Query: 733 AGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLISQQSCEKNEPLC 792
AG+PTSHFVGVDGV+AFLQTYS E SL ADS+KSHLIFPQPNY DTLISQ+SCEK+EPL
Sbjct: 734 AGMPTSHFVGVDGVQAFLQTYSHEVSLIADSQKSHLIFPQPNYGDTLISQESCEKSEPLL 793
Query: 793 VSVDS 797
++ DS
Sbjct: 794 IAEDS 798
>gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precursor
[Homo sapiens]
Length = 823
Score = 1056 bits (2732), Expect = 0.0
Identities = 546/793 (68%), Positives = 624/793 (78%), Gaps = 4/793 (0%)
Query: 12 RLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVSRGR 71
RL+LLC L +L EA A I YSVPEET+KG VGNI+KDL L+P+ELA+ VRIVSRGR
Sbjct: 12 RLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRGR 71
Query: 72 TQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDINDSAP 131
LF+LNPRSG+L+TA RIDREELCAQS CLV+F +LVED++KL+ +E+E+ DIND+ P
Sbjct: 72 MPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNTP 131
Query: 132 KFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNGAIN 191
+FQ E LE K+NEI PG R LP D DVG+NSLQSYQLS N HFSL+VQ G +G +
Sbjct: 132 QFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQH 191
Query: 192 PELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKV 251
PE+VL+ LDREE HHL+LTASDGGEP RS T+RI++ V+D NDN P F Q Y + V
Sbjct: 192 PEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINV 251
Query: 252 LENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEE 311
ENVP GT LL A+D DEG NG+V Y F ++ + + +F+L+ TGEIS + LD+EE
Sbjct: 252 PENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFEE 311
Query: 312 CSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNA 371
Y ME+QA+DG GL KVLI V DVNDN PEVTITS+ + V E+ P GT+I L +
Sbjct: 312 YKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALISV 371
Query: 372 HDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPP 431
HD+DSG NG C I NL F LE ++YYRL+T + LDRE S YNIT+TA D+GTP
Sbjct: 372 HDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTPA 431
Query: 432 LSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSL 491
LSTE HI+L VTDINDN P F Q SYS Y+PENN RG SIFSV A+D DSNEN+++ YSL
Sbjct: 432 LSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYSL 491
Query: 492 AEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLF 551
EDTIQG+PLS Y+SINSDTGVLYAL SFDYEQFRD+Q++V A DSG PPLSSNVSL LF
Sbjct: 492 IEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSLF 551
Query: 552 VLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKA 611
+LDQNDNAPEILYPALPTDGSTGVELAP SAEPGYLVTKVVAVDRDSGQNAWLSYRL KA
Sbjct: 552 LLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKA 611
Query: 612 SEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDI 671
SEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVA+AD I DI
Sbjct: 612 SEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISDI 671
Query: 672 LADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATSDG 731
LADLGSL+ A SDLTLYLVVA A VSCVFL FVI LLA RLR WH S LL+A+ G
Sbjct: 672 LADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGG 731
Query: 732 LAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLISQQSCEK---- 787
LA +P SHFVGVDGVRAFLQTYS E SLTADSRKSHLIFPQPNYADTLISQ+SCEK
Sbjct: 732 LASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKGFL 791
Query: 788 NEPLCVSVDSKFP 800
+ P + D K P
Sbjct: 792 SAPQSLLEDKKEP 804
>gi|14196462 protocadherin gamma subfamily A, 2 isoform 2 precursor
[Homo sapiens]
Length = 823
Score = 1053 bits (2723), Expect = 0.0
Identities = 542/789 (68%), Positives = 625/789 (79%)
Query: 1 MAAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELA 60
MAA K +LVLLC LL LWEARA QIRYSV EE ++G VGNI+KDL LEP LA
Sbjct: 1 MAALQKLPHCRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALA 60
Query: 61 ERRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIE 120
E+ VRIVSRGR+QLF+LNPRSG+LVTA RIDREELCAQS CL+NF +L+ED++ +Y +E
Sbjct: 61 EQGVRIVSRGRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVE 120
Query: 121 IEVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSL 180
+E+TDIND+AP+F E LE+KI+E PG R PL A D DVG N+LQ Y L+PN HFSL
Sbjct: 121 VEITDINDNAPRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSL 180
Query: 181 NVQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAP 240
+V+ G +G PELVLER+LDREE HHLVL ASDGG+P S T RI V VLD NDNAP
Sbjct: 181 DVRRGADGNKYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAP 240
Query: 241 VFAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGE 300
VF Q YR+ + EN GT +LT TA+D DEG +V Y K + S +F+L +GE
Sbjct: 241 VFTQPEYRISIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGE 300
Query: 301 ISTAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDA 360
++ K LDYE+ +F+E++I+A+DG GL KV+++V DVNDN PE +TS S V ED+
Sbjct: 301 LTIIKDLDYEDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDS 360
Query: 361 PQGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNI 420
GT+I LFN HDRDSG+N CS+ E+L F LE S ++YYRL+T + LDRE+ S YNI
Sbjct: 361 LPGTIIGLFNVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNI 420
Query: 421 TVTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPD 480
T+TA D G P LST+ HI LQV DINDN PAFS+ SYS Y+PENN RG S+FSV A+DPD
Sbjct: 421 TLTAKDGGNPSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPD 480
Query: 481 SNENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSP 540
SN+N+ V YS AEDT+QG+PLS+Y+SINSDTGVLYAL SFDYEQ RDLQ+ V A DSG+P
Sbjct: 481 SNDNAHVTYSFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNP 540
Query: 541 PLSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
PLSSNVSL LFVLDQNDNAPEILYPA PTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSY L KASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVA+QDHGQPPLSATVTL
Sbjct: 601 NAWLSYHLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTL 660
Query: 661 TVAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWH 720
TVA+AD IPDILADLGSL+ A SDLTLYLVVAVA VSCVFL FVI LLA RLR WH
Sbjct: 661 TVAVADRIPDILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWH 720
Query: 721 SSHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLI 780
S LL+A+ L G+ +SHFVGVDGVRAFLQTYS E SLTADSRKSHLIFPQPNYADTLI
Sbjct: 721 KSRLLQASGGSLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
Query: 781 SQQSCEKNE 789
SQ+SCEK +
Sbjct: 781 SQESCEKKD 789
>gi|11128035 protocadherin gamma subfamily B, 2 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 926 bits (2393), Expect = 0.0
Identities = 490/941 (52%), Positives = 636/941 (67%), Gaps = 22/941 (2%)
Query: 2 AAPTKCQL-RGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELA 60
A+ +C L R VLL LL + A QIRYS+PEE K +VGN++KDL L R+L
Sbjct: 3 ASSGRCGLVRWLQVLLPFLLSLFPGALPVQIRYSIPEELAKNSVVGNLAKDLGLSVRDLP 62
Query: 61 ERRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIE 120
R++R+ + + F++NP SG L+ + RIDRE++C + P C+++F + E+ + ++ I
Sbjct: 63 ARKLRVSAE--KEYFTVNPESGDLLVSDRIDREQICGKQPLCVLDFDTVAENPLNIFYIA 120
Query: 121 IEVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSL 180
+ V DIND+ P F+ + +KI E PG +PL A+D DVG NSLQ Y L+ N +F L
Sbjct: 121 VIVQDINDNTPLFKQTKINLKIGESTKPGTTFPLDPALDSDVGPNSLQRYHLNDNEYFDL 180
Query: 181 NVQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAP 240
+ +G PEL+L+ +LDREE + H LVLTA DGG+P +S T +I + V D NDN P
Sbjct: 181 AEKQTPDGRKYPELILKHSLDREEHSLHQLVLTAVDGGDPPQSGTTQIRIKVTDANDNPP 240
Query: 241 VFAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGE 300
VF+Q +YRV + E+VPPG ++L TA+D DEGIN ++ Y F ++E+ F LNE TGE
Sbjct: 241 VFSQDVYRVTLREDVPPGFFVLQVTATDRDEGINAEITYSFHNVDEQVKHFFNLNEKTGE 300
Query: 301 ISTAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDA 360
I+T LD+E S Y + I+A+D G L + + + D ND PEV +TS+ +P+ ED+
Sbjct: 301 ITTKDDLDFEIASSYTLSIEAKDPGDLAAHCSIQVEILDDNDCAPEVIVTSVSTPLPEDS 360
Query: 361 PQGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNI 420
P GTVI L DRDSG+NG+V C + N F L++S ++YY+L+T LDRE+ EYN+
Sbjct: 361 PPGTVIALIKTRDRDSGENGEVYCQVLGNAKFILKSSSKNYYKLVTDGALDREEIPEYNL 420
Query: 421 TVTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPD 480
T+TATD G PPLS+ I +TL ++D+NDN P F Q SY V++ ENN G SI + A DPD
Sbjct: 421 TITATDGGKPPLSSSIIVTLHISDVNDNAPVFQQTSYMVHVAENNPPGASIAQISASDPD 480
Query: 481 SNENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSP 540
+ +V YS+ ++ + +YVS+++ +GV++A +FD+EQ R ++ + A D GSP
Sbjct: 481 LGPSGQVSYSIVASDLKPREILSYVSVSAQSGVVFAQRAFDHEQLRAFELTLQARDQGSP 540
Query: 541 PLSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
LS+NVSLR+ V D NDNAP +LYPAL DGS ++ PR+AEPGYLVTKVVAVD DSG
Sbjct: 541 ALSANVSLRVLVGDLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGH 600
Query: 601 NAWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSY + +ASEPGLFS+GL TGEVRTARAL DRDA +Q L+VAV+D GQPPLSAT TL
Sbjct: 601 NAWLSYHVLQASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATL 660
Query: 661 TVAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWH 720
+ ADS+ ++L DL + P+D +A L YLVVA+A++S +F VI ++LRLR
Sbjct: 661 HLIFADSLQEVLPDLSDRREPSDPQAK-LQFYLVVALALISVLFFLAVILAISLRLRLSS 719
Query: 721 SSHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQ-----EFSLTADSRKSHLIFPQPNY 775
S GL+ P L YS+ ++L S+ + F N
Sbjct: 720 RSDAWDCFQPGLSSKPGP---------GVLPNYSEGTLPYSYNLCVASQSAKTEFNFLNI 770
Query: 776 ADTLISQQS--CEKN--EPLCVSVDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQN 831
L+ Q C+ E + P ++ QAPPNTDWRFSQAQRPGTSGSQN
Sbjct: 771 TPELVPAQDLVCDNASWEQNTNHGAAGVPFASDTILKQAPPNTDWRFSQAQRPGTSGSQN 830
Query: 832 GDDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDY 891
GDDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDY
Sbjct: 831 GDDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDY 890
Query: 892 RQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
RQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 891 RQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 931
>gi|11128031 protocadherin gamma subfamily B, 5 isoform 1 precursor
[Homo sapiens]
Length = 923
Score = 922 bits (2384), Expect = 0.0
Identities = 492/929 (52%), Positives = 628/929 (67%), Gaps = 31/929 (3%)
Query: 14 VLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVSRGRTQ 73
VL LL + A QIRY +PEE KG +VGN++ DL +EL R++R+ S
Sbjct: 16 VLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQELPTRKLRVSSE--KP 73
Query: 74 LFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDINDSAPKF 133
F+++ SG L+ + R+DREE+C + P C + F+ + E+ + Y + +E+ DIND PKF
Sbjct: 74 YFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVNVEIEDINDHTPKF 133
Query: 134 QAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNGAINPE 193
S E++I+E A PG R+ L A D D+G+NSLQ Y+LS N FSL ++ +G+ PE
Sbjct: 134 TQNSFELQISESAQPGTRFILEVAEDADIGLNSLQKYKLSLNPSFSLIIKEKQDGSKYPE 193
Query: 194 LVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKVLE 253
L LE+ LDRE+ + H LVLTA DGG P S T + + V D NDN PVF + +YRV + E
Sbjct: 194 LALEKTLDREQQSYHRLVLTALDGGHPPLSGTTELRIQVTDANDNPPVFNRDVYRVSLRE 253
Query: 254 NVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEECS 313
NVPPGT +L +A+D DEGIN ++ Y F++ + +F LN +GEI+T K LD+EE
Sbjct: 254 NVPPGTTVLQVSATDQDEGINSEITYSFYRTGQ----IFSLNSKSGEITTQKKLDFEETK 309
Query: 314 FYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNAHD 373
Y M ++ DGGGL V I+++D NDN PEVT SL + E+A GT+I L HD
Sbjct: 310 EYSMVVEGRDGGGLVAQCTVEINIQDENDNSPEVTFHSLLEMILENAVPGTLIALIKIHD 369
Query: 374 RDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPPLS 433
+DSG+NG+V C +Q + F + +S ++ Y+L+T LDRE+ EYN+T+TATDRG PPLS
Sbjct: 370 QDSGENGEVNCQLQGEVPFKIISSSKNSYKLVTDGTLDREQTPEYNVTITATDRGKPPLS 429
Query: 434 TEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSLAE 493
+ I + L + D+NDN P F QASY V +PENN G SI V A D D N +V YS+
Sbjct: 430 SSISVILHIRDVNDNAPVFHQASYLVSVPENNPPGASIAQVCASDLDLGLNGQVSYSIMA 489
Query: 494 DTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLFVL 553
++ L++YVS+++ +GV++A +FDYEQ R ++ + A D GSP LS+NVSLR+ V
Sbjct: 490 SDLEPLALASYVSMSAQSGVVFAQRAFDYEQLRTFELTLQARDQGSPALSANVSLRVLVG 549
Query: 554 DQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKASE 613
D+NDNAP +LYPAL DGS ++ PR+AEPGYLVTKVVAVD DSG NAWLSY + +ASE
Sbjct: 550 DRNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASE 609
Query: 614 PGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDILA 673
PGLFS+GL TGEVRTARAL DRDA +Q L+VAV+D GQPPLSAT TL + ADS+ ++L
Sbjct: 610 PGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLVFADSLQEVLP 669
Query: 674 DLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATSDGLA 733
D+ +P+D +A +L YLVVA+A++S +FL VI +ALRLR S GL
Sbjct: 670 DITDRPVPSDPQA-ELQFYLVVALALISVLFLLAVILAVALRLRRSSSPAAWSCFQPGLC 728
Query: 734 -----GVPTSHFVGVDGVRAFLQTYSQEFSL-TADSRKSHLIF----PQPNYADTLISQQ 783
VP ++ G T ++L A + K+ F Q + ++
Sbjct: 729 VKSGPVVPPNYSQG---------TLPYSYNLCVAHTGKTEFNFLKCSEQLSSGQDILCGD 779
Query: 784 SCEKNEPLCVSVDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQF 843
S PLC S +S E QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQF
Sbjct: 780 SSGALFPLCNSSESTSHPE-----LQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQF 834
Query: 844 DTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNAT 903
DTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNAT
Sbjct: 835 DTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNAT 894
Query: 904 LTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
LTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 895 LTNAAGKRDGKAPAGGNGNKKKSGKKEKK 923
>gi|11128027 protocadherin gamma subfamily B, 7 isoform 1 precursor
[Homo sapiens]
Length = 929
Score = 920 bits (2378), Expect = 0.0
Identities = 482/928 (51%), Positives = 632/928 (68%), Gaps = 19/928 (2%)
Query: 12 RLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVSRGR 71
R VL LL + + IRYS+PEE KG +VGN++KDL L +++ R +R+ +
Sbjct: 14 RQVLFPLLLPLFYPTLCEPIRYSIPEELAKGSVVGNLAKDLGLSVLDVSARELRVSAEKL 73
Query: 72 TQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDINDSAP 131
FS++ +SG L+ RIDRE++C + RC + + +VE+ + ++ + + + D+ND AP
Sbjct: 74 H--FSVDAQSGDLLVKDRIDREQICKERRRCELQLEAVVENPLNIFHVIVVIEDVNDHAP 131
Query: 132 KFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNGAIN 191
+F+ + + ++I+E G L A DPD+ +NSL YQLSPN +FSL + +G
Sbjct: 132 QFRKDEINLEISESVSLGMGTILESAEDPDISMNSLSKYQLSPNEYFSLVEKDNPDGGKY 191
Query: 192 PELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKV 251
PELVL++ LDRE +AHHLVLTA DGG+P RS T +I + V+D NDN PVF+Q +YRV +
Sbjct: 192 PELVLQKTLDRETQSAHHLVLTALDGGDPPRSGTAQIRILVIDANDNPPVFSQDVYRVSL 251
Query: 252 LENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEE 311
E+VPPGT +L A+D DEGIN ++ Y F+ + +K +F L+ TG I T + LD+EE
Sbjct: 252 REDVPPGTSILRVKATDQDEGINSEITYSFFGVADKAQHVFSLDYTTGNILTQQPLDFEE 311
Query: 312 CSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNA 371
Y + I+A+D G L KV++ V D NDN PE+ ITSL + ED+P G V+ LF
Sbjct: 312 VERYTINIEAKDRGSLSTRCKVIVEVVDENDNSPEIIITSLSDQIMEDSPPGVVVALFKT 371
Query: 372 HDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPP 431
D+DSG+NG+V CS+ + F + +S +YY+L+T + LDRE+ EYN+T+ ATDRG PP
Sbjct: 372 RDQDSGENGEVRCSLSRGVPFKIHSSSNNYYKLVTDEALDREQTPEYNVTIAATDRGKPP 431
Query: 432 LSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSL 491
LS+ ITL +TD+NDN P F Q++Y V++PENN G SI V A DPD N RV YSL
Sbjct: 432 LSSSKTITLHITDVNDNAPVFGQSAYLVHVPENNQPGASIAQVSASDPDFGLNGRVSYSL 491
Query: 492 AEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLF 551
++ LS+YVS+++ +GV++A +FD+EQ R ++ + A D GSP LS+NVSLR+
Sbjct: 492 IASDLESRTLSSYVSVSAQSGVVFAQRAFDHEQLRTFELTLQARDQGSPALSANVSLRVL 551
Query: 552 VLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKA 611
V D+NDNAP +LYPAL DGS + PR+A+PGYLVTKVVAVD DSG NAWLSY + +A
Sbjct: 552 VGDRNDNAPRVLYPALGPDGSALFDTVPRAAQPGYLVTKVVAVDADSGHNAWLSYHVVQA 611
Query: 612 SEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDI 671
SEPGLFS+GL TGEVR RAL D+D+++Q L+VAV+D GQPPLSAT TL + ADS+ ++
Sbjct: 612 SEPGLFSLGLRTGEVRMVRALGDKDSVRQRLLVAVRDGGQPPLSATATLHLVFADSLQEV 671
Query: 672 LADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATSDG 731
L D P+D +A ++ YLVVA+A++S +FL VI +ALRLR S D
Sbjct: 672 LPDFSDHPTPSDSQA-EMQFYLVVALALISVLFLLAVILAIALRLRQSFSP----TAGDC 726
Query: 732 LAGVPTSHF--VGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTL----ISQQSC 785
V S VG Y+ F + D P+ N+ ++ +Q +
Sbjct: 727 FESVLCSKSGPVGPPNYSEGTLPYAYNFCVPGDQMN-----PEFNFFTSVDHCPATQDNL 781
Query: 786 EKNEPLCVSVDSKFPIEDTPLV-PQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFD 844
K+ L S+ + D ++ QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFD
Sbjct: 782 NKDSMLLASILTPSVEADKKILKQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFD 841
Query: 845 TEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATL 904
TEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATL
Sbjct: 842 TEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATL 901
Query: 905 TNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
TNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 902 TNAAGKRDGKAPAGGNGNKKKSGKKEKK 929
>gi|13470082 protocadherin gamma subfamily B, 4 isoform 1 precursor
[Homo sapiens]
Length = 923
Score = 911 bits (2355), Expect = 0.0
Identities = 492/929 (52%), Positives = 630/929 (67%), Gaps = 31/929 (3%)
Query: 14 VLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVSRGRTQ 73
VL LL + A QIRY +PEE KG +VGN++ DL +EL R++R+ S
Sbjct: 16 VLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQELPTRKLRVSSE--KP 73
Query: 74 LFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDINDSAPKF 133
F+++ SG L+ + R+DREE+C + P C + F+ + E+ + Y + +E+ DIND PKF
Sbjct: 74 YFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVNVEIEDINDHTPKF 133
Query: 134 QAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNGAINPE 193
S E++I+E A PG R+ L A D D+G N+LQ+YQLSP+ HFSL + +G+ PE
Sbjct: 134 TQNSFELQISESAQPGTRFILGSAHDADIGSNTLQNYQLSPSDHFSLINKEKSDGSKYPE 193
Query: 194 LVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKVLE 253
+VL+ LDRE+ ++HL LTA D G P SST +IHV V D NDNAPVF+Q +YRV + E
Sbjct: 194 MVLKTPLDREKQKSYHLTLTALDFGAPPLSSTAQIHVLVTDANDNAPVFSQDVYRVSLSE 253
Query: 254 NVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEECS 313
NV PGT +L TA+D DEG+N ++ + F + + Q F LN NTGEI+ +LD+EE
Sbjct: 254 NVYPGTTVLQVTATDQDEGVNAEITFSFSEAS--QITQFDLNSNTGEITVLNTLDFEEVK 311
Query: 314 FYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNAHD 373
Y + ++A DGGG+ V + V D NDN PEV SL + + EDA GT I L D
Sbjct: 312 EYSIVLEARDGGGMIAQCTVEVEVIDENDNAPEVIFQSLPNLIMEDAELGTHIALLKVRD 371
Query: 374 RDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPPLS 433
+DS NG+V C ++ ++ F + S + Y+L+T +LDRE+ EYNITVTATDRG PPLS
Sbjct: 372 KDSRHNGEVTCKLEGDVPFKILTSSRNTYKLVTDAVLDREQNPEYNITVTATDRGKPPLS 431
Query: 434 TEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSLAE 493
+ ITL + D+NDN P FSQ+SY V++ ENN G SI V A DPD N +V Y +
Sbjct: 432 SSSSITLHIGDVNDNAPVFSQSSYIVHVAENNPPGASISQVRASDPDLGPNGQVSYCIMA 491
Query: 494 DTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLFVL 553
++ LS+YVSI++++GV++A +FD+EQ R ++ + A D GSP LS+NVSLR+ V
Sbjct: 492 SDLEQRELSSYVSISAESGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVD 551
Query: 554 DQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKASE 613
D+NDNAP +LYPAL DGS ++ P +AEPGYLVTKVVAVD DSG NAWLSY + +ASE
Sbjct: 552 DRNDNAPRVLYPALGPDGSALFDMVPHAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASE 611
Query: 614 PGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDILA 673
PGLFS+GL TGEVRTARAL DRDA++Q L+VAV+D GQPPLSAT TL + ADS+ ++L
Sbjct: 612 PGLFSLGLRTGEVRTARALGDRDAVRQRLLVAVRDGGQPPLSATATLHLVFADSLQEVLP 671
Query: 674 DLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATSDGL- 732
D+ P+DL+A +L YLVVA+A++S +FL +I +ALRLR S GL
Sbjct: 672 DITDRPDPSDLQA-ELQFYLVVALALISVLFLVAMILAIALRLRRSSSPASWSCFQPGLC 730
Query: 733 ----AGVPTSHFVGVDGVRAFLQTYSQEFSL-TADSRKSHLIFPQPNYADTLISQQSCEK 787
+ VP ++ G T ++L A + K+ F + S+Q
Sbjct: 731 VKSESVVPPNYSEG---------TLPYSYNLCVAHTGKTEFNFLK-------CSEQLSSG 774
Query: 788 NEPLC-VSVDSKFPI---EDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQF 843
+ LC S + FP+ + QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQF
Sbjct: 775 QDILCGDSSGALFPLCNSSELTSHQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQF 834
Query: 844 DTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNAT 903
DTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNAT
Sbjct: 835 DTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNAT 894
Query: 904 LTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
LTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 895 LTNAAGKRDGKAPAGGNGNKKKSGKKEKK 923
>gi|11128037 protocadherin gamma subfamily B, 1 isoform 1 precursor
[Homo sapiens]
Length = 927
Score = 908 bits (2346), Expect = 0.0
Identities = 486/928 (52%), Positives = 627/928 (67%), Gaps = 23/928 (2%)
Query: 14 VLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVSRGRTQ 73
VL LL + A + QIRY++PEE G VG ++KDL L REL R++R+ +
Sbjct: 14 VLFPFLLSLFCGAISQQIRYTIPEELANGSRVGKLAKDLGLSVRELPTRKLRVSAE---D 70
Query: 74 LFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDINDSAPKF 133
F+++ SG L+ GRIDRE++C + C + F+ + E+ + ++ + + + DIND+AP+F
Sbjct: 71 YFNVSLESGDLLVNGRIDREKICGRKLECALEFETVAENPMNVFHVVVVIQDINDNAPRF 130
Query: 134 QAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNGAINPE 193
A+ ++++I E A+PG ++ L A D DV NSL+ Y ++PN +FSL+ + +G+ P
Sbjct: 131 VAKGIDLEICESALPGVKFSLDSAQDADVEGNSLKLYTINPNQYFSLSTKESPDGSKYPV 190
Query: 194 LVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKVLE 253
L+LE+ LDRE ++H L+LTA DGG+P S T I + V D NDNAPVF+Q +YRV + E
Sbjct: 191 LLLEKPLDREHQSSHRLILTAMDGGDPPLSGTTHIWIRVTDANDNAPVFSQEVYRVSLQE 250
Query: 254 NVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEECS 313
NVP GT +L A+D DEGIN ++ Y F SL F LN NTG+I+T +LD+EE S
Sbjct: 251 NVPWGTSVLRVMATDQDEGINAEITYAFLNSPISTSL-FNLNPNTGDITTNGTLDFEETS 309
Query: 314 FYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNAHD 373
Y + ++A+DGG V I + D NDN PEVT S + + ED+ GTVI L D
Sbjct: 310 RYVLSVEAKDGGVHTAHCNVQIEIVDENDNAPEVTFMSFSNQIPEDSDLGTVIALIKVRD 369
Query: 374 RDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPPLS 433
+DSG+NG V C QE + F LE++ ++YY+L+ A L+RE+ ++YN+T+ ATD+G P LS
Sbjct: 370 KDSGQNGMVTCYTQEEVPFKLESTSKNYYKLVIAGALNREQTADYNVTIIATDKGKPALS 429
Query: 434 TEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSLAE 493
+ ITL ++DINDN P F QASY V++ ENN G SI V A DPD N RV YS+
Sbjct: 430 SRTSITLHISDINDNAPVFHQASYVVHVSENNPPGASIAQVSASDPDLGPNGRVSYSILA 489
Query: 494 DTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLFVL 553
++ L +YVS++ +GV++A +FD+EQ R ++ + A D GSP LS+NVSLR+ V
Sbjct: 490 SDLEPRELLSYVSVSPQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVG 549
Query: 554 DQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKASE 613
D NDNAP +LYPAL DGS ++ PR+AEPGYLVTKVVAVD DSG NAWLSY + +ASE
Sbjct: 550 DLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASE 609
Query: 614 PGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDILA 673
PGLFS+GL TGEVRTARAL DRDA +Q L+VAV+D GQPPLSAT TL + ADS+ ++L
Sbjct: 610 PGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVLP 669
Query: 674 DLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATSDGLA 733
DL P+D + ++L YLVVA+A++S +FL VI +ALRLR S GL
Sbjct: 670 DLSDRPEPSDPQ-TELQFYLVVALALISVLFLLAVILAIALRLRRSSSLDTEGCFQTGLC 728
Query: 734 -----GVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLISQQSCEKN 788
GVP +H G T ++L S + F N + Q +
Sbjct: 729 SKSGPGVPPNHSEG---------TLPYSYNLCIASHSAKTEFNSLNLTPEMAPPQDLLCD 779
Query: 789 EP---LCVS-VDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFD 844
+P +C S D K + + QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFD
Sbjct: 780 DPSMVVCASNEDHKIAYDPSLSSHQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFD 839
Query: 845 TEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATL 904
TEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATL
Sbjct: 840 TEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATL 899
Query: 905 TNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
TNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 900 TNAAGKRDGKAPAGGNGNKKKSGKKEKK 927
>gi|11128033 protocadherin gamma subfamily B, 3 isoform 1 precursor
[Homo sapiens]
Length = 929
Score = 906 bits (2342), Expect = 0.0
Identities = 490/934 (52%), Positives = 634/934 (67%), Gaps = 31/934 (3%)
Query: 12 RLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVSRGR 71
R +L LL +L + + IRY++PEE ++G +VGN++KDL +L R +R+++ +
Sbjct: 14 RRMLFLFLLSLLDQVLSEPIRYAIPEELDRGSLVGNLAKDLGFGVGDLPTRNLRVIAEKK 73
Query: 72 TQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDINDSAP 131
F+++P +G L+ + RIDREE+C + C++ F+++ E + + + + + DIND+ P
Sbjct: 74 --FFTVSPENGNLLVSDRIDREEICGKKSTCVLEFEMVAEKPLNFFHVTVLIQDINDNPP 131
Query: 132 KFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNGAIN 191
F E++I+E+A+ GA + L A DPDVGVNSLQ Y LSP+ HFSL + +G+
Sbjct: 132 TFSQNITELEISELALTGATFALESAQDPDVGVNSLQQYYLSPDPHFSLIQKENLDGSRY 191
Query: 192 PELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKV 251
PELVL+ LDREE HHLVLTA DGGEP RS T +I V V D NDN PVF Q +YRV V
Sbjct: 192 PELVLKAPLDREEQPHHHLVLTAVDGGEPSRSCTTQIRVIVADANDNPPVFTQDMYRVNV 251
Query: 252 LENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEE 311
EN+P G+ +L A D+DEGIN ++ Y F I ++ LF+L+ TGE++T LD+EE
Sbjct: 252 AENLPAGSSVLKVMAIDMDEGINAEIIYAFINIGKEVRQLFKLDSKTGELTTIGELDFEE 311
Query: 312 CSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNA 371
Y + ++A+DGG + KV I + D NDN PE+T+ S ++EDA GT + L
Sbjct: 312 RDSYTIGVEAKDGGHHTAYCKVQIDISDENDNAPEITLASESQHIQEDAELGTAVALIKT 371
Query: 372 HDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPP 431
HD DSG NG+++C ++ N F + ++ YRL+T LDRE+ EYN+T+TATD+G PP
Sbjct: 372 HDLDSGFNGEILCQLKGNFPFKIVQDTKNTYRLVTDGALDREQIPEYNVTITATDKGNPP 431
Query: 432 LSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSL 491
LS+ ITL + D+NDN P F QASY+V++ ENN G SI V A DPD N V Y +
Sbjct: 432 LSSSKTITLHILDVNDNVPVFHQASYTVHVAENNPPGASIAHVRASDPDLGPNGLVSYYI 491
Query: 492 AEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLF 551
++ LS+YVS+++ +GV++A +FD+EQ R ++ + A D GSP LS+NVSLR+
Sbjct: 492 VASDLEPRELSSYVSVSARSGVVFAQRAFDHEQLRAFELTLQARDQGSPTLSANVSLRVL 551
Query: 552 VLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKA 611
V D+NDNAP +LYPAL +GS ++ PRSAEPGYLVTKVVAVD DSG NAWLSY + +A
Sbjct: 552 VDDRNDNAPLVLYPALGPEGSALFDMVPRSAEPGYLVTKVVAVDADSGYNAWLSYHIVQA 611
Query: 612 SEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDI 671
SEPGLFS+GL TGEVRTAR L DR+A +Q L+V V+D GQ PLSATV L + ADS+ +I
Sbjct: 612 SEPGLFSLGLRTGEVRTARTLGDREAARQRLLVTVRDGGQQPLSATVMLHLIFADSLQEI 671
Query: 672 LADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATSDG 731
DL P+D +A +L +LVVA+A++S +FL VI ++LRLR SS R ++G
Sbjct: 672 QPDLSDRPTPSDPQA-ELQFHLVVALALISVLFLLAVILAISLRLR--CSS---RPATEG 725
Query: 732 LAGVPTSHFVGVDGVRAFLQTYSQ-----EFSLTADSRKSHLIFPQPNYADTLISQQSCE 786
P F V GV L TYS+ ++ A S S+ F N I ++
Sbjct: 726 YF-QPGVCFKTVPGV---LPTYSERTLPYSYNPCAASHSSNTEFKFLN-----IKAENAA 776
Query: 787 KNEPLCVSVDSKFPIEDTPLVP--------QAPPNTDWRFSQAQRPGTSGSQNGDDTGTW 838
+ LC S F D P +P QAPPNTDWRFSQAQRPGTSGSQNGDDTGTW
Sbjct: 777 PQDLLCDEA-SWFESNDNPEMPSNSGNLQKQAPPNTDWRFSQAQRPGTSGSQNGDDTGTW 835
Query: 839 PNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIP 898
PNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIP
Sbjct: 836 PNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIP 895
Query: 899 GSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
GSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 896 GSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 929
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.132 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,593,770
Number of Sequences: 37866
Number of extensions: 1615323
Number of successful extensions: 10288
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 190
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 3150
Number of HSP's gapped (non-prelim): 657
length of query: 932
length of database: 18,247,518
effective HSP length: 112
effective length of query: 820
effective length of database: 14,006,526
effective search space: 11485351320
effective search space used: 11485351320
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.