Guide to the Human Genome
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Name: CREB3L1 Sequence: fasta or formatted (519aa) NCBI GI: 16418355
Description:

cAMP responsive element binding protein 3-like 1

Referenced in:

CREB / ATF Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         37           5
 C cysteine            1.0          5           1
 D aspartate           6.4         33           2
 E glutamate           7.7         40           3
 F phenylalanine       3.3         17           2
 G glycine             5.2         27           2
 H histidine           2.9         15           1
 I isoleucine          2.5         13           1
 K lysine              5.8         30           3
 L leucine            12.1         63           3
 M methionine          2.7         14           1
 N asparagine          2.9         15           2
 P proline            10.0         52           2
 Q glutamine           4.0         21           2
 R arginine            3.5         18           2
 S serine              9.6         50           2
 T threonine           6.7         35           2
 V valine              4.0         21           1
 W tryptophan          1.2          6           1
 Y tyrosine            1.3          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cAMP responsive element binding protein 3-like 1 [Ho... 
CREB3L2               0.314   cAMP responsive element binding protein 3-like 2 [Ho...
CREB3L3               0.101   cAMP responsive element binding protein 3-like 3 [Ho...
CREB3L4               0.099   cAMP responsive element binding protein 3-like 4 [Ho...
CREB3                 0.088   cAMP responsive element binding protein 3 
ATF1                  0.037   activating transcription factor 1 
CREB1                 0.036   cAMP responsive element binding protein 1 isoform A [...
CREB1                 0.036   cAMP responsive element binding protein 1 isoform B ...
CREM                  0.033   cAMP responsive element modulator isoform s 
CREM                  0.032   cAMP responsive element modulator isoform j 
CREM                  0.032   cAMP responsive element modulator isoform i 
CREM                  0.032   cAMP responsive element modulator isoform h 
CREM                  0.032   cAMP responsive element modulator isoform g 
CREM                  0.032   cAMP responsive element modulator isoform d 
CREM                  0.032   cAMP responsive element modulator isoform r 
CREM                  0.032   cAMP responsive element modulator isoform t 
CREM                  0.032   cAMP responsive element modulator isoform u 
ATF7                  0.032   activating transcription factor 7 isoform 2 
ATF6B                 0.031   activating transcription factor 6 beta isoform b [H...
ATF6B                 0.031   activating transcription factor 6 beta isoform a [Ho...
ATF7                  0.031   activating transcription factor 7 isoform 3 
ATF7                  0.029   activating transcription factor 7 isoform 1 
ATF3                  0.029   activating transcription factor 3 isoform 1 
ATF3                  0.029   activating transcription factor 3 isoform 1 
CREM                  0.029   cAMP responsive element modulator isoform l 
CREM                  0.029   cAMP responsive element modulator isoform k 
CREM                  0.029   cAMP responsive element modulator isoform f 
CREM                  0.029   cAMP responsive element modulator isoform e 
CREM                  0.029   cAMP responsive element modulator isoform q 
CREM                  0.029   cAMP responsive element modulator isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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