Guide to the Human Genome
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Name: GNAO1 Sequence: fasta or formatted (354aa) NCBI GI: 162461738
Description:

guanine nucleotide binding protein, alpha activating polypeptide O isoform b

Referenced in:

G Proteins

Other entries for this name:
alt prot [354aa] guanine nucleotide binding protein, alpha activating polypeptide ...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6         27           2
 C cysteine            2.5          9           1
 D aspartate           7.1         25           1
 E glutamate           7.9         28           2
 F phenylalanine       4.8         17           1
 G glycine             5.4         19           2
 H histidine           2.3          8           1
 I isoleucine          7.3         26           2
 K lysine              8.2         29           2
 L leucine             7.6         27           4
 M methionine          2.3          8           2
 N asparagine          3.7         13           2
 P proline             1.7          6           1
 Q glutamine           3.4         12           1
 R arginine            4.5         16           1
 S serine              6.8         24           1
 T threonine           6.8         24           2
 V valine              5.6         20           2
 W tryptophan          0.8          3           1
 Y tyrosine            3.7         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   guanine nucleotide binding protein, alpha activatin... 
GNAO1                 0.948   guanine nucleotide binding protein, alpha activating...
GNAI1                 0.719   guanine nucleotide binding protein (G protein), alph...
GNAI3                 0.710   guanine nucleotide binding protein (G protein), alpha...
GNAI2                 0.704   guanine nucleotide binding protein (G protein), alpha...
GNAT3                 0.608   guanine nucleotide binding protein, alpha transduci...
GNAT2                 0.592   guanine nucleotide binding protein, alpha transducin...
GNAT1                 0.586   rod-type transducin alpha subunit 
GNAT1                 0.586   rod-type transducin alpha subunit 
GNAZ                  0.570   guanine nucleotide binding protein, alpha z polypepti...
GNA14                 0.484   G alpha 14 
GNAQ                  0.465   guanine nucleotide binding protein (G protein), q po...
GNA11                 0.462   guanine nucleotide binding protein (G protein), alp...
GNA15                 0.372   guanine nucleotide binding protein (G protein), alp...
GNA13                 0.370   guanine nucleotide binding protein (G protein), alph...
GNA12                 0.367   guanine nucleotide binding protein (G protein) alpha...
GNAS                  0.353   GNAS complex locus isoform g 
GNAS                  0.353   GNAS complex locus GNASS 
GNAL                  0.353   guanine nucleotide binding protein (G protein), alpha...
GNAL                  0.353   guanine nucleotide binding protein (G protein), alp...
GNAL                  0.348   guanine nucleotide binding protein (G protein), alph...
GNAS                  0.345   GNAS complex locus XLas 
GNAS                  0.344   GNAS complex locus GNASL 
GNAS                  0.343   GNAS complex locus isoform f 
ARF6                  0.041   ADP-ribosylation factor 6 
TRIM23                0.034   ADP-ribosylation factor domain protein 1 isoform gam...
TRIM23                0.034   ADP-ribosylation factor domain protein 1 isoform bet...
TRIM23                0.034   ADP-ribosylation factor domain protein 1 isoform alph...
ARF1                  0.031   ADP-ribosylation factor 1 
ARF1                  0.031   ADP-ribosylation factor 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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