Guide to the Human Genome
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Name: MYL12B Sequence: fasta or formatted (172aa) NCBI GI: 15809016
Description:

myosin regulatory light chain MRCL2 isoform A

Referenced in:

Myosin

Other entries for this name:
alt mRNA [172aa] myosin regulatory light chain MRCL2 isoform A
alt mRNA [172aa] myosin regulatory light chain MRCL2 isoform A
alt prot [154aa] myosin regulatory light chain MRCL2 isoform B
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6         13           1
 C cysteine            0.6          1           1
 D aspartate          11.0         19           2
 E glutamate           8.7         15           2
 F phenylalanine       7.6         13           1
 G glycine             5.2          9           1
 H histidine           1.2          2           1
 I isoleucine          5.2          9           1
 K lysine              8.7         15           2
 L leucine             6.4         11           2
 M methionine          5.2          9           2
 N asparagine          5.8         10           1
 P proline             3.5          6           1
 Q glutamine           3.5          6           1
 R arginine            4.7          8           1
 S serine              2.9          5           2
 T threonine           8.1         14           2
 V valine              1.7          3           1
 W tryptophan          0.0          0           0
 Y tyrosine            2.3          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myosin regulatory light chain MRCL2 isoform A 
MYL12B                1.000   myosin regulatory light chain MRCL2 isoform A [Homo...
MYL12B                1.000   myosin regulatory light chain MRCL2 isoform A [Homo...
MYL12A                0.966   myosin, light chain 12A, regulatory, non-sarcomeric [...
MYL9                  0.942   myosin regulatory light chain 9 isoform a 
MYL12B                0.880   myosin regulatory light chain MRCL2 isoform B [Homo...
LOC391722             0.859   PREDICTED: similar to myosin regulatory light chain ...
LOC391722             0.859   PREDICTED: similar to myosin regulatory light chain ...
LOC391722             0.850   PREDICTED: similar to myosin regulatory light chain...
MYL2                  0.500   slow cardiac myosin regulatory light chain 2 
MYL5                  0.482   myosin regulatory light chain 5 
MYLPF                 0.479   myosin light chain, phosphorylatable, fast skeletal ...
MYL7                  0.442   myosin light chain 2a 
MYL9                  0.442   myosin regulatory light chain 9 isoform b 
MYL10                 0.423   myosin, light chain 10, regulatory 
CALM3                 0.307   calmodulin 3 
CALM2                 0.307   calmodulin 2 
CALM1                 0.307   calmodulin 1 
CALML3                0.276   calmodulin-like 3 
CETN2                 0.181   caltractin 
CETN1                 0.181   centrin 1 
CALML4                0.178   calmodulin-like 4 isoform 1 
CALML5                0.163   calmodulin-like 5 
TNNC2                 0.150   fast skeletal muscle troponin C 
MYL6B                 0.147   smooth muscle and non-muscle myosin alkali light chai...
MYL6                  0.141   myosin, light chain 6, alkali, smooth muscle and non...
MYL1                  0.135   fast skeletal myosin alkali light chain 1 isoform 3f...
MYL6                  0.135   myosin, light chain 6, alkali, smooth muscle and non...
MYL1                  0.132   fast skeletal myosin alkali light chain 1 isoform 1f...
TNNC1                 0.129   troponin C, slow 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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