Guide to the Human Genome
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Name: TADA2B Sequence: fasta or formatted (420aa) NCBI GI: 156523268
Description:

transcriptional adaptor 2 (ADA2 homolog, yeast)-beta

Referenced in:

Bromodomain Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         25           2
 C cysteine            2.4         10           1
 D aspartate           6.2         26           4
 E glutamate          10.0         42           2
 F phenylalanine       2.9         12           1
 G glycine             6.2         26           2
 H histidine           2.6         11           2
 I isoleucine          5.0         21           3
 K lysine              8.8         37           2
 L leucine            10.2         43           3
 M methionine          2.4         10           1
 N asparagine          3.1         13           1
 P proline             4.5         19           2
 Q glutamine           3.3         14           3
 R arginine            7.9         33           2
 S serine              6.0         25           2
 T threonine           3.6         15           2
 V valine              4.0         17           1
 W tryptophan          1.0          4           1
 Y tyrosine            4.0         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transcriptional adaptor 2 (ADA2 homolog, yeast)-bet... 
TADA2L                0.161   transcriptional adaptor 2-like isoform a 
TADA2L                0.115   transcriptional adaptor 2-like isoform b 
DTNA                  0.020   dystrobrevin alpha isoform 1 
DTNA                  0.020   dystrobrevin alpha isoform 3 
ENAH                  0.018   enabled homolog isoform a 
ENAH                  0.018   enabled homolog isoform b 
LOC100133599          0.018   PREDICTED: hypothetical protein 
EIF5B                 0.018   eukaryotic translation initiation factor 5B 
KIF16B                0.017   kinesin-like motor protein C20orf23 
DTNA                  0.017   dystrobrevin alpha isoform 2 
DTNA                  0.017   dystrobrevin alpha isoform 4 
DTNA                  0.017   dystrobrevin alpha isoform 5 
DTNA                  0.017   dystrobrevin alpha isoform 7 
DTNA                  0.017   dystrobrevin alpha isoform 9 
KIF4A                 0.017   kinesin family member 4 
EIF3A                 0.016   eukaryotic translation initiation factor 3, subunit 1...
LOC100133599          0.016   PREDICTED: hypothetical protein 
TCHH                  0.016   trichohyalin 
DTNB                  0.016   dystrobrevin, beta isoform 1 
DTNB                  0.016   dystrobrevin, beta isoform 3 
DTNB                  0.016   dystrobrevin, beta isoform 2 
DTNB                  0.016   dystrobrevin, beta isoform 5 
DTNB                  0.016   dystrobrevin, beta isoform 4 
TAF3                  0.014   RNA polymerase II transcription factor TAFII140 [Ho...
USP8                  0.014   ubiquitin specific peptidase 8 
USP8                  0.014   ubiquitin specific peptidase 8 
USP8                  0.014   ubiquitin specific peptidase 8 
WDR60                 0.014   WD repeat domain 60 
SMARCC1               0.013   SWI/SNF-related matrix-associated actin-dependent r...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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