Guide to the Human Genome
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Name: HEG1 Sequence: fasta or formatted (1381aa) NCBI GI: 153792110
Description:

HEG homolog 1

Referenced in:

Cardiovascular System

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         92           3
 C cysteine            2.1         29           2
 D aspartate           3.3         45           2
 E glutamate           6.0         83           2
 F phenylalanine       2.8         38           2
 G glycine             5.7         79           3
 H histidine           2.0         28           2
 I isoleucine          3.0         42           1
 K lysine              2.9         40           1
 L leucine             8.6        119           6
 M methionine          1.7         23           1
 N asparagine          3.8         53           2
 P proline             7.5        104           3
 Q glutamine           3.7         51           1
 R arginine            4.9         67           3
 S serine             17.1        236          14
 T threonine          10.4        144           3
 V valine              5.0         69           2
 W tryptophan          0.8         11           1
 Y tyrosine            2.0         28           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   HEG homolog 1 
LOC729792             0.040   PREDICTED: hypothetical protein 
LOC729792             0.040   PREDICTED: hypothetical protein 
LOC729792             0.040   PREDICTED: hypothetical protein 
LOC100294501          0.040   PREDICTED: hypothetical protein 
LOC100294238          0.040   PREDICTED: hypothetical protein 
LOC100294204          0.040   PREDICTED: hypothetical protein 
LOC100294136          0.040   PREDICTED: hypothetical protein 
LOC100294091          0.040   PREDICTED: hypothetical protein 
LOC730401             0.040   PREDICTED: hypothetical protein 
LOC100294249          0.039   PREDICTED: hypothetical protein XP_002344067 
MUC17                 0.036   mucin 17 
MUC12                 0.035   PREDICTED: mucin 12 
MUC12                 0.034   PREDICTED: mucin 12, cell surface associated 
MUC12                 0.034   PREDICTED: mucin 12 
MUC5B                 0.030   mucin 5, subtype B, tracheobronchial 
MUC5AC                0.030   mucin 5AC 
MUC3A                 0.030   PREDICTED: mucin 3A, cell surface associated, parti...
MUC3A                 0.030   PREDICTED: mucin 3A, intestinal 
MUC6                  0.029   mucin 6, gastric 
MUC12                 0.027   PREDICTED: mucin 12 
MUC4                  0.026   mucin 4 isoform a 
MUC2                  0.026   mucin 2 precursor 
MUC3B                 0.026   PREDICTED: mucin 3B, cell surface associated, parti...
LOC732156             0.026   PREDICTED: similar to Mucin-3A 
LOC100134138          0.025   PREDICTED: similar to mucin, partial 
LOC100133408          0.025   PREDICTED: similar to mucin 
MUC16                 0.025   mucin 16 
LOC100131514          0.024   PREDICTED: similar to hCG1747327, partial 
DSPP                  0.024   dentin sialophosphoprotein preproprotein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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