Guide to the Human Genome
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Name: CCL14 Sequence: fasta or formatted (109aa) NCBI GI: 14589959
Description:

chemokine (C-C motif) ligand 14 isoform 2 precursor

Referenced in:

Chemokines and Their Receptors

Other entries for this name:
alt prot [93aa] chemokine (C-C motif) ligand 14 isoform 1 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.8          3           2
 C cysteine            3.7          4           2
 D aspartate           3.7          4           1
 E glutamate           3.7          4           1
 F phenylalanine       3.7          4           2
 G glycine             6.4          7           2
 H histidine           1.8          2           1
 I isoleucine          9.2         10           1
 K lysine             11.0         12           1
 L leucine             4.6          5           2
 M methionine          2.8          3           1
 N asparagine          2.8          3           1
 P proline             6.4          7           1
 Q glutamine           4.6          5           1
 R arginine            2.8          3           1
 S serine              8.3          9           3
 T threonine           9.2         10           2
 V valine              6.4          7           2
 W tryptophan          0.9          1           1
 Y tyrosine            5.5          6           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   chemokine (C-C motif) ligand 14 isoform 2 precursor ... 
CCL14                 0.789   chemokine (C-C motif) ligand 14 isoform 1 precursor ...
CCL3                  0.314   chemokine (C-C motif) ligand 3 
CCL3L1                0.314   chemokine (C-C motif) ligand 3-like 1 precursor [Hom...
CCL3L3                0.314   chemokine (C-C motif) ligand 3-like 3 precursor [Hom...
CCL4L1                0.304   chemokine (C-C motif) ligand 4-like 1 precursor [Hom...
CCL4L2                0.304   chemokine (C-C motif) ligand 4-like 2 precursor [Hom...
CCL4                  0.294   chemokine C-C motif ligand 4 isoform 1 precursor [Hom...
CCL23                 0.284   small inducible cytokine A23 isoform CKbeta8 precurs...
CCL18                 0.279   small inducible cytokine A18 precursor 
CCL15                 0.265   chemokine (C-C motif) ligand 15 precursor 
CCL23                 0.255   small inducible cytokine A23 isoform CKbeta8-1 precu...
CCL5                  0.225   small inducible cytokine A5 precursor 
CCL16                 0.221   small inducible cytokine A16 precursor 
CCL13                 0.211   small inducible cytokine A13 precursor 
CCL8                  0.181   small inducible cytokine A8 precursor 
CCL26                 0.172   chemokine (C-C motif) ligand 26 precursor 
CCL24                 0.172   small inducible cytokine A24 precursor 
CCL7                  0.157   chemokine (C-C motif) ligand 7 precursor 
CCL11                 0.147   small inducible cytokine A11 precursor 
CCL17                 0.147   small inducible cytokine A17 precursor 
CCL22                 0.132   small inducible cytokine A22 precursor 
CCL2                  0.127   small inducible cytokine A2 precursor 
CCL1                  0.123   small inducible cytokine A1 precursor 
XCL1                  0.118   chemokine (C motif) ligand 1 
XCL2                  0.118   chemokine (C motif) ligand 2 
CCL19                 0.074   small inducible cytokine A19 precursor 
CX3CL1                0.074   chemokine (C-X3-C motif) ligand 1 
CCL21                 0.069   small inducible cytokine A21 precursor 
CCL20                 0.059   chemokine (C-C motif) ligand 20 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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