Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: BMP8A Sequence: fasta or formatted (402aa) NCBI GI: 145611428
Description:

bone morphogenetic protein 8A

Referenced in:

TGF-beta Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.2         37           2
 C cysteine            2.7         11           2
 D aspartate           5.7         23           3
 E glutamate           4.5         18           1
 F phenylalanine       3.5         14           2
 G glycine             7.5         30           4
 H histidine           3.2         13           1
 I isoleucine          2.2          9           1
 K lysine              2.7         11           2
 L leucine            12.2         49           2
 M methionine          2.2          9           1
 N asparagine          2.7         11           2
 P proline             8.2         33           3
 Q glutamine           4.5         18           2
 R arginine            9.7         39           3
 S serine              5.7         23           2
 T threonine           3.0         12           1
 V valine              6.7         27           2
 W tryptophan          1.5          6           1
 Y tyrosine            2.2          9           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   bone morphogenetic protein 8A 
BMP8B                 0.983   bone morphogenetic protein 8B preproprotein 
BMP5                  0.463   bone morphogenetic protein 5 preproprotein 
BMP7                  0.458   bone morphogenetic protein 7 precursor 
BMP6                  0.440   bone morphogenetic protein 6 preproprotein 
BMP4                  0.185   bone morphogenetic protein 4 preproprotein 
BMP4                  0.185   bone morphogenetic protein 4 preproprotein 
BMP4                  0.185   bone morphogenetic protein 4 preproprotein 
BMP2                  0.180   bone morphogenetic protein 2 preproprotein 
GDF5                  0.140   growth differentiation factor 5 preproprotein 
GDF7                  0.140   growth differentiation factor 7 preproprotein 
GDF6                  0.139   growth differentiation factor 6 precursor 
BMP10                 0.125   bone morphogenetic protein 10 preproprotein 
GDF3                  0.124   growth differentiation factor 3 precursor 
GDF2                  0.120   growth differentiation factor 2 
GDF1                  0.114   growth differentiation factor 1 
BMP3                  0.109   bone morphogenetic protein 3 preproprotein 
GDF10                 0.104   growth differentiation factor 10 precursor 
NODAL                 0.098   nodal precursor 
INHBA                 0.097   inhibin beta A precursor 
BMP15                 0.083   bone morphogenetic protein 15 precursor 
TGFB2                 0.077   transforming growth factor, beta 2 isoform 1 
TGFB2                 0.077   transforming growth factor, beta 2 isoform 2 
MSTN                  0.077   myostatin 
INHBB                 0.077   inhibin beta B subunit preproprotein 
INHBE                 0.077   activin beta E 
INHBC                 0.073   inhibin beta C chain preproprotein 
TGFB3                 0.072   transforming growth factor, beta 3 
GDF11                 0.065   growth differentiation factor 11 precursor 
GDF9                  0.061   growth differentiation factor 9 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press