Guide to the Human Genome
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Name: TMEM65 Sequence: fasta or formatted (240aa) NCBI GI: 145580604
Description:

transmembrane protein 65

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.8         26           5
 C cysteine            2.1          5           3
 D aspartate           2.5          6           1
 E glutamate           5.4         13           2
 F phenylalanine       3.8          9           2
 G glycine            11.2         27           3
 H histidine           2.5          6           1
 I isoleucine          7.1         17           2
 K lysine              3.3          8           2
 L leucine            13.8         33           2
 M methionine          2.9          7           1
 N asparagine          1.7          4           1
 P proline             8.3         20           3
 Q glutamine           2.1          5           1
 R arginine            6.2         15           2
 S serine              6.2         15           1
 T threonine           5.0         12           1
 V valine              2.9          7           1
 W tryptophan          0.8          2           1
 Y tyrosine            1.2          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane protein 65 
NNT                   0.026   nicotinamide nucleotide transhydrogenase 
NNT                   0.026   nicotinamide nucleotide transhydrogenase 
C14orf4               0.020   chromosome 14 open reading frame 4 
WBP11                 0.020   WW domain binding protein 11 
APLP2                 0.017   amyloid beta (A4) precursor-like protein 2 isoform ...
APLP2                 0.017   amyloid beta (A4) precursor-like protein 2 isoform ...
APLP2                 0.017   amyloid beta (A4) precursor-like protein 2 isoform ...
APLP2                 0.017   amyloid beta (A4) precursor-like protein 2 isoform 1 ...
ZDHHC18               0.015   zinc finger, DHHC-type containing 18 
PRRT3                 0.015   proline-rich transmembrane protein 3 
GPR172A               0.013   G protein-coupled receptor 172A 
BACH2                 0.013   BTB and CNC homology 1, basic leucine zipper transcr...
FBRS                  0.013   fibrosin 
LOC100292623          0.011   PREDICTED: hypothetical protein 
LOC100290254          0.011   PREDICTED: hypothetical protein XP_002347960 
LOC100288017          0.011   PREDICTED: hypothetical protein XP_002343778 
LOC100292037          0.011   PREDICTED: hypothetical protein XP_002344729 
LOC100290821          0.011   PREDICTED: hypothetical protein XP_002347416 
LOC100287334          0.011   PREDICTED: hypothetical protein XP_002343201 
KIAA1543              0.011   NEZHA isoform 2 
KIAA1543              0.011   NEZHA isoform 1 
COG7                  0.011   component of oligomeric golgi complex 7 
LOC284988             0.011   PREDICTED: hypothetical protein 
WDR73                 0.011   WD repeat domain 73 
MAP4K2                0.009   mitogen-activated protein kinase kinase kinase kinas...
TTC9B                 0.009   tetratricopeptide repeat domain 9B 
LOC339742             0.009   PREDICTED: hypothetical protein 
LOC100291317          0.009   PREDICTED: hypothetical protein XP_002346735 
LBXCOR1               0.009   LBXCOR1 homolog 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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