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Search of human proteins with 9256604
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|9256604 protocadherin beta 11 precursor [Homo sapiens]
(797 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|9256604 protocadherin beta 11 precursor [Homo sapiens] 1560 0.0
gi|9256606 protocadherin beta 12 precursor [Homo sapiens] 1385 0.0
gi|9256608 protocadherin beta 14 precursor [Homo sapiens] 1213 0.0
gi|9256614 protocadherin beta 3 precursor [Homo sapiens] 1179 0.0
gi|9256612 protocadherin beta 2 precursor [Homo sapiens] 1172 0.0
gi|14195605 protocadherin beta 16 precursor [Homo sapiens] 1163 0.0
gi|7661662 protocadherin beta 5 precursor [Homo sapiens] 1160 0.0
gi|11276081 protocadherin beta 8 precursor [Homo sapiens] 1158 0.0
gi|9256616 protocadherin beta 4 precursor [Homo sapiens] 1157 0.0
gi|9256610 protocadherin beta 15 precursor [Homo sapiens] 1150 0.0
gi|11036654 protocadherin beta 13 precursor [Homo sapiens] 1142 0.0
gi|14195616 protocadherin beta 9 precursor [Homo sapiens] 1137 0.0
gi|11036656 protocadherin beta 7 precursor [Homo sapiens] 1136 0.0
gi|9256602 protocadherin beta 10 precursor [Homo sapiens] 1134 0.0
gi|9256618 protocadherin beta 6 precursor [Homo sapiens] 1117 0.0
gi|14195607 protocadherin beta 1 precursor [Homo sapiens] 767 0.0
gi|14196471 protocadherin gamma subfamily A, 5 isoform 2 precurs... 637 0.0
gi|11056024 protocadherin gamma subfamily A, 5 isoform 1 precurs... 637 0.0
gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precurs... 635 0.0
gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precurs... 635 0.0
gi|14196451 protocadherin gamma subfamily A, 11 isoform 2 precur... 635 0.0
gi|11128039 protocadherin gamma subfamily A, 11 isoform 1 precur... 635 0.0
gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precur... 634 0.0
gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precur... 634 0.0
gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precurs... 632 0.0
gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precurs... 632 0.0
gi|14196468 protocadherin gamma subfamily A, 4 isoform 2 precurs... 631 0.0
gi|11056026 protocadherin gamma subfamily A, 4 isoform 1 precurs... 631 0.0
gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precurs... 622 e-178
gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precurs... 622 e-178
>gi|9256604 protocadherin beta 11 precursor [Homo sapiens]
Length = 797
Score = 1560 bits (4040), Expect = 0.0
Identities = 797/797 (100%), Positives = 797/797 (100%)
Query: 1 MENQGTRTQQIRQVLLLFVLLGMSQAGSETWSFSVAEEMQSGSFVGNLAKDLGLKVRELS 60
MENQGTRTQQIRQVLLLFVLLGMSQAGSETWSFSVAEEMQSGSFVGNLAKDLGLKVRELS
Sbjct: 1 MENQGTRTQQIRQVLLLFVLLGMSQAGSETWSFSVAEEMQSGSFVGNLAKDLGLKVRELS 60
Query: 61 SRGARVVSNDKKQRLQLDINTGDLLLSETLDREELCGSIEPCVLHLQVLMQNPTQFLQIE 120
SRGARVVSNDKKQRLQLDINTGDLLLSETLDREELCGSIEPCVLHLQVLMQNPTQFLQIE
Sbjct: 61 SRGARVVSNDKKQRLQLDINTGDLLLSETLDREELCGSIEPCVLHLQVLMQNPTQFLQIE 120
Query: 121 LQVRDINDHSPIFSEKQMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTISPNSHFHI 180
LQVRDINDHSPIFSEKQMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTISPNSHFHI
Sbjct: 121 LQVRDINDHSPIFSEKQMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTISPNSHFHI 180
Query: 181 KMRVIPDNRKYPELVLDKALDYEELPELSFILSALDGGSPPRSGTALVRVVVVDINDNSP 240
KMRVIPDNRKYPELVLDKALDYEELPELSFILSALDGGSPPRSGTALVRVVVVDINDNSP
Sbjct: 181 KMRVIPDNRKYPELVLDKALDYEELPELSFILSALDGGSPPRSGTALVRVVVVDINDNSP 240
Query: 241 EFEQAFYEVKIRENSILGSLILIVSAWDLDSGTNGEICYTFSHASEDIRKTFEINQKSGE 300
EFEQAFYEVKIRENSILGSLILIVSAWDLDSGTNGEICYTFSHASEDIRKTFEINQKSGE
Sbjct: 241 EFEQAFYEVKIRENSILGSLILIVSAWDLDSGTNGEICYTFSHASEDIRKTFEINQKSGE 300
Query: 301 ITLRAPLDFETIESYSIIIQATDGGGLFGKSTVIIHVIDVNDNAPEITVSSITSPIPENT 360
ITLRAPLDFETIESYSIIIQATDGGGLFGKSTVIIHVIDVNDNAPEITVSSITSPIPENT
Sbjct: 301 ITLRAPLDFETIESYSIIIQATDGGGLFGKSTVIIHVIDVNDNAPEITVSSITSPIPENT 360
Query: 361 PETVVMVFSIQDIDSGDNGRIVCSIPEDLPFVLKSSVENYYTLETERPLDRESTAEYNIT 420
PETVVMVFSIQDIDSGDNGRIVCSIPEDLPFVLKSSVENYYTLETERPLDRESTAEYNIT
Sbjct: 361 PETVVMVFSIQDIDSGDNGRIVCSIPEDLPFVLKSSVENYYTLETERPLDRESTAEYNIT 420
Query: 421 ITVTDLGIPRLKTEHNTTVLVSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
ITVTDLGIPRLKTEHNTTVLVSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS
Sbjct: 421 ITVTDLGIPRLKTEHNTTVLVSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
Query: 481 GTNAQVNYSLLPPQDLHLPLASLVSINTDNGHLFALRSLDYEALQAFDFRVGATDRGSPA 540
GTNAQVNYSLLPPQDLHLPLASLVSINTDNGHLFALRSLDYEALQAFDFRVGATDRGSPA
Sbjct: 481 GTNAQVNYSLLPPQDLHLPLASLVSINTDNGHLFALRSLDYEALQAFDFRVGATDRGSPA 540
Query: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA
Sbjct: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
Query: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLQV 660
WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLQV
Sbjct: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLQV 660
Query: 661 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720
LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA
Sbjct: 661 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720
Query: 721 SVGSCSVPKGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSETNEFKFLKPVIPNIQAKGLG 780
SVGSCSVPKGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSETNEFKFLKPVIPNIQAKGLG
Sbjct: 721 SVGSCSVPKGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSETNEFKFLKPVIPNIQAKGLG 780
Query: 781 KNSEENSTFRNSFGFNF 797
KNSEENSTFRNSFGFNF
Sbjct: 781 KNSEENSTFRNSFGFNF 797
>gi|9256606 protocadherin beta 12 precursor [Homo sapiens]
Length = 795
Score = 1385 bits (3585), Expect = 0.0
Identities = 706/795 (88%), Positives = 736/795 (92%)
Query: 1 MENQGTRTQQIRQVLLLFVLLGMSQAGSETWSFSVAEEMQSGSFVGNLAKDLGLKVRELS 60
MEN G T QIRQVLL FVLLGMSQAGSET +F V EE+QSGSFVGNLAK LGL+V ELS
Sbjct: 1 MENGGAGTLQIRQVLLFFVLLGMSQAGSETGNFLVMEELQSGSFVGNLAKTLGLEVSELS 60
Query: 61 SRGARVVSNDKKQRLQLDINTGDLLLSETLDREELCGSIEPCVLHLQVLMQNPTQFLQIE 120
SRGARVVSND K+ LQLD NTGDLLL E LDREELCGS EPCVL+ QVLM+NPTQFLQIE
Sbjct: 61 SRGARVVSNDNKECLQLDTNTGDLLLREMLDREELCGSNEPCVLYFQVLMKNPTQFLQIE 120
Query: 121 LQVRDINDHSPIFSEKQMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTISPNSHFHI 180
LQVRDINDHSP+F EK+MLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTI+PNSHFH+
Sbjct: 121 LQVRDINDHSPVFLEKEMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTINPNSHFHV 180
Query: 181 KMRVIPDNRKYPELVLDKALDYEELPELSFILSALDGGSPPRSGTALVRVVVVDINDNSP 240
K+RV PDNRKYPELVLDKALDYEE PELSFIL+ALDGGSPPRSGTALVRVVVVDINDNSP
Sbjct: 181 KIRVNPDNRKYPELVLDKALDYEERPELSFILTALDGGSPPRSGTALVRVVVVDINDNSP 240
Query: 241 EFEQAFYEVKIRENSILGSLILIVSAWDLDSGTNGEICYTFSHASEDIRKTFEINQKSGE 300
EFEQAFYEVKI ENSILGSL++ VSAWDLDSGTN E+ YTFSHASEDIRKTFEINQKSG+
Sbjct: 241 EFEQAFYEVKILENSILGSLVVTVSAWDLDSGTNSELSYTFSHASEDIRKTFEINQKSGD 300
Query: 301 ITLRAPLDFETIESYSIIIQATDGGGLFGKSTVIIHVIDVNDNAPEITVSSITSPIPENT 360
ITL APLDFE IESYSIIIQATDGGGLFGKSTV I V+DVNDNAPEITVSSITSPIPENT
Sbjct: 301 ITLTAPLDFEAIESYSIIIQATDGGGLFGKSTVRIQVMDVNDNAPEITVSSITSPIPENT 360
Query: 361 PETVVMVFSIQDIDSGDNGRIVCSIPEDLPFVLKSSVENYYTLETERPLDRESTAEYNIT 420
PETVVMVF I+D DSGDNG++VCSIPED+PFVLKSSV NYYTLETERPLDRES AEYNIT
Sbjct: 361 PETVVMVFRIRDRDSGDNGKMVCSIPEDIPFVLKSSVNNYYTLETERPLDRESRAEYNIT 420
Query: 421 ITVTDLGIPRLKTEHNTTVLVSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
ITVTDLG PRLKTEHN TVLVSDVNDNAP FTQTSY LFVRENNSPALHIGS+SATDRDS
Sbjct: 421 ITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYALFVRENNSPALHIGSISATDRDS 480
Query: 481 GTNAQVNYSLLPPQDLHLPLASLVSINTDNGHLFALRSLDYEALQAFDFRVGATDRGSPA 540
GTNAQVNYSLLP QD HLPLASLVSIN DNGHLFALRSLDYEALQ F FRVGATD GSPA
Sbjct: 481 GTNAQVNYSLLPSQDPHLPLASLVSINADNGHLFALRSLDYEALQGFQFRVGATDHGSPA 540
Query: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVP AAEPGYLVTKVVAVDGDSGQNA
Sbjct: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPWAAEPGYLVTKVVAVDGDSGQNA 600
Query: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLQV 660
WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATL V
Sbjct: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 660
Query: 661 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720
LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA
Sbjct: 661 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720
Query: 721 SVGSCSVPKGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSETNEFKFLKPVIPNIQAKGLG 780
VG CSVP+GPFPGHLVDVSGTGTLSQSY YEVC+TGGS +N+FKFLKP+IPN + G
Sbjct: 721 PVGRCSVPEGPFPGHLVDVSGTGTLSQSYHYEVCVTGGSRSNKFKFLKPIIPNFLPQSTG 780
Query: 781 KNSEENSTFRNSFGF 795
EEN F+N+ GF
Sbjct: 781 SEVEENPPFQNNLGF 795
>gi|9256608 protocadherin beta 14 precursor [Homo sapiens]
Length = 798
Score = 1213 bits (3138), Expect = 0.0
Identities = 613/796 (77%), Positives = 693/796 (87%)
Query: 1 MENQGTRTQQIRQVLLLFVLLGMSQAGSETWSFSVAEEMQSGSFVGNLAKDLGLKVRELS 60
ME +G + RQVL+ VLLG+S+AG+E+ +SVAEE + GSFV NLA+DLGL V ELS
Sbjct: 1 MEIRGALDLRKRQVLIFLVLLGLSRAGTESAHYSVAEETEIGSFVANLARDLGLGVEELS 60
Query: 61 SRGARVVSNDKKQRLQLDINTGDLLLSETLDREELCGSIEPCVLHLQVLMQNPTQFLQIE 120
SR ARVVS+D K+ L LD+ TG+LLL+E LDR+ELCGS EPCVLH QV+++NP QF + E
Sbjct: 61 SREARVVSDDNKKYLHLDLLTGNLLLNEKLDRDELCGSTEPCVLHFQVVLENPLQFFRFE 120
Query: 121 LQVRDINDHSPIFSEKQMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTISPNSHFHI 180
L V+DINDHSP F +K++L++I E + VGA FL+ESA+DLDVG N++++YTISPNSHF+I
Sbjct: 121 LCVKDINDHSPTFLDKEILIKISEGTTVGATFLMESAQDLDVGSNSLQNYTISPNSHFYI 180
Query: 181 KMRVIPDNRKYPELVLDKALDYEELPELSFILSALDGGSPPRSGTALVRVVVVDINDNSP 240
K+ D + YPELVLD+ALDYE+ EL L+A+DGGSPP+SGT LV + V+DINDN+P
Sbjct: 181 KIPDSSDRKIYPELVLDRALDYEQEAELRLTLTAVDGGSPPKSGTTLVLIKVLDINDNAP 240
Query: 241 EFEQAFYEVKIRENSILGSLILIVSAWDLDSGTNGEICYTFSHASEDIRKTFEINQKSGE 300
EF Q+ YEV++ E+ LGS I +SA DLD+G G+I YTF HASEDIRKTFEIN SGE
Sbjct: 241 EFPQSLYEVQVPEDRPLGSWIATISAKDLDAGNYGKISYTFFHASEDIRKTFEINPISGE 300
Query: 301 ITLRAPLDFETIESYSIIIQATDGGGLFGKSTVIIHVIDVNDNAPEITVSSITSPIPENT 360
+ LR+PLDFE I+SY+I IQATDGGGL GK T+++ V+D+NDN PE+T+SSIT IPEN
Sbjct: 301 VNLRSPLDFEVIQSYTINIQATDGGGLSGKCTLLVKVMDINDNPPEVTISSITKRIPENA 360
Query: 361 PETVVMVFSIQDIDSGDNGRIVCSIPEDLPFVLKSSVENYYTLETERPLDRESTAEYNIT 420
ET+V +FSI D DSGDNGR++CSI ++LPF LK + +N++TL +E+ LDRES AEYNIT
Sbjct: 361 SETLVALFSILDQDSGDNGRMICSIQDNLPFFLKPTFKNFFTLVSEKALDRESQAEYNIT 420
Query: 421 ITVTDLGIPRLKTEHNTTVLVSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
ITVTDLG PRLKTE+N TVL+SDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS
Sbjct: 421 ITVTDLGTPRLKTEYNITVLLSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
Query: 481 GTNAQVNYSLLPPQDLHLPLASLVSINTDNGHLFALRSLDYEALQAFDFRVGATDRGSPA 540
GTNAQVNYSLLPPQD HLPLASLVSIN DNGHLFALRSLDYEALQ F+FRVGATDRGSPA
Sbjct: 481 GTNAQVNYSLLPPQDRHLPLASLVSINADNGHLFALRSLDYEALQEFEFRVGATDRGSPA 540
Query: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA
Sbjct: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
Query: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLQV 660
WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATL V
Sbjct: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 660
Query: 661 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720
LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA
Sbjct: 661 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720
Query: 721 SVGSCSVPKGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSETNEFKFLKPVIPNIQAKGLG 780
SVG CSVP+GPFPGHLVDVSGTGTLSQSYQYEVCLTGGS TNEFKFLKP+IPN Q G
Sbjct: 721 SVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNFQVHDTG 780
Query: 781 KNSEENSTFRNSFGFN 796
+N E FRNSFG N
Sbjct: 781 RNMGEIENFRNSFGLN 796
>gi|9256614 protocadherin beta 3 precursor [Homo sapiens]
Length = 796
Score = 1179 bits (3050), Expect = 0.0
Identities = 599/796 (75%), Positives = 678/796 (85%)
Query: 1 MENQGTRTQQIRQVLLLFVLLGMSQAGSETWSFSVAEEMQSGSFVGNLAKDLGLKVRELS 60
ME G R + RQVLLLFV LG S AGSE+ +SVAEE + G + NLAKDLGL+V EL+
Sbjct: 1 MEAGGERFLRQRQVLLLFVFLGGSLAGSESRRYSVAEEKEKGFLIANLAKDLGLRVEELA 60
Query: 61 SRGARVVSNDKKQRLQLDINTGDLLLSETLDREELCGSIEPCVLHLQVLMQNPTQFLQIE 120
+RGA+VVS KQ QL TGDLLL+E LDREELCG EPC+LH Q+L+QNP QF+ E
Sbjct: 61 ARGAQVVSKGNKQHFQLSHQTGDLLLNEKLDREELCGPTEPCILHFQILLQNPLQFVTNE 120
Query: 121 LQVRDINDHSPIFSEKQMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTISPNSHFHI 180
L++ D+NDHSP+F E +M L+I E++ G V L +A+DLDVG N++++YTI+PNSHFH+
Sbjct: 121 LRIIDVNDHSPVFFENEMHLKILESTLPGTVIPLGNAEDLDVGRNSLQNYTITPNSHFHV 180
Query: 181 KMRVIPDNRKYPELVLDKALDYEELPELSFILSALDGGSPPRSGTALVRVVVVDINDNSP 240
R D RKYPELVLDKALD EE PELS L+ALDGGSPPRSGTA + + V+DINDN+P
Sbjct: 181 LTRSRRDGRKYPELVLDKALDREEQPELSLTLTALDGGSPPRSGTAQINIQVLDINDNAP 240
Query: 241 EFEQAFYEVKIRENSILGSLILIVSAWDLDSGTNGEICYTFSHASEDIRKTFEINQKSGE 300
EF Q YEV + EN+ + S+I+ VSA DLD+G+ G I Y F HASE+IRKTF++N +G+
Sbjct: 241 EFAQPLYEVAVLENTPVNSVIVTVSASDLDTGSFGTISYAFFHASEEIRKTFQLNPITGD 300
Query: 301 ITLRAPLDFETIESYSIIIQATDGGGLFGKSTVIIHVIDVNDNAPEITVSSITSPIPENT 360
+ L L+FE I SY + I+A DGGGL GKSTVI+ V+DVNDN PE+T+SS+ SPIPEN+
Sbjct: 301 MQLVKYLNFEAINSYEVDIEAKDGGGLSGKSTVIVQVVDVNDNPPELTLSSVNSPIPENS 360
Query: 361 PETVVMVFSIQDIDSGDNGRIVCSIPEDLPFVLKSSVENYYTLETERPLDRESTAEYNIT 420
ETV+ VFS+ D+DSGDNGR++CSI +LPF LK SVEN+YTL +E LDRE+ +EYNIT
Sbjct: 361 GETVLAVFSVSDLDSGDNGRVMCSIENNLPFFLKPSVENFYTLVSEGALDRETRSEYNIT 420
Query: 421 ITVTDLGIPRLKTEHNTTVLVSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
IT+TDLG PRLKT++N TVLVSDVNDNAP FTQ SYTLFVRENNSPALHIGSVSATDRDS
Sbjct: 421 ITITDLGTPRLKTKYNITVLVSDVNDNAPAFTQISYTLFVRENNSPALHIGSVSATDRDS 480
Query: 481 GTNAQVNYSLLPPQDLHLPLASLVSINTDNGHLFALRSLDYEALQAFDFRVGATDRGSPA 540
GTNAQV YSLLPPQD HLPL+SLVSIN DNGHLFALRSLDYEALQAF+FRVGATDRGSPA
Sbjct: 481 GTNAQVTYSLLPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPA 540
Query: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA
Sbjct: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
Query: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLQV 660
WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATL V
Sbjct: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 660
Query: 661 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720
LLVDGFSQPYLPLPEAAPAQAQAD LTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA
Sbjct: 661 LLVDGFSQPYLPLPEAAPAQAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720
Query: 721 SVGSCSVPKGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSETNEFKFLKPVIPNIQAKGLG 780
SVG CSVP+GPFPG +VDVSGTGTLSQSYQYEVCLTGGS TNEFKFLKP+IPN A+G
Sbjct: 721 SVGRCSVPEGPFPGQMVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNFVAQGAE 780
Query: 781 KNSEENSTFRNSFGFN 796
+ SE N +FR SF F+
Sbjct: 781 RVSEANPSFRKSFEFS 796
>gi|9256612 protocadherin beta 2 precursor [Homo sapiens]
Length = 798
Score = 1172 bits (3032), Expect = 0.0
Identities = 595/789 (75%), Positives = 670/789 (84%)
Query: 7 RTQQIRQVLLLFVLLGMSQAGSETWSFSVAEEMQSGSFVGNLAKDLGLKVRELSSRGARV 66
R + RQVL+ FVLLG++QA + +SVAEE +SGSFV NL KDLGL++ EL+ RGARV
Sbjct: 9 RVPKQRQVLIFFVLLGIAQASCQPRHYSVAEETESGSFVANLLKDLGLEIGELAVRGARV 68
Query: 67 VSNDKKQRLQLDINTGDLLLSETLDREELCGSIEPCVLHLQVLMQNPTQFLQIELQVRDI 126
VS KK LQ D TGDLLL+E LDREELCG EPCVL QVL++NP QF Q EL++RD+
Sbjct: 69 VSKGKKMHLQFDRQTGDLLLNEKLDREELCGPTEPCVLPFQVLLENPLQFFQAELRIRDV 128
Query: 127 NDHSPIFSEKQMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTISPNSHFHIKMRVIP 186
NDHSP+F +K++LL+IPE+ G FL+E A+DLDVG N++++YTISPN HFH+ ++
Sbjct: 129 NDHSPVFLDKEILLKIPESITPGTTFLIERAQDLDVGTNSLQNYTISPNFHFHLNLQDSL 188
Query: 187 DNRKYPELVLDKALDYEELPELSFILSALDGGSPPRSGTALVRVVVVDINDNSPEFEQAF 246
D P+LVL++ALD EE PE+ L+ALDGGSPPRSGTALVR+ VVDINDN PEF +
Sbjct: 189 DGIILPQLVLNRALDREEQPEIRLTLTALDGGSPPRSGTALVRIEVVDINDNVPEFAKLL 248
Query: 247 YEVKIRENSILGSLILIVSAWDLDSGTNGEICYTFSHASEDIRKTFEINQKSGEITLRAP 306
YEV+I E+S +GS + IVSA DLD GTNGEI Y FS ASEDIRKTF ++ KSGE+ LR
Sbjct: 249 YEVQIPEDSPVGSQVAIVSARDLDIGTNGEISYAFSQASEDIRKTFRLSAKSGELLLRQK 308
Query: 307 LDFETIESYSIIIQATDGGGLFGKSTVIIHVIDVNDNAPEITVSSITSPIPENTPETVVM 366
LDFE+I++Y++ IQATDGGGL G V + V+D+NDN PE+T+S++ + IPEN +T++
Sbjct: 309 LDFESIQTYTVNIQATDGGGLSGTCVVFVQVMDLNDNPPELTMSTLINQIPENLQDTLIA 368
Query: 367 VFSIQDIDSGDNGRIVCSIPEDLPFVLKSSVENYYTLETERPLDRESTAEYNITITVTDL 426
VFS+ D DSGDNGR+VCSI +DLPF LK SVEN+YTL LDRE+ +EYNITITVTD
Sbjct: 369 VFSVSDPDSGDNGRMVCSIQDDLPFFLKPSVENFYTLVISTALDRETRSEYNITITVTDF 428
Query: 427 GIPRLKTEHNTTVLVSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQV 486
G PRLKTEHN TVLVSDVNDNAP FTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQV
Sbjct: 429 GTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQV 488
Query: 487 NYSLLPPQDLHLPLASLVSINTDNGHLFALRSLDYEALQAFDFRVGATDRGSPALSSEAL 546
YSLLPPQD HLPLASLVSIN DNGHLFAL+SLDYEALQAF+FRVGA DRGSPALSSEAL
Sbjct: 489 TYSLLPPQDPHLPLASLVSINADNGHLFALQSLDYEALQAFEFRVGAADRGSPALSSEAL 548
Query: 547 VRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQL 606
VRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQL
Sbjct: 549 VRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQL 608
Query: 607 LKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLQVLLVDGF 666
LKATEPGLFGVWAHNGEVRTARLL ERDAAK RLVVLVKDNGEPPRSATATL VLLVDGF
Sbjct: 609 LKATEPGLFGVWAHNGEVRTARLLRERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGF 668
Query: 667 SQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGSCS 726
SQPYL LPEAAPAQAQAD LTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVG CS
Sbjct: 669 SQPYLLLPEAAPAQAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCS 728
Query: 727 VPKGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSETNEFKFLKPVIPNIQAKGLGKNSEEN 786
VP+GPFPG +VDVSGTGTLSQSYQYEVCLTGGS TNEFKFLKP+IPN A+G + SE N
Sbjct: 729 VPEGPFPGQMVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNFVAQGAERVSEAN 788
Query: 787 STFRNSFGF 795
+FR SF F
Sbjct: 789 PSFRKSFEF 797
>gi|14195605 protocadherin beta 16 precursor [Homo sapiens]
Length = 776
Score = 1163 bits (3008), Expect = 0.0
Identities = 586/773 (75%), Positives = 659/773 (85%)
Query: 1 MENQGTRTQQIRQVLLLFVLLGMSQAGSETWSFSVAEEMQSGSFVGNLAKDLGLKVRELS 60
ME ++ RQVL+ FVLL +S AG+E S+SV EE + GSFV NL KDLGL + E+S
Sbjct: 1 MEIGWMHNRRQRQVLVFFVLLSLSGAGAELGSYSVVEETERGSFVANLGKDLGLGLTEMS 60
Query: 61 SRGARVVSNDKKQRLQLDINTGDLLLSETLDREELCGSIEPCVLHLQVLMQNPTQFLQIE 120
+R AR++S KQ LQL TGDLL++E LDREELCG EPC+LH QVLM+NP + Q E
Sbjct: 61 TRKARIISQGNKQHLQLKAQTGDLLINEKLDREELCGPTEPCILHFQVLMENPLEIFQAE 120
Query: 121 LQVRDINDHSPIFSEKQMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTISPNSHFHI 180
L+V DINDHSP+F+EK+M+L+IPENSP+G F L A DLDVG N V++Y ISP+SHF +
Sbjct: 121 LRVIDINDHSPMFTEKEMILKIPENSPLGTEFPLNHALDLDVGSNNVQNYKISPSSHFRV 180
Query: 181 KMRVIPDNRKYPELVLDKALDYEELPELSFILSALDGGSPPRSGTALVRVVVVDINDNSP 240
+ D RKYPELVLDK LD EE P+L L+ALDGGSPPRSGTA VR+ VVDINDN+P
Sbjct: 181 LIHEFRDGRKYPELVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNAP 240
Query: 241 EFEQAFYEVKIRENSILGSLILIVSAWDLDSGTNGEICYTFSHASEDIRKTFEINQKSGE 300
EFEQ Y+V+I ENS LGSL+ VSA DLD G NG+I YT SEDI KT E+N +GE
Sbjct: 241 EFEQPIYKVQIPENSPLGSLVATVSARDLDGGANGKISYTLFQPSEDISKTLEVNPMTGE 300
Query: 301 ITLRAPLDFETIESYSIIIQATDGGGLFGKSTVIIHVIDVNDNAPEITVSSITSPIPENT 360
+ LR +DFE + SY + I+ATDGGGL GK T+++ V+DVNDN P++T+S++TSPIPEN+
Sbjct: 301 VRLRKQVDFEMVTSYEVRIKATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENS 360
Query: 361 PETVVMVFSIQDIDSGDNGRIVCSIPEDLPFVLKSSVENYYTLETERPLDRESTAEYNIT 420
PE VV VFS+ D DSG+NG+ + SI EDLPF+LK SV+N+YTL TER LDRE+ AEYNIT
Sbjct: 361 PEIVVAVFSVSDPDSGNNGKTISSIQEDLPFLLKPSVKNFYTLVTERALDREARAEYNIT 420
Query: 421 ITVTDLGIPRLKTEHNTTVLVSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
+TVTD+G PRLKTEHN TV +SDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS
Sbjct: 421 LTVTDMGTPRLKTEHNITVQISDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
Query: 481 GTNAQVNYSLLPPQDLHLPLASLVSINTDNGHLFALRSLDYEALQAFDFRVGATDRGSPA 540
GTNAQV YSLLPPQD HLPLASLVSIN DNGHLFALRSLDYEAL+ F+FRV ATDRGSPA
Sbjct: 481 GTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALREFEFRVSATDRGSPA 540
Query: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA
Sbjct: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
Query: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLQV 660
WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAK RLVVLVKDNGEPPRSATATL V
Sbjct: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHV 660
Query: 661 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720
LLVDGFSQP+LPLPEAAP Q QA+SLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA
Sbjct: 661 LLVDGFSQPFLPLPEAAPGQTQANSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720
Query: 721 SVGSCSVPKGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSETNEFKFLKPVIPN 773
SVG CS+P+GPFPG LVDVSGTGTLSQSYQYEVCLTGGSET+EFKFLKP+IPN
Sbjct: 721 SVGRCSMPEGPFPGRLVDVSGTGTLSQSYQYEVCLTGGSETSEFKFLKPIIPN 773
>gi|7661662 protocadherin beta 5 precursor [Homo sapiens]
Length = 795
Score = 1160 bits (3002), Expect = 0.0
Identities = 588/796 (73%), Positives = 668/796 (83%), Gaps = 1/796 (0%)
Query: 1 MENQGTRTQQIRQVLLLFVLLGMSQAGSETWSFSVAEEMQSGSFVGNLAKDLGLKVRELS 60
ME +T Q RQV+ L +LL + +AGSE +S+ EE +SG V NLAKDLGL V EL+
Sbjct: 1 METALAKTPQKRQVMFLAILLLLWEAGSEAVRYSIPEETESGYSVANLAKDLGLGVGELA 60
Query: 61 SRGARVVSNDKKQRLQLDINTGDLLLSETLDREELCGSIEPCVLHLQVLMQNPTQFLQIE 120
+RGAR+ K+ LQLDI TG+LLL E LDRE +CG+ EPC+LH Q+L++NP QF Q +
Sbjct: 61 TRGARMHYKGNKELLQLDIKTGNLLLYEKLDREVMCGATEPCILHFQLLLENPVQFFQTD 120
Query: 121 LQVRDINDHSPIFSEKQMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTISPNSHFHI 180
LQ+ DINDH+P F EK+MLL+IPE++ G VF L+ A+D D+G N V++YTISPNSHFH+
Sbjct: 121 LQLTDINDHAPEFPEKEMLLKIPESTQPGTVFPLKIAQDFDIGSNTVQNYTISPNSHFHV 180
Query: 181 KMRVIPDNRKYPELVLDKALDYEELPELSFILSALDGGSPPRSGTALVRVVVVDINDNSP 240
D RKYPELVLDKALD EE PELS L+ALDGG+PPRSGT +R+VV+D NDN+P
Sbjct: 181 ATHNRGDGRKYPELVLDKALDREERPELSLTLTALDGGAPPRSGTTTIRIVVLDNNDNAP 240
Query: 241 EFEQAFYEVKIRENSILGSLILIVSAWDLDSGTNGEICYTFSHASEDIRKTFEINQKSGE 300
EF Q+FYEV++ ENS L SL+++VSA DLD+G G + Y E + + F I++K+ E
Sbjct: 241 EFLQSFYEVQVPENSPLNSLVVVVSARDLDAGAYGSVAYALFQGDE-VTQPFVIDEKTAE 299
Query: 301 ITLRAPLDFETIESYSIIIQATDGGGLFGKSTVIIHVIDVNDNAPEITVSSITSPIPENT 360
I L+ LDFE Y++ I ATDGGGL GK TV I V+DVNDNAPE+T+S+++SP PEN
Sbjct: 300 IRLKRALDFEATPYYNVEIVATDGGGLSGKCTVAIEVVDVNDNAPELTMSTLSSPTPENA 359
Query: 361 PETVVMVFSIQDIDSGDNGRIVCSIPEDLPFVLKSSVENYYTLETERPLDRESTAEYNIT 420
PETVV VFS+ D DSGDNGR++CSI DLPF+LK +++N+YTL T+R LDRES AEYNIT
Sbjct: 360 PETVVAVFSVSDPDSGDNGRMICSIQNDLPFLLKPTLKNFYTLVTQRTLDRESQAEYNIT 419
Query: 421 ITVTDLGIPRLKTEHNTTVLVSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
ITVTD+G PRLKTEHN TVLVSDVNDNAP FTQTSYTLFVRENNSPALHIGSVSATDRDS
Sbjct: 420 ITVTDMGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS 479
Query: 481 GTNAQVNYSLLPPQDLHLPLASLVSINTDNGHLFALRSLDYEALQAFDFRVGATDRGSPA 540
GTNAQV YSLLPPQ+ HL LASLVSIN DNGHLFALRSLDYEALQAF+FRVGATDRGSPA
Sbjct: 480 GTNAQVTYSLLPPQNPHLRLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPA 539
Query: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA
Sbjct: 540 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 599
Query: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLQV 660
WLSYQLLKATEPGLF +WAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATL V
Sbjct: 600 WLSYQLLKATEPGLFSMWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 659
Query: 661 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720
LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA
Sbjct: 660 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 719
Query: 721 SVGSCSVPKGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSETNEFKFLKPVIPNIQAKGLG 780
SVG CSVP+GPFPGHLVDVSGTGTLSQSY YEVCLTG S EFKFLKP+IPN+ +G G
Sbjct: 720 SVGRCSVPEGPFPGHLVDVSGTGTLSQSYHYEVCLTGDSGAGEFKFLKPIIPNLLPQGAG 779
Query: 781 KNSEENSTFRNSFGFN 796
+ + + FRNSFG N
Sbjct: 780 EEIGKTAAFRNSFGLN 795
>gi|11276081 protocadherin beta 8 precursor [Homo sapiens]
Length = 801
Score = 1158 bits (2995), Expect = 0.0
Identities = 592/797 (74%), Positives = 667/797 (83%), Gaps = 1/797 (0%)
Query: 1 MENQGTRTQQIRQVLLLFVLLGMSQAGS-ETWSFSVAEEMQSGSFVGNLAKDLGLKVREL 59
ME G + RQVL F+LLG+S AG+ E S+SV EE + SFV NLAKDLGL+ RE
Sbjct: 1 MEASGKLICRQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREF 60
Query: 60 SSRGARVVSNDKKQRLQLDINTGDLLLSETLDREELCGSIEPCVLHLQVLMQNPTQFLQI 119
S RG RVVS K LQL+ T DLLL+E LDRE+LCG EPCVL QVL+++P +F Q
Sbjct: 61 SRRGVRVVSRGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQA 120
Query: 120 ELQVRDINDHSPIFSEKQMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTISPNSHFH 179
ELQV DINDHSP+F +KQML+++ E+SP G F L++A+DLD+G N +++Y ISPNS+F
Sbjct: 121 ELQVIDINDHSPVFLDKQMLVKVSESSPPGTAFPLKNAEDLDIGQNNIENYIISPNSYFR 180
Query: 180 IKMRVIPDNRKYPELVLDKALDYEELPELSFILSALDGGSPPRSGTALVRVVVVDINDNS 239
+ R D RKYPELVLD ALD EE EL L+ALDGGSPPRSGTA V + VVD+NDN+
Sbjct: 181 VLTRKRSDGRKYPELVLDNALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNA 240
Query: 240 PEFEQAFYEVKIRENSILGSLILIVSAWDLDSGTNGEICYTFSHASEDIRKTFEINQKSG 299
PEF+Q FY V+I E+S + L++ VSA D+D+G NGEI Y+ AS++I KTF+++ +G
Sbjct: 241 PEFQQPFYRVQISEDSPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTG 300
Query: 300 EITLRAPLDFETIESYSIIIQATDGGGLFGKSTVIIHVIDVNDNAPEITVSSITSPIPEN 359
EI L+ LDFE +SY + I+A D GG GK TV+I VIDVND+APE+T+S+ TSPIPEN
Sbjct: 301 EIRLKKQLDFEKFQSYEVNIEARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPEN 360
Query: 360 TPETVVMVFSIQDIDSGDNGRIVCSIPEDLPFVLKSSVENYYTLETERPLDRESTAEYNI 419
PETVV +FS+ D+DSG+NG+I CSI EDLPF+LKSSV N+YTL TE PLDRES AEYN+
Sbjct: 361 APETVVALFSVSDLDSGENGKISCSIQEDLPFLLKSSVGNFYTLLTETPLDRESRAEYNV 420
Query: 420 TITVTDLGIPRLKTEHNTTVLVSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRD 479
TITVTDLG PRL T N TVLVSDVNDNAP FTQTSYTLFVRENNSPALHIGSVSATDRD
Sbjct: 421 TITVTDLGTPRLTTHLNMTVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRD 480
Query: 480 SGTNAQVNYSLLPPQDLHLPLASLVSINTDNGHLFALRSLDYEALQAFDFRVGATDRGSP 539
SGTNAQV YSLLPPQD HLPLASLVSINTDNGHLFALRSLDYEALQAF+FRVGA+DRGSP
Sbjct: 481 SGTNAQVTYSLLPPQDPHLPLASLVSINTDNGHLFALRSLDYEALQAFEFRVGASDRGSP 540
Query: 540 ALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN 599
ALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN
Sbjct: 541 ALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN 600
Query: 600 AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLQ 659
AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAK RLVVLVKDNGEPP SATATL
Sbjct: 601 AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPCSATATLH 660
Query: 660 VLLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRA 719
+LLVDGFSQPYLPLPEAAPAQ QADSLTVYLVVALASVSSLFLFSVLLFVAV LCRRSRA
Sbjct: 661 LLLVDGFSQPYLPLPEAAPAQGQADSLTVYLVVALASVSSLFLFSVLLFVAVLLCRRSRA 720
Query: 720 ASVGSCSVPKGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSETNEFKFLKPVIPNIQAKGL 779
ASVG CSVP+GPFPGHLVDV GTG+LSQ+YQYEVCL GGS TNEF+FLKPV+PNIQ
Sbjct: 721 ASVGRCSVPEGPFPGHLVDVRGTGSLSQNYQYEVCLAGGSGTNEFQFLKPVLPNIQGHSF 780
Query: 780 GKNSEENSTFRNSFGFN 796
G E+NS FRN FGF+
Sbjct: 781 GPEMEQNSNFRNGFGFS 797
>gi|9256616 protocadherin beta 4 precursor [Homo sapiens]
Length = 795
Score = 1157 bits (2992), Expect = 0.0
Identities = 586/785 (74%), Positives = 664/785 (84%)
Query: 12 RQVLLLFVLLGMSQAGSETWSFSVAEEMQSGSFVGNLAKDLGLKVRELSSRGARVVSNDK 71
RQVL +++ +SQ E +SV EE +SGSFV +LAKDLGL + EL+SR ARV+S+D
Sbjct: 11 RQVLAFILMVFLSQVRLEPIRYSVLEETESGSFVAHLAKDLGLGIGELASRSARVLSDDD 70
Query: 72 KQRLQLDINTGDLLLSETLDREELCGSIEPCVLHLQVLMQNPTQFLQIELQVRDINDHSP 131
KQRLQLD TGDLLL E LDREELCG IEPCVLH QV ++ P QF Q EL ++DINDHSP
Sbjct: 71 KQRLQLDRQTGDLLLREKLDREELCGPIEPCVLHFQVFLEMPVQFFQGELLIQDINDHSP 130
Query: 132 IFSEKQMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTISPNSHFHIKMRVIPDNRKY 191
IF E+++LL+I ENS G +F L A+DLDVG N ++ YTISPNSHFHI R + +KY
Sbjct: 131 IFPEREVLLKILENSQPGTLFPLLIAEDLDVGSNGLQKYTISPNSHFHILTRNHSEGKKY 190
Query: 192 PELVLDKALDYEELPELSFILSALDGGSPPRSGTALVRVVVVDINDNSPEFEQAFYEVKI 251
P+LV DK LD EE PE S L ALDGGSPPRSGT +VR++++DINDN+PEF Y V++
Sbjct: 191 PDLVQDKPLDREEQPEFSLTLVALDGGSPPRSGTVMVRILIMDINDNAPEFVHTPYGVQV 250
Query: 252 RENSILGSLILIVSAWDLDSGTNGEICYTFSHASEDIRKTFEINQKSGEITLRAPLDFET 311
ENS L S I+ V A D+D+G G + Y AS++I++TF IN+ +GEI L+ LDFE
Sbjct: 251 LENSPLDSPIVRVLARDIDAGNFGSVSYGLFQASDEIKQTFSINEVTGEILLKKKLDFEK 310
Query: 312 IESYSIIIQATDGGGLFGKSTVIIHVIDVNDNAPEITVSSITSPIPENTPETVVMVFSIQ 371
I+SY + I+ATDGGGL GK TV+I V+DVNDN PE+ +SS+TS IPEN PETVV +F I+
Sbjct: 311 IKSYHVEIEATDGGGLSGKGTVVIEVVDVNDNPPELIISSLTSSIPENAPETVVSIFRIR 370
Query: 372 DIDSGDNGRIVCSIPEDLPFVLKSSVENYYTLETERPLDRESTAEYNITITVTDLGIPRL 431
D DSG+NG+++CSIP++LPF+LK +++N+YTL TERPLDRE++AEYNITI VTDLG PRL
Sbjct: 371 DRDSGENGKMICSIPDNLPFILKPTLKNFYTLVTERPLDRETSAEYNITIAVTDLGTPRL 430
Query: 432 KTEHNTTVLVSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVNYSLL 491
KT+ N TV VSDVNDNAP FTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQV YSLL
Sbjct: 431 KTQQNITVQVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLL 490
Query: 492 PPQDLHLPLASLVSINTDNGHLFALRSLDYEALQAFDFRVGATDRGSPALSSEALVRVLV 551
PPQD HLPLASLVSIN DNGHLFALRSLDYEALQAF+FRVGA+DRGSPALSSEALVRVLV
Sbjct: 491 PPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGASDRGSPALSSEALVRVLV 550
Query: 552 LDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATE 611
LD NDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATE
Sbjct: 551 LDTNDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATE 610
Query: 612 PGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLQVLLVDGFSQPYL 671
PGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATL VLLVDGFSQPYL
Sbjct: 611 PGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPYL 670
Query: 672 PLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGSCSVPKGP 731
PLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVG CSVP+GP
Sbjct: 671 PLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCSVPEGP 730
Query: 732 FPGHLVDVSGTGTLSQSYQYEVCLTGGSETNEFKFLKPVIPNIQAKGLGKNSEENSTFRN 791
FPGHLVDVSGTGTLSQSYQYEVCLTG S T EFKFLKP+ PN+ + G+ +EN FRN
Sbjct: 731 FPGHLVDVSGTGTLSQSYQYEVCLTGDSGTGEFKFLKPIFPNLLVQDTGREVKENPKFRN 790
Query: 792 SFGFN 796
S F+
Sbjct: 791 SLVFS 795
>gi|9256610 protocadherin beta 15 precursor [Homo sapiens]
Length = 787
Score = 1150 bits (2975), Expect = 0.0
Identities = 582/784 (74%), Positives = 664/784 (84%)
Query: 1 MENQGTRTQQIRQVLLLFVLLGMSQAGSETWSFSVAEEMQSGSFVGNLAKDLGLKVRELS 60
ME G R + RQVL+L +LL ++ AG E +SV EE + GSFV NLA DLGL V EL+
Sbjct: 1 MEPAGERFPEQRQVLILLLLLEVTLAGWEPRRYSVMEETERGSFVANLANDLGLGVGELA 60
Query: 61 SRGARVVSNDKKQRLQLDINTGDLLLSETLDREELCGSIEPCVLHLQVLMQNPTQFLQIE 120
RGARVVS D +Q LQLD+ TG L+L+E LDRE+LCG EPC++H QVL++ P + + E
Sbjct: 61 ERGARVVSEDNEQGLQLDLQTGQLILNEKLDREKLCGPTEPCIMHFQVLLKKPLEVFRAE 120
Query: 121 LQVRDINDHSPIFSEKQMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTISPNSHFHI 180
L V DINDHSP F E++M L+IPE S +G VF L+ A+DLDVG N V++Y ISPNSHFH+
Sbjct: 121 LLVTDINDHSPEFPEREMTLKIPETSSLGTVFPLKKARDLDVGSNNVQNYNISPNSHFHV 180
Query: 181 KMRVIPDNRKYPELVLDKALDYEELPELSFILSALDGGSPPRSGTALVRVVVVDINDNSP 240
R D RKYPELVLD LD EE EL L+A+DGGSPPRSGT + ++V+D NDN+P
Sbjct: 181 STRTRGDGRKYPELVLDTELDREEQAELRLTLTAVDGGSPPRSGTVQILILVLDANDNAP 240
Query: 241 EFEQAFYEVKIRENSILGSLILIVSAWDLDSGTNGEICYTFSHASEDIRKTFEINQKSGE 300
EF QA YEV++ ENS +GSL++ VSA DLD+GTNGEI Y+ ++S++I K FE++ SGE
Sbjct: 241 EFVQALYEVQVPENSPVGSLVVKVSARDLDTGTNGEISYSLYYSSQEIDKPFELSSLSGE 300
Query: 301 ITLRAPLDFETIESYSIIIQATDGGGLFGKSTVIIHVIDVNDNAPEITVSSITSPIPENT 360
I L LDFET+ SY + I+A+DGGGL GK +V + V+DVNDN PE+++SS+TSPIPEN+
Sbjct: 301 IRLIKKLDFETMSSYDLDIEASDGGGLSGKCSVSVKVLDVNDNFPELSISSLTSPIPENS 360
Query: 361 PETVVMVFSIQDIDSGDNGRIVCSIPEDLPFVLKSSVENYYTLETERPLDRESTAEYNIT 420
PET V +F I+D DSG+NG+++CSI +D+PF LK SVEN+Y L TE LDRE+ AEYNIT
Sbjct: 361 PETEVALFRIRDRDSGENGKMICSIQDDVPFKLKPSVENFYRLVTEGALDRETRAEYNIT 420
Query: 421 ITVTDLGIPRLKTEHNTTVLVSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
IT+TDLG PRLKTE + TVLVSDVNDNAP FTQTSYTLFVRENNSPALHIGSVSATDRDS
Sbjct: 421 ITITDLGTPRLKTEQSITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
Query: 481 GTNAQVNYSLLPPQDLHLPLASLVSINTDNGHLFALRSLDYEALQAFDFRVGATDRGSPA 540
GTNAQV YSLLPP+D HLPL SLVSINTDNGHLFAL+SLDYEALQAF+FRVGATDRG PA
Sbjct: 481 GTNAQVTYSLLPPRDPHLPLTSLVSINTDNGHLFALQSLDYEALQAFEFRVGATDRGFPA 540
Query: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA
Sbjct: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
Query: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLQV 660
WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERD AKHRLVVLVKDNGEPPRSATATLQV
Sbjct: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDVAKHRLVVLVKDNGEPPRSATATLQV 660
Query: 661 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720
LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSV LFVAVRLCRRSRAA
Sbjct: 661 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVFLFVAVRLCRRSRAA 720
Query: 721 SVGSCSVPKGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSETNEFKFLKPVIPNIQAKGLG 780
SVG CSVP+GPFPGHLVDVSGTGTLSQSYQYEVCLTGGSE+N+FKFLKP+ PNI ++
Sbjct: 721 SVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSESNDFKFLKPIFPNIVSQDSR 780
Query: 781 KNSE 784
+ SE
Sbjct: 781 RKSE 784
>gi|11036654 protocadherin beta 13 precursor [Homo sapiens]
Length = 798
Score = 1142 bits (2955), Expect = 0.0
Identities = 590/797 (74%), Positives = 663/797 (83%), Gaps = 2/797 (0%)
Query: 1 MENQGTRTQQIRQVLLLFVLLGMSQAGS-ETWSFSVAEEMQSGSFVGNLAKDLGLKVREL 59
ME G + RQVL F+LLG+S AG+ E S+SV EE + SFV NLAKDLGL+ RE
Sbjct: 1 MEASGKLICRQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREF 60
Query: 60 SSRGARVVSNDKKQRLQLDINTGDLLLSETLDREELCGSIEPCVLHLQVLMQNPTQFLQI 119
S RG RVVS K LQL+ T DLLL+E LDRE+LCG EPCVL QVL+++P +F Q
Sbjct: 61 SRRGVRVVSRGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQA 120
Query: 120 ELQVRDINDHSPIFSEKQMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTISPNSHFH 179
ELQV DINDHSP+F +KQML+++ E+SP G F L++A+DLDVG N +++Y ISPNS+F
Sbjct: 121 ELQVIDINDHSPVFLDKQMLVKVSESSPPGTTFPLKNAEDLDVGQNNIENYIISPNSYFR 180
Query: 180 IKMRVIPDNRKYPELVLDKALDYEELPELSFILSALDGGSPPRSGTALVRVVVVDINDNS 239
+ R D RKYPELVLDKALD EE EL L+ALDGGSPPRSGTA V + V+D+NDN+
Sbjct: 181 VLTRKRSDGRKYPELVLDKALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNA 240
Query: 240 PEFEQAFYEVKIRENSILGSLILIVSAWDLDSGTNGEICYTFSHASEDIRKTFEINQKSG 299
PEFEQ FY V+I E+S +G L++ VSA D+D+G NGEI Y+ ASE+I KTF+IN +G
Sbjct: 241 PEFEQPFYRVQISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTG 300
Query: 300 EITLRAPLDFETIESYSIIIQATDGGGLFGKSTVIIHVIDVNDNAPEITVSSITSPIPEN 359
EI L+ LDFE ++SY + I+A D G GK TV+I VIDVND+APE+T+S+ TSPIPEN
Sbjct: 301 EIELKKQLDFEKLQSYEVNIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPEN 360
Query: 360 TPETVVMVFSIQDIDSGDNGRIVCSIPEDLPFVLKSSVENYYTLETERPLDRESTAEYNI 419
PETVV +FS+ D+DSG+NG+I CSI EDLPF+LKS+ EN+YTL TERPLDRES AEYNI
Sbjct: 361 APETVVALFSVSDLDSGENGKISCSIQEDLPFLLKSA-ENFYTLLTERPLDRESRAEYNI 419
Query: 420 TITVTDLGIPRLKTEHNTTVLVSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRD 479
TITVTDLG P L T+ N TVL++DVNDNAP FTQTSYTLFVRENNSPALHI SVSATDRD
Sbjct: 420 TITVTDLGTPMLITQLNMTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIRSVSATDRD 479
Query: 480 SGTNAQVNYSLLPPQDLHLPLASLVSINTDNGHLFALRSLDYEALQAFDFRVGATDRGSP 539
SGTNAQV YSLLPPQD HLPL SLVSIN DNGHLFALRSLDYEALQ F FRVGA+D GSP
Sbjct: 480 SGTNAQVTYSLLPPQDPHLPLTSLVSINADNGHLFALRSLDYEALQGFQFRVGASDHGSP 539
Query: 540 ALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN 599
ALSSEALVRV+VLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN
Sbjct: 540 ALSSEALVRVVVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN 599
Query: 600 AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLQ 659
AWLSYQLLKATE GLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATL
Sbjct: 600 AWLSYQLLKATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLH 659
Query: 660 VLLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRA 719
VLLVDGFSQPYLPLPEAAP QAQAD LTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRA
Sbjct: 660 VLLVDGFSQPYLPLPEAAPTQAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRA 719
Query: 720 ASVGSCSVPKGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSETNEFKFLKPVIPNIQAKGL 779
ASVG C VP+GP PGHLVD+SGT TLSQSYQYEVCL GGS TNEFKFLKP+IPN +
Sbjct: 720 ASVGRCLVPEGPLPGHLVDMSGTRTLSQSYQYEVCLAGGSGTNEFKFLKPIIPNFPPQCP 779
Query: 780 GKNSEENSTFRNSFGFN 796
GK + NSTF N+FGFN
Sbjct: 780 GKEIQGNSTFPNNFGFN 796
>gi|14195616 protocadherin beta 9 precursor [Homo sapiens]
Length = 797
Score = 1137 bits (2941), Expect = 0.0
Identities = 584/797 (73%), Positives = 660/797 (82%)
Query: 1 MENQGTRTQQIRQVLLLFVLLGMSQAGSETWSFSVAEEMQSGSFVGNLAKDLGLKVRELS 60
M+ +G + RQVL LF+ G+S AGS +SV EE + GSFV NLAKDLGL EL+
Sbjct: 1 MKTRGFSFPRQRQVLFLFLFWGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELA 60
Query: 61 SRGARVVSNDKKQRLQLDINTGDLLLSETLDREELCGSIEPCVLHLQVLMQNPTQFLQIE 120
+RG RVVS+D KQ L LD +TG+LL +E LDRE+LCG EPC+L+ Q+LM +P Q + E
Sbjct: 61 ARGTRVVSDDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAE 120
Query: 121 LQVRDINDHSPIFSEKQMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTISPNSHFHI 180
L+VRDINDHSP+F K+M+L+I EN+ G F LE A+D D G N++++YTIS NS FHI
Sbjct: 121 LRVRDINDHSPVFRHKEMVLKISENTAEGTAFRLERAQDPDEGHNSIQNYTISSNSFFHI 180
Query: 181 KMRVIPDNRKYPELVLDKALDYEELPELSFILSALDGGSPPRSGTALVRVVVVDINDNSP 240
K+ + YPELVLDKALD EE ELS L+ALDGGSP RSGT+ +R+VV+D+NDN+P
Sbjct: 181 KISGSDEGMIYPELVLDKALDREEQEELSLTLTALDGGSPSRSGTSTIRIVVLDVNDNAP 240
Query: 241 EFEQAFYEVKIRENSILGSLILIVSAWDLDSGTNGEICYTFSHASEDIRKTFEINQKSGE 300
+F QA YE + ENS +GSLI+ VSA D DSG N E+ Y+F ASEDI TF+IN SGE
Sbjct: 241 QFAQALYETQAPENSPVGSLIVKVSAGDADSGVNAEVSYSFFDASEDILTTFQINPFSGE 300
Query: 301 ITLRAPLDFETIESYSIIIQATDGGGLFGKSTVIIHVIDVNDNAPEITVSSITSPIPENT 360
I LR LD+E + SY I IQA DGGGL + TV+I V+D NDN PE+ +SS+++ + EN+
Sbjct: 301 IFLRELLDYELVNSYKINIQAMDGGGLSARCTVLIKVLDSNDNPPELIISSLSNSVAENS 360
Query: 361 PETVVMVFSIQDIDSGDNGRIVCSIPEDLPFVLKSSVENYYTLETERPLDRESTAEYNIT 420
P V+ VF I+D DSG+NG+ +C + ++LPF LK SV+N+Y L TE LDRES AEYNIT
Sbjct: 361 PGIVLAVFKIKDRDSGENGKTICYVQDNLPFFLKPSVDNFYILMTEGALDRESKAEYNIT 420
Query: 421 ITVTDLGIPRLKTEHNTTVLVSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
ITVTDLG PRLKTEH+ T+ VSDVNDNAP FTQTSYTLFVRENNSPALHIGSVSATDRDS
Sbjct: 421 ITVTDLGTPRLKTEHSITLQVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
Query: 481 GTNAQVNYSLLPPQDLHLPLASLVSINTDNGHLFALRSLDYEALQAFDFRVGATDRGSPA 540
GTNAQV YSLLPPQD HLPLASLVSIN DNGHLFALRSLDYEALQAFDFRVGA+DRGSPA
Sbjct: 481 GTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFDFRVGASDRGSPA 540
Query: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA
Sbjct: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
Query: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLQV 660
WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATL V
Sbjct: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 660
Query: 661 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720
LLVDGFSQPYLPLPEAAPAQAQAD LTVYLVVALASVSSLFL SVLLFVAVRLCRRSRAA
Sbjct: 661 LLVDGFSQPYLPLPEAAPAQAQADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAA 720
Query: 721 SVGSCSVPKGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSETNEFKFLKPVIPNIQAKGLG 780
SVG CSVP+GPFPGHLVDVSGTGTL QSYQYEVCLTGGSET EFKFLKP+ P++ G
Sbjct: 721 SVGRCSVPEGPFPGHLVDVSGTGTLFQSYQYEVCLTGGSETGEFKFLKPITPHLPPHRGG 780
Query: 781 KNSEENSTFRNSFGFNF 797
K EENST NSFGFN+
Sbjct: 781 KEIEENSTLPNSFGFNY 797
>gi|11036656 protocadherin beta 7 precursor [Homo sapiens]
Length = 793
Score = 1136 bits (2938), Expect = 0.0
Identities = 580/795 (72%), Positives = 668/795 (84%), Gaps = 2/795 (0%)
Query: 1 MENQGTRTQQIRQVLLLFVLLGMSQAGSETWSFSVAEEMQSGSFVGNLAKDLGLKVRELS 60
ME + R Q RQVL L V LGMS AG+E + VAEE + G+F+ NLAKDLGL V EL
Sbjct: 1 MEARVERAVQKRQVLFLCVFLGMSWAGAEPLRYFVAEETERGTFLTNLAKDLGLGVGELR 60
Query: 61 SRGARVVSNDKKQRLQLDINTGDLLLSETLDREELCGSIEPCVLHLQVLMQNPTQFLQIE 120
+RG R+VS+ Q L L TGDLLL+E LDREELCG EPCVL Q+L++ P Q + E
Sbjct: 61 ARGTRIVSDQNMQILLLSSLTGDLLLNEKLDREELCGPREPCVLPFQLLLEKPFQIFRAE 120
Query: 121 LQVRDINDHSPIFSEKQMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTISPNSHFHI 180
L VRDINDH+P+F ++++ L+I E++ GA FLLESA+D DVG N++ +YTISPN++FHI
Sbjct: 121 LWVRDINDHAPVFLDREISLKILESTTPGAAFLLESAQDSDVGTNSLSNYTISPNAYFHI 180
Query: 181 KMRVIPDNRKYPELVLDKALDYEELPELSFILSALDGGSPPRSGTALVRVVVVDINDNSP 240
+ + YPELVL++ LD EE+PE S L+ALDGGSPPRSGTALVR++V+D+NDN+P
Sbjct: 181 NVHDSGEGNIYPELVLNQVLDREEIPEFSLTLTALDGGSPPRSGTALVRILVLDVNDNAP 240
Query: 241 EFEQAFYEVKIRENSILGSLILIVSAWDLDSGTNGEICYTFSHASEDIRKTFEINQKSGE 300
+F ++ Y+V++ ENS +GS+++ VSA DLD+G+NGEI Y FS+A+E I KTF+IN SG
Sbjct: 241 DFVRSLYKVQVPENSPVGSMVVSVSARDLDTGSNGEIAYAFSYATERILKTFQINPTSGS 300
Query: 301 ITLRAPLDFETIESYSIIIQATDGGGLFGKSTVIIHVIDVNDNAPEITVSSITSPIPENT 360
+ L+A LD+E I++Y++ IQA DGGGL GK TV++ V D+NDN PE+ +SS+TSPI EN+
Sbjct: 301 LHLKAQLDYEAIQTYTLTIQAKDGGGLSGKCTVVVDVTDINDNRPELLLSSLTSPIAENS 360
Query: 361 PETVVMVFSIQDIDSGDNGRIVCSIPEDLPFVLKSSVENYYTLETERPLDRESTAEYNIT 420
PETVV VF I+D DSG+NG+ VCSI +D+PF+LK SVEN+YTL TE+PLDRE EYNIT
Sbjct: 361 PETVVAVFRIRDRDSGNNGKTVCSIQDDVPFILKPSVENFYTLVTEKPLDRERNTEYNIT 420
Query: 421 ITVTDLGIPRLKTEHNTTVLVSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
ITVTDLG PRLKTEHN TVLVSDVNDNAP FTQTSYTLFVRENNSPAL IGSVSATDRDS
Sbjct: 421 ITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALPIGSVSATDRDS 480
Query: 481 GTNAQVNYSLLPPQDLHLPLASLVSINTDNGHLFALRSLDYEALQAFDFRVGATDRGSPA 540
GTNAQV YSLLP QD HLPLASLVSIN DNGHLFALRSLDYEALQAF+FRVGATDRGSPA
Sbjct: 481 GTNAQVIYSLLPSQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPA 540
Query: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
LSSEALVRVLVLDANDNSPFVLYPLQN SAPCTE +PRAAEPGYLVTKVVAVDGDSGQNA
Sbjct: 541 LSSEALVRVLVLDANDNSPFVLYPLQNSSAPCTEPLPRAAEPGYLVTKVVAVDGDSGQNA 600
Query: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLQV 660
WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAK RLVVLVKDNGEPPRSATATL V
Sbjct: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHV 660
Query: 661 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720
LLVDGFSQPYL LPEAAP QA+SLTVYLVVALASVSSLFL SVLLFVAVRLCRRSRAA
Sbjct: 661 LLVDGFSQPYLRLPEAAP--DQANSLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAA 718
Query: 721 SVGSCSVPKGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSETNEFKFLKPVIPNIQAKGLG 780
VG CSVP+GPFP HLVD+SGTGTLSQSYQYEVCLTGGS TNEFKFLKP+IPN+ + G
Sbjct: 719 PVGRCSVPEGPFPRHLVDLSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNLLPQSTG 778
Query: 781 KNSEENSTFRNSFGF 795
+ EEN F+N+ GF
Sbjct: 779 REVEENRPFQNNLGF 793
>gi|9256602 protocadherin beta 10 precursor [Homo sapiens]
Length = 800
Score = 1134 bits (2932), Expect = 0.0
Identities = 585/787 (74%), Positives = 656/787 (83%), Gaps = 2/787 (0%)
Query: 12 RQVLLLFVLLGMSQAGSETWSFSVAEEMQSGSFVGNLAKDLGLKVRELSSRGARVVSNDK 71
RQVL LF+ G+S AGS +SV EE + GSFV NLAKDLGL EL++RG RVVS+D
Sbjct: 12 RQVLFLFLFWGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELAARGTRVVSDDN 71
Query: 72 KQRLQLDINTGDLLLSETLDREELCGSIEPCVLHLQVLMQNPTQFLQIELQVRDINDHSP 131
KQ L LD +TG+LL +E LDRE+LCG EPC+L+ Q+LM +P Q + EL+VRDINDH+P
Sbjct: 72 KQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDINDHAP 131
Query: 132 IFSEKQMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTISPNSHFHIKMRVIPDNRKY 191
+F +K+ +L+I EN+ G F LE A+D D G+N +++YTISPNS FHI + + Y
Sbjct: 132 VFQDKETVLKISENTAEGTAFRLERAQDPDGGLNGIQNYTISPNSFFHINISGGDEGMIY 191
Query: 192 PELVLDKALDYEELPELSFILSALDGGSPPRSGTALVRVVVVDINDNSPEFEQAFYEVKI 251
PELVLDKALD EE ELS L+ALDGGSP RSGT+ VR+VV+D+NDN+P+F QA YE +
Sbjct: 192 PELVLDKALDREEQGELSLTLTALDGGSPSRSGTSTVRIVVLDVNDNAPQFAQALYETQA 251
Query: 252 RENSILGSLILIVSAWDLDSGTNGEICYTFSHASEDIRKTFEINQKSGEITLRAPLDFET 311
ENS +G LI+ V A D+DSG N E+ Y+F ASE+IR TF+IN SGEI LR LD+E
Sbjct: 252 PENSPIGFLIVKVWAEDVDSGVNAEVSYSFFDASENIRTTFQINPFSGEIFLRELLDYEL 311
Query: 312 IESYSIIIQATDGGGLFGKSTVIIHVIDVNDNAPEITVSSITSPIPENTPETVVMVFSIQ 371
+ SY I IQA DGGGL + V++ V+D NDN PE+ VSS ++ + EN+PET + VF I
Sbjct: 312 VNSYKINIQAMDGGGLSARCRVLVEVLDTNDNPPELIVSSFSNSVAENSPETPLAVFKIN 371
Query: 372 DIDSGDNGRIVCSIPEDLPFVLKSSVENYYTLETERPLDRESTAEYNITITVTDLGIPRL 431
D DSG+NG++VC I E+LPF+LK SVEN+Y L TE LDRE AEYNITITVTDLG PRL
Sbjct: 372 DRDSGENGKMVCYIQENLPFLLKPSVENFYILITEGALDREIRAEYNITITVTDLGTPRL 431
Query: 432 KTEHNTTVLVSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVNYSLL 491
KTEHN TVLVSDVNDNAP FTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQV YSLL
Sbjct: 432 KTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLL 491
Query: 492 PPQDLHLPLASLVSINTDNGHLFALRSLDYEALQAFDFRVGATDRGSPALSSEALVRVLV 551
PPQD HLPLASLVSIN DNGHLFALRSLDYEALQAF+FRVGATDRGSPALS EALVRVLV
Sbjct: 492 PPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSREALVRVLV 551
Query: 552 LDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATE 611
LDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATE
Sbjct: 552 LDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATE 611
Query: 612 PGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLQVLLVDGFSQPYL 671
PGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATL +LLVDGFSQPYL
Sbjct: 612 PGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHLLLVDGFSQPYL 671
Query: 672 PLPEAAPAQAQ--ADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGSCSVPK 729
PLPEAAPAQAQ AD LTVYLVVALASVSSLFL SVLLFVAVRLCRRSRAASVG CSVP+
Sbjct: 672 PLPEAAPAQAQAEADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAASVGRCSVPE 731
Query: 730 GPFPGHLVDVSGTGTLSQSYQYEVCLTGGSETNEFKFLKPVIPNIQAKGLGKNSEENSTF 789
GPFPGHLVDV G TLSQSYQYEVCLTGG T+EFKFLKPVI +IQA+G G+ EENSTF
Sbjct: 732 GPFPGHLVDVRGAETLSQSYQYEVCLTGGPGTSEFKFLKPVISDIQAQGPGRKGEENSTF 791
Query: 790 RNSFGFN 796
RNSFGFN
Sbjct: 792 RNSFGFN 798
>gi|9256618 protocadherin beta 6 precursor [Homo sapiens]
Length = 794
Score = 1117 bits (2889), Expect = 0.0
Identities = 570/785 (72%), Positives = 647/785 (82%), Gaps = 1/785 (0%)
Query: 12 RQVLLLFVLLGMSQAGSETWSFSVAEEMQSGSFVGNLAKDLGLKVRELSSRGARVVSNDK 71
RQV +L+ + GSE+ +SV EE +SG+FV NL KDLGL+V EL+SRGARVV
Sbjct: 11 RQVAFFILLMLWGEVGSESIQYSVLEETESGTFVANLTKDLGLRVGELASRGARVVFKGN 70
Query: 72 KQRLQLDINTGDLLLSETLDREELCGSIEPCVLHLQVLMQNPTQFLQIELQVRDINDHSP 131
+Q LQ D T DLLL+E LDREELCGS EPCVL QVL++NP QF Q L+VRDINDH+P
Sbjct: 71 RQHLQFDPQTHDLLLNEKLDREELCGSTEPCVLPFQVLLENPLQFFQASLRVRDINDHAP 130
Query: 132 IFSEKQMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTISPNSHFHIKMRVIPDNRKY 191
F ++MLL+I E + G +F L+ A DLD G N ++ YTIS N HFH+ R + RK+
Sbjct: 131 EFPAREMLLKISEITMPGKIFPLKMAHDLDTGSNGLQRYTISSNPHFHVLTRNRSEGRKF 190
Query: 192 PELVLDKALDYEELPELSFILSALDGGSPPRSGTALVRVVVVDINDNSPEFEQAFYEVKI 251
PELVLDK LD EE P+L L ALDGGSPPRSGT+ +++ V+DINDN PEF Q YE ++
Sbjct: 191 PELVLDKPLDREEQPQLRLTLIALDGGSPPRSGTSEIQIQVLDINDNVPEFAQELYEAQV 250
Query: 252 RENSILGSLILIVSAWDLDSGTNGEICYTFSHASEDIRKTFEINQKSGEITLRAPLDFET 311
EN+ LGSL++ VSA DLD+G+ G++ Y +D+ + FEIN +GEI LR LDFE
Sbjct: 251 PENNPLGSLVITVSARDLDAGSFGKVSYALFQV-DDVNQPFEINAITGEIRLRKALDFEE 309
Query: 312 IESYSIIIQATDGGGLFGKSTVIIHVIDVNDNAPEITVSSITSPIPENTPETVVMVFSIQ 371
I+SY + ++ATDGGGL GK ++++ V+DVNDNAPE+T+S S IPEN PE V VFS+
Sbjct: 310 IQSYDVDVEATDGGGLSGKCSLVVRVLDVNDNAPELTMSFFISLIPENLPEITVAVFSVS 369
Query: 372 DIDSGDNGRIVCSIPEDLPFVLKSSVENYYTLETERPLDRESTAEYNITITVTDLGIPRL 431
D DSG N +++CSI +LPF+L+ SVEN+YTL TE LDRES AEYNITITVTDLG PRL
Sbjct: 370 DADSGHNQQVICSIENNLPFLLRPSVENFYTLVTEGALDRESRAEYNITITVTDLGTPRL 429
Query: 432 KTEHNTTVLVSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVNYSLL 491
KT+ + TV VSDVNDN P FTQTSYTLFVRENNSPALHIGSVSATDRDSG NAQV YSLL
Sbjct: 430 KTQQSITVQVSDVNDNVPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGINAQVTYSLL 489
Query: 492 PPQDLHLPLASLVSINTDNGHLFALRSLDYEALQAFDFRVGATDRGSPALSSEALVRVLV 551
PPQD HLPL+SLVSIN DNGHLFALRSLDYEALQ+F+FRVGATDRGSPALSSEALVR+LV
Sbjct: 490 PPQDPHLPLSSLVSINADNGHLFALRSLDYEALQSFEFRVGATDRGSPALSSEALVRLLV 549
Query: 552 LDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATE 611
LDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATE
Sbjct: 550 LDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATE 609
Query: 612 PGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLQVLLVDGFSQPYL 671
GLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATL VLLVDGFSQPYL
Sbjct: 610 LGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPYL 669
Query: 672 PLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGSCSVPKGP 731
PLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVG SVP+GP
Sbjct: 670 PLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRYSVPEGP 729
Query: 732 FPGHLVDVSGTGTLSQSYQYEVCLTGGSETNEFKFLKPVIPNIQAKGLGKNSEENSTFRN 791
FPGHLVDVSGTGTLSQSYQY+VCLTGGSETNEFKFLKP++PN +G + EE T RN
Sbjct: 730 FPGHLVDVSGTGTLSQSYQYKVCLTGGSETNEFKFLKPIMPNFPPQGTEREMEETPTSRN 789
Query: 792 SFGFN 796
SF F+
Sbjct: 790 SFPFS 794
>gi|14195607 protocadherin beta 1 precursor [Homo sapiens]
Length = 818
Score = 767 bits (1980), Expect = 0.0
Identities = 395/775 (50%), Positives = 538/775 (69%), Gaps = 6/775 (0%)
Query: 5 GTRTQQI--RQVLLLFVLLGMSQAGSETWSFSVAEEMQSGSFVGNLAKDLGLKVRELSSR 62
GTR + + RQV L + L +S + T +SVAEEM+SGSFV N+AKDLGL+V +L++R
Sbjct: 3 GTRRKSLQNRQVGSLLIFLCISVGDATTIRYSVAEEMESGSFVANVAKDLGLEVGKLAAR 62
Query: 63 GARVVSNDKKQRLQLDINTGDLLLSETLDREELCGSIEPCVLHLQVLMQNPTQFLQIELQ 122
GAR+VS K +L TGDL + E LDRE LCG +PCVLH +V++ P Q + E++
Sbjct: 63 GARLVSEGNKMHFRLHRKTGDLFVKEKLDRESLCGKADPCVLHFEVVLVEPLQSFRAEVR 122
Query: 123 VRDINDHSPIFSEKQMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTISPNSHFHIKM 182
V DIND++P+F K+ LL+IPE++P+G+ F L+SA+DLDVG+N +++YT+S N +FH+
Sbjct: 123 VFDINDNAPVFLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSANGYFHLHT 182
Query: 183 RVIPDNRKYPELVLDKALDYEELPELSFILSALDGGSPPRSGTALVRVVVVDINDNSPEF 242
R KY ELVL+K LD EE PE++ ++A+DGGSPP+SGTA + VVV+D+ND+ P+F
Sbjct: 183 RFCSHGPKYAELVLNKPLDREEQPEVNLTITAVDGGSPPKSGTAHIHVVVLDVNDHVPQF 242
Query: 243 EQAFYEVKIRENSILGSLILIVSAWDLDSGTNGEICYTFSHASEDIRKTFEINQKSGEIT 302
+ Y ++ ENS GSL+ V+A DLD GTN I Y+ + E I KTF+I+ ++GE+
Sbjct: 243 SRLVYRAQVSENSPNGSLVATVTAVDLDEGTNKAITYSLAQNPEAILKTFQIDPQNGEVR 302
Query: 303 LRAPLDFETIESYSIIIQATDGGGLFGKSTVIIHVIDVNDNAPEITVSSITSPIPENTP- 361
LR PLDFE IE+Y I IQATDGGGL S V++ V+DVNDN PE+ VSS++SP+PE++P
Sbjct: 303 LRGPLDFEAIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVMVSSVSSPLPEDSPP 362
Query: 362 ETVVMVFSIQDIDSGDNGRIVCSIPEDLPFVLKSSVENYYTLETERPLDRESTAEYNITI 421
+TVV +F+I+D D G++ C + EDLPFV+K + N Y+L T+R LDRE + YNITI
Sbjct: 363 QTVVALFTIRDRDIRVGGKVTCFLREDLPFVIKPTFGNSYSLVTDRSLDREEVSGYNITI 422
Query: 422 TVTDLGIPRLKTEHNTTVLVSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSG 481
D G P L E VL+SDVNDN P F + SY L VRENNSPA+ IG V A D D G
Sbjct: 423 VAMDTGPPSLSAETMIEVLISDVNDNPPIFREDSYILTVRENNSPAVFIGKVHAEDLDLG 482
Query: 482 TNAQVNYSLLPPQDLHLPLASLVSINTDNGHLFALRSLDYEALQAFDFRVGATDRGSPAL 541
NAQ+ YSLLPP++ L + + +SIN+ NG L+ALR++DYEA+Q F F V ATD G +L
Sbjct: 483 ENAQITYSLLPPKNGDLSVFAYISINSGNGKLYALRTMDYEAIQDFQFVVKATDGGFLSL 542
Query: 542 SSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAW 601
SS+ VRV+VLD NDN P +LYPLQNG+ PC +LVPR+AE GYLVTKVVAVDGDSGQN+W
Sbjct: 543 SSQVTVRVVVLDDNDNRPMILYPLQNGTLPCNDLVPRSAEAGYLVTKVVAVDGDSGQNSW 602
Query: 602 LSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLQVL 661
LSY LLKAT+ GLF V NGE+ T R +SERD +L++LV+D+G+P S T +L +L
Sbjct: 603 LSYHLLKATDLGLFSVQRQNGEIHTLRQISERDPMMQKLIILVQDHGQPALSTTVSLNIL 662
Query: 662 LVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSR--- 718
LVDGFS+PYL + + + T YLV++L +S LFL SV++ + + ++ +
Sbjct: 663 LVDGFSEPYLQFQDPTKHSRKVNPSTKYLVISLVILSFLFLLSVIVIFIIHVYQKIKYRE 722
Query: 719 AASVGSCSVPKGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSETNEFKFLKPVIPN 773
++ F +LV G G+LS+ YE+C G+ +EF+FLK +PN
Sbjct: 723 KFTIQEHFYDDCNFSNNLVQGQGNGSLSRPCPYEMCSATGTGNSEFRFLKRFMPN 777
>gi|14196471 protocadherin gamma subfamily A, 5 isoform 2 precursor
[Homo sapiens]
Length = 813
Score = 637 bits (1643), Expect = 0.0
Identities = 352/763 (46%), Positives = 488/763 (63%), Gaps = 7/763 (0%)
Query: 13 QVLLLFVLLG-MSQAGSETWSFSVAEEMQSGSFVGNLAKDLGLKVRELSSRGARVVSNDK 71
++LL F+LLG + + GS +S+ EE+ GSFVGN+AKDLGL+ +EL+ RG R+VS +
Sbjct: 12 ELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSRGR 71
Query: 72 KQRLQLDINTGDLLLSETLDREELCGSIEPCVLHLQVLMQNPTQFLQIELQVRDINDHSP 131
Q L+ +G L+ + +DREELC CV++ +L++N + +E+++ DIND+ P
Sbjct: 72 TQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDNFP 131
Query: 132 IFSEKQMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTISPNSHFHIKMRVIPDNRKY 191
F ++++ +++ EN+ G +L A+D DVG+N+++SY +S N HF + + D +KY
Sbjct: 132 RFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQKY 191
Query: 192 PELVLDKALDYEELPELSFILSALDGGSPPRSGTALVRVVVVDINDNSPEFEQAFYEVKI 251
PELVL++ LD E+ +L+ALDGG P SGT +RV V+D NDN+P F + Y V +
Sbjct: 192 PELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSVSV 251
Query: 252 RENSILGSLILIVSAWDLDSGTNGEICYTFSHASEDIRKTFEINQKSGEITLRAPLDFET 311
EN +G+ +L+++A D D G NG++ Y+F + E I +TF+++ GEI+ LD+E
Sbjct: 252 PENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDYEE 311
Query: 312 IESYSIIIQATDGGGLFGKSTVIIHVIDVNDNAPEITVSSITSPIPEN-TPETVVMVFSI 370
Y + + A DGG L + V++ V DVNDNAPE+ ++S+TS I E+ P TV+ +FS+
Sbjct: 312 SRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALFSV 371
Query: 371 QDIDSGDNGRIVCSIPEDLPFVLKSSVENYYTLETERPLDRESTAEYNITITVTDLGIPR 430
D DSG+NG I CSIP +LPF L+ SV+NYY L T R LDRE T++YNIT+TV D G P
Sbjct: 372 HDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGTPP 431
Query: 431 LKTEHNTTVLVSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVNYSL 490
L TE + + V+DVNDN P F Q SY+ V ENN + I SV+A D DSG NA+V YSL
Sbjct: 432 LSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTYSL 491
Query: 491 LPPQDLHLPLASLVSINTDNGHLFALRSLDYEALQAFDFRVGATDRGSPALSSEALVRVL 550
PL+S VSIN+D G L+ALRS DYE L+ V A+D G+P LSS + +
Sbjct: 492 AEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLSLF 551
Query: 551 VLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 609
VLD NDN+P +LYP L + EL PR+AEPGYLVTKVVAVD DSGQNAWLSY+LLKA
Sbjct: 552 VLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKA 611
Query: 610 TEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLQVLLVDGFSQP 669
+EPGLF V H GEVRTAR L +RDA K LVV V+D+G+PP SAT T+ V + D
Sbjct: 612 SEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIPDI 671
Query: 670 YLPLPE-AAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCR--RSRAASVGSCS 726
L P + LT+YLVVA+A+VS +FL V++ + +RL R +SR
Sbjct: 672 LADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEGSR 731
Query: 727 VPKGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSETNEFKFLKP 769
+ P H V V G Q+Y +EV LT S + F +P
Sbjct: 732 LAGVP-ASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQP 773
>gi|11056024 protocadherin gamma subfamily A, 5 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 637 bits (1643), Expect = 0.0
Identities = 352/763 (46%), Positives = 488/763 (63%), Gaps = 7/763 (0%)
Query: 13 QVLLLFVLLG-MSQAGSETWSFSVAEEMQSGSFVGNLAKDLGLKVRELSSRGARVVSNDK 71
++LL F+LLG + + GS +S+ EE+ GSFVGN+AKDLGL+ +EL+ RG R+VS +
Sbjct: 12 ELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSRGR 71
Query: 72 KQRLQLDINTGDLLLSETLDREELCGSIEPCVLHLQVLMQNPTQFLQIELQVRDINDHSP 131
Q L+ +G L+ + +DREELC CV++ +L++N + +E+++ DIND+ P
Sbjct: 72 TQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDNFP 131
Query: 132 IFSEKQMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTISPNSHFHIKMRVIPDNRKY 191
F ++++ +++ EN+ G +L A+D DVG+N+++SY +S N HF + + D +KY
Sbjct: 132 RFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQKY 191
Query: 192 PELVLDKALDYEELPELSFILSALDGGSPPRSGTALVRVVVVDINDNSPEFEQAFYEVKI 251
PELVL++ LD E+ +L+ALDGG P SGT +RV V+D NDN+P F + Y V +
Sbjct: 192 PELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSVSV 251
Query: 252 RENSILGSLILIVSAWDLDSGTNGEICYTFSHASEDIRKTFEINQKSGEITLRAPLDFET 311
EN +G+ +L+++A D D G NG++ Y+F + E I +TF+++ GEI+ LD+E
Sbjct: 252 PENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDYEE 311
Query: 312 IESYSIIIQATDGGGLFGKSTVIIHVIDVNDNAPEITVSSITSPIPEN-TPETVVMVFSI 370
Y + + A DGG L + V++ V DVNDNAPE+ ++S+TS I E+ P TV+ +FS+
Sbjct: 312 SRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALFSV 371
Query: 371 QDIDSGDNGRIVCSIPEDLPFVLKSSVENYYTLETERPLDRESTAEYNITITVTDLGIPR 430
D DSG+NG I CSIP +LPF L+ SV+NYY L T R LDRE T++YNIT+TV D G P
Sbjct: 372 HDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGTPP 431
Query: 431 LKTEHNTTVLVSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVNYSL 490
L TE + + V+DVNDN P F Q SY+ V ENN + I SV+A D DSG NA+V YSL
Sbjct: 432 LSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTYSL 491
Query: 491 LPPQDLHLPLASLVSINTDNGHLFALRSLDYEALQAFDFRVGATDRGSPALSSEALVRVL 550
PL+S VSIN+D G L+ALRS DYE L+ V A+D G+P LSS + +
Sbjct: 492 AEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLSLF 551
Query: 551 VLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 609
VLD NDN+P +LYP L + EL PR+AEPGYLVTKVVAVD DSGQNAWLSY+LLKA
Sbjct: 552 VLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKA 611
Query: 610 TEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLQVLLVDGFSQP 669
+EPGLF V H GEVRTAR L +RDA K LVV V+D+G+PP SAT T+ V + D
Sbjct: 612 SEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIPDI 671
Query: 670 YLPLPE-AAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCR--RSRAASVGSCS 726
L P + LT+YLVVA+A+VS +FL V++ + +RL R +SR
Sbjct: 672 LADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEGSR 731
Query: 727 VPKGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSETNEFKFLKP 769
+ P H V V G Q+Y +EV LT S + F +P
Sbjct: 732 LAGVP-ASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQP 773
>gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 635 bits (1638), Expect = 0.0
Identities = 349/773 (45%), Positives = 482/773 (62%), Gaps = 4/773 (0%)
Query: 1 MENQGTRTQQIRQVLLLFVLLGMSQAGSETWSFSVAEEMQSGSFVGNLAKDLGLKVRELS 60
M+ Q T R +LL L + +AG+ +SV EE GSFVGN+AKDLGL+ +EL+
Sbjct: 1 MKIQKKLTGCSRLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELA 60
Query: 61 SRGARVVSNDKKQRLQLDINTGDLLLSETLDREELCGSIEPCVLHLQVLMQNPTQFLQIE 120
G R+VS + L+ +G L+ + +DREELC PC++ +L+++ + +E
Sbjct: 61 DGGVRIVSRGRMPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVE 120
Query: 121 LQVRDINDHSPIFSEKQMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTISPNSHFHI 180
+++ DIND++P F +++ ++ E + G L +DLDVG+N+++SY +S N HF +
Sbjct: 121 VEIIDINDNTPQFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSL 180
Query: 181 KMRVIPDNRKYPELVLDKALDYEELPELSFILSALDGGSPPRSGTALVRVVVVDINDNSP 240
++ D ++PE+VL LD EE IL+A DGG P RSGT + + VVD NDN P
Sbjct: 181 DVQQGADGPQHPEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPP 240
Query: 241 EFEQAFYEVKIRENSILGSLILIVSAWDLDSGTNGEICYTFSHASEDIRKTFEINQKSGE 300
F QA Y + + EN LG+ +L+V+A D D G NGE+ Y+F + + + F ++ +GE
Sbjct: 241 AFTQAQYHINVPENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGE 300
Query: 301 ITLRAPLDFETIESYSIIIQATDGGGLFGKSTVIIHVIDVNDNAPEITVSSITSPIPEN- 359
I+ + PLDFE + YS+ +QA DG GL K V+I V+DVNDNAPE+T++S+T+ +PEN
Sbjct: 301 ISNKEPLDFEEYKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENF 360
Query: 360 TPETVVMVFSIQDIDSGDNGRIVCSIPEDLPFVLKSSVENYYTLETERPLDRESTAEYNI 419
P T++ + S+ D DSGDNG C IP +LPF L+ V+NYY L TER LDRE + YNI
Sbjct: 361 PPGTIIALISVHDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNI 420
Query: 420 TITVTDLGIPRLKTEHNTTVLVSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRD 479
TIT D G P L TE + ++LV+D+NDN+P F Q SY+ ++ ENN I SV A D D
Sbjct: 421 TITAIDQGTPALSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLD 480
Query: 480 SGTNAQVNYSLLPPQDLHLPLASLVSINTDNGHLFALRSLDYEALQAFDFRVGATDRGSP 539
S NAQ+ YSL+ PL++ +SIN+D G L+ALRS DYE + +V A D G P
Sbjct: 481 SNENAQITYSLIEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDP 540
Query: 540 ALSSEALVRVLVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQ 598
LSS + + +LD NDN+P +LYP L + EL P +AEPGYLVTKVVAVD DSGQ
Sbjct: 541 PLSSNVSLSLFLLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQ 600
Query: 599 NAWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATL 658
NAWLSY+LLKA+EPGLF V H GEVRTAR L +RDA K LVV V+D+G+PP SAT TL
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
Query: 659 QVLLVDGFSQPYLPLPEAAPAQAQADS-LTVYLVVALASVSSLFLFSVLLFVAVRLCRRS 717
V + D S L P+ DS LT+YLVVA A+VS +FL V++ +A RL R
Sbjct: 661 TVAVADRISDILADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWH 720
Query: 718 RAASVGSCSVPKGPFPG-HLVDVSGTGTLSQSYQYEVCLTGGSETNEFKFLKP 769
++ + + PG H V V G Q+Y +EV LT S + F +P
Sbjct: 721 KSRLLQASGGGLASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQP 773
>gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precursor
[Homo sapiens]
Length = 823
Score = 635 bits (1638), Expect = 0.0
Identities = 349/773 (45%), Positives = 482/773 (62%), Gaps = 4/773 (0%)
Query: 1 MENQGTRTQQIRQVLLLFVLLGMSQAGSETWSFSVAEEMQSGSFVGNLAKDLGLKVRELS 60
M+ Q T R +LL L + +AG+ +SV EE GSFVGN+AKDLGL+ +EL+
Sbjct: 1 MKIQKKLTGCSRLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELA 60
Query: 61 SRGARVVSNDKKQRLQLDINTGDLLLSETLDREELCGSIEPCVLHLQVLMQNPTQFLQIE 120
G R+VS + L+ +G L+ + +DREELC PC++ +L+++ + +E
Sbjct: 61 DGGVRIVSRGRMPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVE 120
Query: 121 LQVRDINDHSPIFSEKQMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTISPNSHFHI 180
+++ DIND++P F +++ ++ E + G L +DLDVG+N+++SY +S N HF +
Sbjct: 121 VEIIDINDNTPQFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSL 180
Query: 181 KMRVIPDNRKYPELVLDKALDYEELPELSFILSALDGGSPPRSGTALVRVVVVDINDNSP 240
++ D ++PE+VL LD EE IL+A DGG P RSGT + + VVD NDN P
Sbjct: 181 DVQQGADGPQHPEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPP 240
Query: 241 EFEQAFYEVKIRENSILGSLILIVSAWDLDSGTNGEICYTFSHASEDIRKTFEINQKSGE 300
F QA Y + + EN LG+ +L+V+A D D G NGE+ Y+F + + + F ++ +GE
Sbjct: 241 AFTQAQYHINVPENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGE 300
Query: 301 ITLRAPLDFETIESYSIIIQATDGGGLFGKSTVIIHVIDVNDNAPEITVSSITSPIPEN- 359
I+ + PLDFE + YS+ +QA DG GL K V+I V+DVNDNAPE+T++S+T+ +PEN
Sbjct: 301 ISNKEPLDFEEYKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENF 360
Query: 360 TPETVVMVFSIQDIDSGDNGRIVCSIPEDLPFVLKSSVENYYTLETERPLDRESTAEYNI 419
P T++ + S+ D DSGDNG C IP +LPF L+ V+NYY L TER LDRE + YNI
Sbjct: 361 PPGTIIALISVHDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNI 420
Query: 420 TITVTDLGIPRLKTEHNTTVLVSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRD 479
TIT D G P L TE + ++LV+D+NDN+P F Q SY+ ++ ENN I SV A D D
Sbjct: 421 TITAIDQGTPALSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLD 480
Query: 480 SGTNAQVNYSLLPPQDLHLPLASLVSINTDNGHLFALRSLDYEALQAFDFRVGATDRGSP 539
S NAQ+ YSL+ PL++ +SIN+D G L+ALRS DYE + +V A D G P
Sbjct: 481 SNENAQITYSLIEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDP 540
Query: 540 ALSSEALVRVLVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQ 598
LSS + + +LD NDN+P +LYP L + EL P +AEPGYLVTKVVAVD DSGQ
Sbjct: 541 PLSSNVSLSLFLLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQ 600
Query: 599 NAWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATL 658
NAWLSY+LLKA+EPGLF V H GEVRTAR L +RDA K LVV V+D+G+PP SAT TL
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
Query: 659 QVLLVDGFSQPYLPLPEAAPAQAQADS-LTVYLVVALASVSSLFLFSVLLFVAVRLCRRS 717
V + D S L P+ DS LT+YLVVA A+VS +FL V++ +A RL R
Sbjct: 661 TVAVADRISDILADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWH 720
Query: 718 RAASVGSCSVPKGPFPG-HLVDVSGTGTLSQSYQYEVCLTGGSETNEFKFLKP 769
++ + + PG H V V G Q+Y +EV LT S + F +P
Sbjct: 721 KSRLLQASGGGLASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQP 773
>gi|14196451 protocadherin gamma subfamily A, 11 isoform 2 precursor
[Homo sapiens]
Length = 837
Score = 635 bits (1637), Expect = 0.0
Identities = 349/777 (44%), Positives = 496/777 (63%), Gaps = 11/777 (1%)
Query: 1 MENQGTRTQQIRQVLLLFVLLGMSQA-GSETWSFSVAEEMQSGSFVGNLAKDLGLKVREL 59
M N+ R + R +LLL + LG + + +SV EE + GSFVGN++KDLGL+ REL
Sbjct: 1 MANRLQRGDRSRLLLLLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPREL 60
Query: 60 SSRGARVVSNDKKQRLQLDINTGDLLLSETLDREELCGSIEPCVLHLQVLMQNPTQFLQI 119
+ RG R+VS K Q ++ +G L+ + +DREELC ++ C L++++L+++ + +
Sbjct: 61 AKRGVRIVSRGKTQLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGV 120
Query: 120 ELQVRDINDHSPIFSEKQMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTISPNSHFH 179
E+++ DIND++P F E ++ +++ E++ GA F L +A+D DVG+N+++SY +SPN++F
Sbjct: 121 EVEIIDINDNAPSFQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFS 180
Query: 180 IKMRVIPDNRKYPELVLDKALDYEELPELSFILSALDGGSPPRSGTALVRVVVVDINDNS 239
+++R D K PELVL+ +LD E+ +L+ALDGG P R G +RVVV+D+ND+
Sbjct: 181 LQLRGRTDGAKNPELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHI 240
Query: 240 PEFEQAFYEVKIRENSILGSLILIVSAWDLDSGTNGEICYTFSHASEDIRKTFEINQKSG 299
P F Q+ Y V + EN G+ +L+V+A D D G NGE+ Y+F + + F+++ ++G
Sbjct: 241 PMFTQSVYRVSVPENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTG 300
Query: 300 EITLRAPLDFETIESYSIIIQATDGGGLFGKSTVIIHVIDVNDNAPEITVSSITSPIPEN 359
E+ +R LDFE Y + IQ DGGGLF +T++I V+DVNDNAPEIT++S + I EN
Sbjct: 301 EVQVRGSLDFEKYRFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILEN 360
Query: 360 TPE-TVVMVFSIQDIDSGDNGRIVCSIPEDLPFVLKSSVENYYTLETERPLDRESTAEYN 418
+P TV+ + ++QD DSG+NG++ C IP LPF L+ + NYY L T R LDRE YN
Sbjct: 361 SPPGTVIALLNVQDQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYN 420
Query: 419 ITITVTDLGIPRLKTEHNTTVLVSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDR 478
IT+T TD G P L E + + V+D NDN P F +SY+ ++ ENN I SV+A D
Sbjct: 421 ITLTATDQGSPPLSAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDP 480
Query: 479 DSGTNAQVNYSLLPPQDLHLPLASLVSINTDNGHLFALRSLDYEALQAFDFRVGATDRGS 538
DS NA V YSL +PL+S VSIN++ G L+AL+S DYE + + RV A D G
Sbjct: 481 DSKQNALVTYSLTDDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGD 540
Query: 539 PALSSEALVRVLVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSG 597
P LSS + + VLD NDN+P +LYP L + EL PR+AEPGYLVTKVVAVD DSG
Sbjct: 541 PPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSG 600
Query: 598 QNAWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATAT 657
QNAWLSY+LLKA+EPGLF V H GEVRTAR L +RDA K LVV V+D+G+PP SAT T
Sbjct: 601 QNAWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVT 660
Query: 658 LQVLLVDGFSQPYLPLPE-AAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCR- 715
L V + D + L + A ++ L++YLVVA+A+VS +FL V++ +A+RL R
Sbjct: 661 LTVAVADSIPEVLADLGSLESLANSETSDLSLYLVVAVAAVSCIFLVFVIVLLALRLWRW 720
Query: 716 ---RSRAASVGSCSVPKGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSETNEFKFLKP 769
R AS G + G H V V G Q+Y +EV L S+ + F +P
Sbjct: 721 HKSRLLQASEGGLA---GMPTSHFVGVDGVQAFLQTYSHEVSLIADSQKSHLIFPQP 774
>gi|11128039 protocadherin gamma subfamily A, 11 isoform 1 precursor
[Homo sapiens]
Length = 935
Score = 635 bits (1637), Expect = 0.0
Identities = 349/777 (44%), Positives = 496/777 (63%), Gaps = 11/777 (1%)
Query: 1 MENQGTRTQQIRQVLLLFVLLGMSQA-GSETWSFSVAEEMQSGSFVGNLAKDLGLKVREL 59
M N+ R + R +LLL + LG + + +SV EE + GSFVGN++KDLGL+ REL
Sbjct: 1 MANRLQRGDRSRLLLLLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPREL 60
Query: 60 SSRGARVVSNDKKQRLQLDINTGDLLLSETLDREELCGSIEPCVLHLQVLMQNPTQFLQI 119
+ RG R+VS K Q ++ +G L+ + +DREELC ++ C L++++L+++ + +
Sbjct: 61 AKRGVRIVSRGKTQLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGV 120
Query: 120 ELQVRDINDHSPIFSEKQMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTISPNSHFH 179
E+++ DIND++P F E ++ +++ E++ GA F L +A+D DVG+N+++SY +SPN++F
Sbjct: 121 EVEIIDINDNAPSFQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFS 180
Query: 180 IKMRVIPDNRKYPELVLDKALDYEELPELSFILSALDGGSPPRSGTALVRVVVVDINDNS 239
+++R D K PELVL+ +LD E+ +L+ALDGG P R G +RVVV+D+ND+
Sbjct: 181 LQLRGRTDGAKNPELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHI 240
Query: 240 PEFEQAFYEVKIRENSILGSLILIVSAWDLDSGTNGEICYTFSHASEDIRKTFEINQKSG 299
P F Q+ Y V + EN G+ +L+V+A D D G NGE+ Y+F + + F+++ ++G
Sbjct: 241 PMFTQSVYRVSVPENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTG 300
Query: 300 EITLRAPLDFETIESYSIIIQATDGGGLFGKSTVIIHVIDVNDNAPEITVSSITSPIPEN 359
E+ +R LDFE Y + IQ DGGGLF +T++I V+DVNDNAPEIT++S + I EN
Sbjct: 301 EVQVRGSLDFEKYRFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILEN 360
Query: 360 TPE-TVVMVFSIQDIDSGDNGRIVCSIPEDLPFVLKSSVENYYTLETERPLDRESTAEYN 418
+P TV+ + ++QD DSG+NG++ C IP LPF L+ + NYY L T R LDRE YN
Sbjct: 361 SPPGTVIALLNVQDQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYN 420
Query: 419 ITITVTDLGIPRLKTEHNTTVLVSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDR 478
IT+T TD G P L E + + V+D NDN P F +SY+ ++ ENN I SV+A D
Sbjct: 421 ITLTATDQGSPPLSAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDP 480
Query: 479 DSGTNAQVNYSLLPPQDLHLPLASLVSINTDNGHLFALRSLDYEALQAFDFRVGATDRGS 538
DS NA V YSL +PL+S VSIN++ G L+AL+S DYE + + RV A D G
Sbjct: 481 DSKQNALVTYSLTDDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGD 540
Query: 539 PALSSEALVRVLVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSG 597
P LSS + + VLD NDN+P +LYP L + EL PR+AEPGYLVTKVVAVD DSG
Sbjct: 541 PPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSG 600
Query: 598 QNAWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATAT 657
QNAWLSY+LLKA+EPGLF V H GEVRTAR L +RDA K LVV V+D+G+PP SAT T
Sbjct: 601 QNAWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVT 660
Query: 658 LQVLLVDGFSQPYLPLPE-AAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCR- 715
L V + D + L + A ++ L++YLVVA+A+VS +FL V++ +A+RL R
Sbjct: 661 LTVAVADSIPEVLADLGSLESLANSETSDLSLYLVVAVAAVSCIFLVFVIVLLALRLWRW 720
Query: 716 ---RSRAASVGSCSVPKGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSETNEFKFLKP 769
R AS G + G H V V G Q+Y +EV L S+ + F +P
Sbjct: 721 HKSRLLQASEGGLA---GMPTSHFVGVDGVQAFLQTYSHEVSLIADSQKSHLIFPQP 774
>gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precursor
[Homo sapiens]
Length = 936
Score = 634 bits (1636), Expect = 0.0
Identities = 352/775 (45%), Positives = 485/775 (62%), Gaps = 11/775 (1%)
Query: 3 NQGTRTQQIRQVLLLFVLLGMS-QAGSETWSFSVAEEMQSGSFVGNLAKDLGLKVRELSS 61
N+ ++ ++LL + G+ +AG+ S+S+ EE++ GSFVGN++KDLGL REL+
Sbjct: 6 NRSKESKDCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAE 65
Query: 62 RGARVVSNDKKQRLQLDINTGDLLLSETLDREELCGSIEPCVLHLQVLMQNPTQFLQIEL 121
RG R+VS + Q L+ +G L+ + +DREELC CV+ +L+++ + IE+
Sbjct: 66 RGVRIVSRGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEI 125
Query: 122 QVRDINDHSPIFSEKQMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTISPNSHFHIK 181
+V DIND++P F + + ++I EN G F L A D DVG+N+++SY +SPN HF ++
Sbjct: 126 EVTDINDNAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLR 185
Query: 182 MRVIPDNRKYPELVLDKALDYEELPELSFILSALDGGSPPRSGTALVRVVVVDINDNSPE 241
++ + KYPELVL+ +LD EE +L+A DGG P RSGT LV V V D NDN+P
Sbjct: 186 VQSRANGVKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPV 245
Query: 242 FEQAFYEVKIRENSILGSLILIVSAWDLDSGTNGEICYTFSHASEDIRKTFEINQKSGEI 301
F Y V + EN +G+ +L V+A D D G NGE+ Y+F + F++N+ +GEI
Sbjct: 246 FTLPEYRVSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEI 305
Query: 302 TLRAPLDFETIESYSIIIQATDGGGLFGKSTVIIHVIDVNDNAPEITVSSITSPIPENTP 361
+ LD+E Y I IQA DGG + V+I V DVNDN+PE+T++S+ SP+ E++P
Sbjct: 306 KISENLDYEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSP 365
Query: 362 -ETVVMVFSIQDIDSGDNGRIVCSIPEDLPFVLKSSVENYYTLETERPLDRESTAEYNIT 420
TVV + ++ D+DS NG++ CSI LPF L+ S+++YY L R LDRE + YNIT
Sbjct: 366 LGTVVALLNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNIT 425
Query: 421 ITVTDLGIPRLKTEHNTTVLVSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
+T TD G P L TE + + V+D+NDN PTF+Q SY ++ ENN+ I SV+A D DS
Sbjct: 426 VTATDGGSPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDS 485
Query: 481 GTNAQVNYSLLPPQDLHLPLASLVSINTDNGHLFALRSLDYEALQAFDFRVGATDRGSPA 540
NAQ+ YSL +PL+S +SIN+D G L+ALRS DYE +V A+D G P
Sbjct: 486 KENAQIIYSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPP 545
Query: 541 LSSEALVRVLVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN 599
LSS + + VLD NDN+P +LYP L + EL PR+AEPGYLVTKVVAVD DSGQN
Sbjct: 546 LSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQN 605
Query: 600 AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLQ 659
AWLSY+LLKA+EPGLF V H GEVRTAR L +RDA K LVV V+D+G+PP SAT TL
Sbjct: 606 AWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLT 665
Query: 660 VLLVDGFSQPYLPLPE-AAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCR--- 715
V + D Q L +PA ++ LT+YLVVA+A+VS +FL V++ +A RL R
Sbjct: 666 VAVADSIPQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHK 725
Query: 716 -RSRAASVGSCSVPKGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSETNEFKFLKP 769
R AS G + G H V V G Q+Y +EV LT S + F +P
Sbjct: 726 SRLLQASGGGLTGVSG---SHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQP 777
>gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precursor
[Homo sapiens]
Length = 850
Score = 634 bits (1636), Expect = 0.0
Identities = 352/775 (45%), Positives = 485/775 (62%), Gaps = 11/775 (1%)
Query: 3 NQGTRTQQIRQVLLLFVLLGMS-QAGSETWSFSVAEEMQSGSFVGNLAKDLGLKVRELSS 61
N+ ++ ++LL + G+ +AG+ S+S+ EE++ GSFVGN++KDLGL REL+
Sbjct: 6 NRSKESKDCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAE 65
Query: 62 RGARVVSNDKKQRLQLDINTGDLLLSETLDREELCGSIEPCVLHLQVLMQNPTQFLQIEL 121
RG R+VS + Q L+ +G L+ + +DREELC CV+ +L+++ + IE+
Sbjct: 66 RGVRIVSRGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEI 125
Query: 122 QVRDINDHSPIFSEKQMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTISPNSHFHIK 181
+V DIND++P F + + ++I EN G F L A D DVG+N+++SY +SPN HF ++
Sbjct: 126 EVTDINDNAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLR 185
Query: 182 MRVIPDNRKYPELVLDKALDYEELPELSFILSALDGGSPPRSGTALVRVVVVDINDNSPE 241
++ + KYPELVL+ +LD EE +L+A DGG P RSGT LV V V D NDN+P
Sbjct: 186 VQSRANGVKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPV 245
Query: 242 FEQAFYEVKIRENSILGSLILIVSAWDLDSGTNGEICYTFSHASEDIRKTFEINQKSGEI 301
F Y V + EN +G+ +L V+A D D G NGE+ Y+F + F++N+ +GEI
Sbjct: 246 FTLPEYRVSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEI 305
Query: 302 TLRAPLDFETIESYSIIIQATDGGGLFGKSTVIIHVIDVNDNAPEITVSSITSPIPENTP 361
+ LD+E Y I IQA DGG + V+I V DVNDN+PE+T++S+ SP+ E++P
Sbjct: 306 KISENLDYEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSP 365
Query: 362 -ETVVMVFSIQDIDSGDNGRIVCSIPEDLPFVLKSSVENYYTLETERPLDRESTAEYNIT 420
TVV + ++ D+DS NG++ CSI LPF L+ S+++YY L R LDRE + YNIT
Sbjct: 366 LGTVVALLNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNIT 425
Query: 421 ITVTDLGIPRLKTEHNTTVLVSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
+T TD G P L TE + + V+D+NDN PTF+Q SY ++ ENN+ I SV+A D DS
Sbjct: 426 VTATDGGSPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDS 485
Query: 481 GTNAQVNYSLLPPQDLHLPLASLVSINTDNGHLFALRSLDYEALQAFDFRVGATDRGSPA 540
NAQ+ YSL +PL+S +SIN+D G L+ALRS DYE +V A+D G P
Sbjct: 486 KENAQIIYSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPP 545
Query: 541 LSSEALVRVLVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN 599
LSS + + VLD NDN+P +LYP L + EL PR+AEPGYLVTKVVAVD DSGQN
Sbjct: 546 LSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQN 605
Query: 600 AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLQ 659
AWLSY+LLKA+EPGLF V H GEVRTAR L +RDA K LVV V+D+G+PP SAT TL
Sbjct: 606 AWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLT 665
Query: 660 VLLVDGFSQPYLPLPE-AAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCR--- 715
V + D Q L +PA ++ LT+YLVVA+A+VS +FL V++ +A RL R
Sbjct: 666 VAVADSIPQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHK 725
Query: 716 -RSRAASVGSCSVPKGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSETNEFKFLKP 769
R AS G + G H V V G Q+Y +EV LT S + F +P
Sbjct: 726 SRLLQASGGGLTGVSG---SHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQP 777
>gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 632 bits (1631), Expect = 0.0
Identities = 353/770 (45%), Positives = 486/770 (63%), Gaps = 19/770 (2%)
Query: 12 RQVLLLFVLLGMSQAGSETWS----FSVAEEMQSGSFVGNLAKDLGLKVRELSSRGARVV 67
R LL +LLG E W+ +SV+EE GSFVG++AKDLGL+ REL+ RG R++
Sbjct: 11 RGFFLLSILLGTPW---EAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRII 67
Query: 68 SNDKKQRLQLDINTGDLLLSETLDREELCGSIEPCVLHLQVLMQNPTQFLQIELQVRDIN 127
S + Q L+ +G L+ + +DREE+C C+++ +LM++ I++++ DIN
Sbjct: 68 SRGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDIN 127
Query: 128 DHSPIFSEKQMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTISPNSHFHIKMRVIPD 187
D+ P F +++ ++I EN+ G F L A D DVG N+++SY +SPN HF + ++ D
Sbjct: 128 DNVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDD 187
Query: 188 NRKYPELVLDKALDYEELPELSFILSALDGGSPPRSGTALVRVVVVDINDNSPEFEQAFY 247
KYPELVL++ LD EE +L+A DGG PPRS TA ++V VVD+ND++P F Y
Sbjct: 188 ETKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQY 247
Query: 248 EVKIRENSILGSLILIVSAWDLDSGTNGEICYTFSHASEDIRKTFEINQKSGEITLRAPL 307
+V + EN +G+ +L V A DLD G NGE+ Y+F + + K F +N +GEI+ L
Sbjct: 248 QVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGL 307
Query: 308 DFETIESYSIIIQATDGGGLFGKSTVIIHVIDVNDNAPEITVSSITSPIPENTP-ETVVM 366
D+E Y + +QA DG G K+ V+I V+DVNDNAPE+T++S++S IPE+TP TV+
Sbjct: 308 DYEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIA 367
Query: 367 VFSIQDIDSGDNGRIVCSIPEDLPFVLKSSVENYYTLETERPLDRESTAEYNITITVTDL 426
+F +QD DSG NG + C+IPE+LPF L+ S++NYY L T + LDRE+ + YNIT+ TD
Sbjct: 368 LFYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDG 427
Query: 427 GIPRLKTEHNTTVLVSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQV 486
G P L E + + V+D NDN PTF +SY++++ ENN I V+A D DS NAQ+
Sbjct: 428 GTPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQI 487
Query: 487 NYSLLPPQDLHLPLASLVSINTDNGHLFALRSLDYEALQAFDFRVGATDRGSPALSSEAL 546
YSL P++S VSIN+D G L+AL+S DYE L+ RV A D G P LSS
Sbjct: 488 TYSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMS 547
Query: 547 VRVLVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQ 605
+ + VLD NDN P +LYP L + EL PR+AEPGYLVTKVVAVD DSGQNAWLSY
Sbjct: 548 LSLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYL 607
Query: 606 LLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLQVLLVDG 665
LLKA+EPGLF V + GEVRTAR L +RDA K LVV V+D+G+PP SAT TL V + D
Sbjct: 608 LLKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADS 667
Query: 666 FSQPYLPLPEAAPAQAQAD-SLTVYLVVALASVSSLFLFSVLLFVAVRLCR--RSR---A 719
+ L P+ + LT+YLVVA+A+VS +FL VL+ +A+RL R +SR A
Sbjct: 668 IPEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQA 727
Query: 720 ASVGSCSVPKGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSETNEFKFLKP 769
+ G +VP H V + G Q+Y +EV LT S + F +P
Sbjct: 728 SEGGLANVP----TSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQP 773
>gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precursor
[Homo sapiens]
Length = 817
Score = 632 bits (1631), Expect = 0.0
Identities = 353/770 (45%), Positives = 486/770 (63%), Gaps = 19/770 (2%)
Query: 12 RQVLLLFVLLGMSQAGSETWS----FSVAEEMQSGSFVGNLAKDLGLKVRELSSRGARVV 67
R LL +LLG E W+ +SV+EE GSFVG++AKDLGL+ REL+ RG R++
Sbjct: 11 RGFFLLSILLGTPW---EAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRII 67
Query: 68 SNDKKQRLQLDINTGDLLLSETLDREELCGSIEPCVLHLQVLMQNPTQFLQIELQVRDIN 127
S + Q L+ +G L+ + +DREE+C C+++ +LM++ I++++ DIN
Sbjct: 68 SRGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDIN 127
Query: 128 DHSPIFSEKQMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTISPNSHFHIKMRVIPD 187
D+ P F +++ ++I EN+ G F L A D DVG N+++SY +SPN HF + ++ D
Sbjct: 128 DNVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDD 187
Query: 188 NRKYPELVLDKALDYEELPELSFILSALDGGSPPRSGTALVRVVVVDINDNSPEFEQAFY 247
KYPELVL++ LD EE +L+A DGG PPRS TA ++V VVD+ND++P F Y
Sbjct: 188 ETKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQY 247
Query: 248 EVKIRENSILGSLILIVSAWDLDSGTNGEICYTFSHASEDIRKTFEINQKSGEITLRAPL 307
+V + EN +G+ +L V A DLD G NGE+ Y+F + + K F +N +GEI+ L
Sbjct: 248 QVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGL 307
Query: 308 DFETIESYSIIIQATDGGGLFGKSTVIIHVIDVNDNAPEITVSSITSPIPENTP-ETVVM 366
D+E Y + +QA DG G K+ V+I V+DVNDNAPE+T++S++S IPE+TP TV+
Sbjct: 308 DYEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIA 367
Query: 367 VFSIQDIDSGDNGRIVCSIPEDLPFVLKSSVENYYTLETERPLDRESTAEYNITITVTDL 426
+F +QD DSG NG + C+IPE+LPF L+ S++NYY L T + LDRE+ + YNIT+ TD
Sbjct: 368 LFYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDG 427
Query: 427 GIPRLKTEHNTTVLVSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQV 486
G P L E + + V+D NDN PTF +SY++++ ENN I V+A D DS NAQ+
Sbjct: 428 GTPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQI 487
Query: 487 NYSLLPPQDLHLPLASLVSINTDNGHLFALRSLDYEALQAFDFRVGATDRGSPALSSEAL 546
YSL P++S VSIN+D G L+AL+S DYE L+ RV A D G P LSS
Sbjct: 488 TYSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMS 547
Query: 547 VRVLVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQ 605
+ + VLD NDN P +LYP L + EL PR+AEPGYLVTKVVAVD DSGQNAWLSY
Sbjct: 548 LSLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYL 607
Query: 606 LLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLQVLLVDG 665
LLKA+EPGLF V + GEVRTAR L +RDA K LVV V+D+G+PP SAT TL V + D
Sbjct: 608 LLKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADS 667
Query: 666 FSQPYLPLPEAAPAQAQAD-SLTVYLVVALASVSSLFLFSVLLFVAVRLCR--RSR---A 719
+ L P+ + LT+YLVVA+A+VS +FL VL+ +A+RL R +SR A
Sbjct: 668 IPEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQA 727
Query: 720 ASVGSCSVPKGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSETNEFKFLKP 769
+ G +VP H V + G Q+Y +EV LT S + F +P
Sbjct: 728 SEGGLANVP----TSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQP 773
>gi|14196468 protocadherin gamma subfamily A, 4 isoform 2 precursor
[Homo sapiens]
Length = 820
Score = 631 bits (1627), Expect = 0.0
Identities = 344/763 (45%), Positives = 483/763 (63%), Gaps = 7/763 (0%)
Query: 13 QVLLLFVLLG-MSQAGSETWSFSVAEEMQSGSFVGNLAKDLGLKVRELSSRGARVVSNDK 71
++L + +LLG + + +E +SV EE + GS VGN+AKDLGL REL+ RG R+VS +
Sbjct: 12 RLLQICLLLGVLVEIRAEQILYSVFEEQEEGSVVGNIAKDLGLAPRELAERGVRIVSRGR 71
Query: 72 KQRLQLDINTGDLLLSETLDREELCGSIEPCVLHLQVLMQNPTQFLQIELQVRDINDHSP 131
Q L+ +G L+ + +DREELC CV +L++L+++ + L++E+++ D+ND+ P
Sbjct: 72 TQLFALNPRSGTLVTAGRIDREELCDRSPNCVTNLEILLEDTVKILRVEVEIIDVNDNPP 131
Query: 132 IFSEKQMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTISPNSHFHIKMRVIPDNRKY 191
F +Q +++ EN GA F L A D DVG+N+++ Y ++ N +F + ++ D KY
Sbjct: 132 SFGTEQREIKVAENENPGARFPLPEAFDPDVGVNSLQGYQLNSNGYFSLDVQSGADGIKY 191
Query: 192 PELVLDKALDYEELPELSFILSALDGGSPPRSGTALVRVVVVDINDNSPEFEQAFYEVKI 251
PELVL++ALD EE +L+A DGG P RSGTA + +++VD NDN+P F Q Y V +
Sbjct: 192 PELVLERALDREEEAVHHLVLTAFDGGDPVRSGTARILIILVDTNDNAPVFTQPEYHVSV 251
Query: 252 RENSILGSLILIVSAWDLDSGTNGEICYTFSHASEDIRKTFEINQKSGEITLRAPLDFET 311
REN +G+ +L V A D D G NG++ Y+F + I + F++N SG+IT+ LD+E
Sbjct: 252 RENVPVGTRLLTVKATDPDEGANGDVTYSFRKVRDKISQLFQLNSLSGDITILGGLDYED 311
Query: 312 IESYSIIIQATDGGGLFGKSTVIIHVIDVNDNAPEITVSSITSPIPE-NTPETVVMVFSI 370
Y I ++A DG GL +S V++ V+D NDNAPE+TV+S+TS + E ++P TV+ +F++
Sbjct: 312 SGFYDIDVEAHDGPGLRARSKVLVTVLDENDNAPEVTVTSLTSSVQESSSPGTVIALFNV 371
Query: 371 QDIDSGDNGRIVCSIPEDLPFVLKSSVENYYTLETERPLDRESTAEYNITITVTDLGIPR 430
D DSG NG + CSIP++LPF L+ + NYY L T R LDRE +EYNIT+T TD G P
Sbjct: 372 HDSDSGGNGLVTCSIPDNLPFTLEKTYGNYYRLLTHRTLDREEVSEYNITVTATDQGTPP 431
Query: 431 LKTEHNTTVLVSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVNYSL 490
L TE + ++ V D+NDN PTF SY+ ++ ENN I S++A D DSG NA++ YSL
Sbjct: 432 LSTETHISLQVMDINDNPPTFPHASYSAYIPENNPRGASILSMTAQDPDSGDNARITYSL 491
Query: 491 LPPQDLHLPLASLVSINTDNGHLFALRSLDYEALQAFDFRVGATDRGSPALSSEALVRVL 550
PL+S VSIN++ G L+AL S DYE + + A+D G P LSS + +
Sbjct: 492 AEDTFQGAPLSSYVSINSNTGILYALCSFDYEQFRDLQLLMTASDSGDPPLSSNVSLSLF 551
Query: 551 VLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 609
VLD NDN P +LYP + EL PR+A+ GYLVTKVVAVD DSGQNAWLSY LLK+
Sbjct: 552 VLDQNDNVPEILYPTFPTDGSTGVELAPRSADSGYLVTKVVAVDRDSGQNAWLSYSLLKS 611
Query: 610 TEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLQVLLVDGFSQP 669
+EPGLF V H GEVRTAR L +RDA K RLVV+V+D+G+PP SAT TL V + D
Sbjct: 612 SEPGLFAVGLHTGEVRTARALLDRDALKQRLVVVVQDHGQPPLSATVTLTVAVADSIPDV 671
Query: 670 YLPLPEAAPAQAQADS-LTVYLVVALASVSSLFLFSVLLFVAVRLCR--RSRAASVGSCS 726
L P+ DS LT+YLVVA+A+VS +FL V + +A++L R +SR
Sbjct: 672 LADLGSLKPSADPDDSGLTLYLVVAVAAVSCVFLAFVTVLLALKLRRWHKSRLLHAEGSR 731
Query: 727 VPKGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSETNEFKFLKP 769
+ P H V V G Q+Y +EV LT S + F +P
Sbjct: 732 LAGVP-ASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFSQP 773
>gi|11056026 protocadherin gamma subfamily A, 4 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 631 bits (1627), Expect = 0.0
Identities = 344/763 (45%), Positives = 483/763 (63%), Gaps = 7/763 (0%)
Query: 13 QVLLLFVLLG-MSQAGSETWSFSVAEEMQSGSFVGNLAKDLGLKVRELSSRGARVVSNDK 71
++L + +LLG + + +E +SV EE + GS VGN+AKDLGL REL+ RG R+VS +
Sbjct: 12 RLLQICLLLGVLVEIRAEQILYSVFEEQEEGSVVGNIAKDLGLAPRELAERGVRIVSRGR 71
Query: 72 KQRLQLDINTGDLLLSETLDREELCGSIEPCVLHLQVLMQNPTQFLQIELQVRDINDHSP 131
Q L+ +G L+ + +DREELC CV +L++L+++ + L++E+++ D+ND+ P
Sbjct: 72 TQLFALNPRSGTLVTAGRIDREELCDRSPNCVTNLEILLEDTVKILRVEVEIIDVNDNPP 131
Query: 132 IFSEKQMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTISPNSHFHIKMRVIPDNRKY 191
F +Q +++ EN GA F L A D DVG+N+++ Y ++ N +F + ++ D KY
Sbjct: 132 SFGTEQREIKVAENENPGARFPLPEAFDPDVGVNSLQGYQLNSNGYFSLDVQSGADGIKY 191
Query: 192 PELVLDKALDYEELPELSFILSALDGGSPPRSGTALVRVVVVDINDNSPEFEQAFYEVKI 251
PELVL++ALD EE +L+A DGG P RSGTA + +++VD NDN+P F Q Y V +
Sbjct: 192 PELVLERALDREEEAVHHLVLTAFDGGDPVRSGTARILIILVDTNDNAPVFTQPEYHVSV 251
Query: 252 RENSILGSLILIVSAWDLDSGTNGEICYTFSHASEDIRKTFEINQKSGEITLRAPLDFET 311
REN +G+ +L V A D D G NG++ Y+F + I + F++N SG+IT+ LD+E
Sbjct: 252 RENVPVGTRLLTVKATDPDEGANGDVTYSFRKVRDKISQLFQLNSLSGDITILGGLDYED 311
Query: 312 IESYSIIIQATDGGGLFGKSTVIIHVIDVNDNAPEITVSSITSPIPE-NTPETVVMVFSI 370
Y I ++A DG GL +S V++ V+D NDNAPE+TV+S+TS + E ++P TV+ +F++
Sbjct: 312 SGFYDIDVEAHDGPGLRARSKVLVTVLDENDNAPEVTVTSLTSSVQESSSPGTVIALFNV 371
Query: 371 QDIDSGDNGRIVCSIPEDLPFVLKSSVENYYTLETERPLDRESTAEYNITITVTDLGIPR 430
D DSG NG + CSIP++LPF L+ + NYY L T R LDRE +EYNIT+T TD G P
Sbjct: 372 HDSDSGGNGLVTCSIPDNLPFTLEKTYGNYYRLLTHRTLDREEVSEYNITVTATDQGTPP 431
Query: 431 LKTEHNTTVLVSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVNYSL 490
L TE + ++ V D+NDN PTF SY+ ++ ENN I S++A D DSG NA++ YSL
Sbjct: 432 LSTETHISLQVMDINDNPPTFPHASYSAYIPENNPRGASILSMTAQDPDSGDNARITYSL 491
Query: 491 LPPQDLHLPLASLVSINTDNGHLFALRSLDYEALQAFDFRVGATDRGSPALSSEALVRVL 550
PL+S VSIN++ G L+AL S DYE + + A+D G P LSS + +
Sbjct: 492 AEDTFQGAPLSSYVSINSNTGILYALCSFDYEQFRDLQLLMTASDSGDPPLSSNVSLSLF 551
Query: 551 VLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 609
VLD NDN P +LYP + EL PR+A+ GYLVTKVVAVD DSGQNAWLSY LLK+
Sbjct: 552 VLDQNDNVPEILYPTFPTDGSTGVELAPRSADSGYLVTKVVAVDRDSGQNAWLSYSLLKS 611
Query: 610 TEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLQVLLVDGFSQP 669
+EPGLF V H GEVRTAR L +RDA K RLVV+V+D+G+PP SAT TL V + D
Sbjct: 612 SEPGLFAVGLHTGEVRTARALLDRDALKQRLVVVVQDHGQPPLSATVTLTVAVADSIPDV 671
Query: 670 YLPLPEAAPAQAQADS-LTVYLVVALASVSSLFLFSVLLFVAVRLCR--RSRAASVGSCS 726
L P+ DS LT+YLVVA+A+VS +FL V + +A++L R +SR
Sbjct: 672 LADLGSLKPSADPDDSGLTLYLVVAVAAVSCVFLAFVTVLLALKLRRWHKSRLLHAEGSR 731
Query: 727 VPKGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSETNEFKFLKP 769
+ P H V V G Q+Y +EV LT S + F +P
Sbjct: 732 LAGVP-ASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFSQP 773
>gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 622 bits (1605), Expect = e-178
Identities = 352/773 (45%), Positives = 482/773 (62%), Gaps = 13/773 (1%)
Query: 6 TRTQQIRQVLLLFVLLGMS-QAGSETWSFSVAEEMQSGSFVGNLAKDLGLKVRELSSRGA 64
T+ Q +++LL LLGM +A + +SV EE + G VGN++KDL L+ REL+ R
Sbjct: 5 TKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRV 64
Query: 65 RVVSNDKKQRLQLDINTGDLLLSETLDREELCGSIEPCVLHLQVLMQNPTQFLQIELQVR 124
R+VS + Q L+ +G L+ + +DREELC C+++ +VL+++ + IE++V
Sbjct: 65 RIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVT 124
Query: 125 DINDHSPIFSEKQMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTISPNSHFHIKMRV 184
DIND +P F + + ++I E + GA + L A D DVG+N+++SY +SPN HF + ++
Sbjct: 125 DINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQT 184
Query: 185 IPDNRKYPELVLDKALDYEELPELSFILSALDGGSPPRSGTALVRVVVVDINDNSPEFEQ 244
+ PELVL++ALD EE +L+A DGG P RS T + V V+D NDN+P F Q
Sbjct: 185 GDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQ 244
Query: 245 AFYEVKIRENSILGSLILIVSAWDLDSGTNGEICYTFSHASEDIRKTFEINQKSGEITLR 304
Y VK+ EN G+ +L +A DLD G NG++ Y F +E F++N+ +GEI+
Sbjct: 245 RIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTA 304
Query: 305 APLDFETIESYSIIIQATDGGGLFGKSTVIIHVIDVNDNAPEITVSSITSPIPENTPE-T 363
LD+E Y + IQA DGGGL G + V+I V DVNDN PE+T++S+ SP+ E+ P+ T
Sbjct: 305 KSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGT 364
Query: 364 VVMVFSIQDIDSGDNGRIVCSIPEDLPFVLKSSVENYYTLETERPLDRESTAEYNITITV 423
V+++F+ D DSG NG++VCSI E+L F L++S E+YY L T + LDRE +EYNIT+T
Sbjct: 365 VILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTA 424
Query: 424 TDLGIPRLKTEHNTTVLVSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTN 483
TD G P L TE + T+ V+D+NDN P F+Q SY++++ ENN+ I SV A D DS N
Sbjct: 425 TDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNEN 484
Query: 484 AQVNYSLLPPQDLHLPLASLVSINTDNGHLFALRSLDYEALQAFDFRVGATDRGSPALSS 543
++V YSL PL++ VSIN+D G L+AL S DYE + +V A+D GSP LSS
Sbjct: 485 SRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSS 544
Query: 544 EALVRVLVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWL 602
+R+ VLD NDN+P +LYP L + EL PR+AEPGYLVTKVVAVD DSGQNAWL
Sbjct: 545 NVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWL 604
Query: 603 SYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLQVLL 662
SY+L KA+EPGLF V H GEVRTAR L +RDA K LVV V+D+G+PP SAT TL V +
Sbjct: 605 SYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAI 664
Query: 663 VDGFSQPYLPLPE-AAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRL-----CRR 716
D L PA +A LT+YLVVA+A VS +FL V+ +A+RL
Sbjct: 665 ADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHL 724
Query: 717 SRAASVGSCSVPKGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSETNEFKFLKP 769
RA S G VP H V V G Q+Y E LT S + F +P
Sbjct: 725 LRATSDGLAGVP----TSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQP 773
>gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precursor
[Homo sapiens]
Length = 828
Score = 622 bits (1605), Expect = e-178
Identities = 352/773 (45%), Positives = 482/773 (62%), Gaps = 13/773 (1%)
Query: 6 TRTQQIRQVLLLFVLLGMS-QAGSETWSFSVAEEMQSGSFVGNLAKDLGLKVRELSSRGA 64
T+ Q +++LL LLGM +A + +SV EE + G VGN++KDL L+ REL+ R
Sbjct: 5 TKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRV 64
Query: 65 RVVSNDKKQRLQLDINTGDLLLSETLDREELCGSIEPCVLHLQVLMQNPTQFLQIELQVR 124
R+VS + Q L+ +G L+ + +DREELC C+++ +VL+++ + IE++V
Sbjct: 65 RIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVT 124
Query: 125 DINDHSPIFSEKQMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTISPNSHFHIKMRV 184
DIND +P F + + ++I E + GA + L A D DVG+N+++SY +SPN HF + ++
Sbjct: 125 DINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQT 184
Query: 185 IPDNRKYPELVLDKALDYEELPELSFILSALDGGSPPRSGTALVRVVVVDINDNSPEFEQ 244
+ PELVL++ALD EE +L+A DGG P RS T + V V+D NDN+P F Q
Sbjct: 185 GDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQ 244
Query: 245 AFYEVKIRENSILGSLILIVSAWDLDSGTNGEICYTFSHASEDIRKTFEINQKSGEITLR 304
Y VK+ EN G+ +L +A DLD G NG++ Y F +E F++N+ +GEI+
Sbjct: 245 RIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTA 304
Query: 305 APLDFETIESYSIIIQATDGGGLFGKSTVIIHVIDVNDNAPEITVSSITSPIPENTPE-T 363
LD+E Y + IQA DGGGL G + V+I V DVNDN PE+T++S+ SP+ E+ P+ T
Sbjct: 305 KSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGT 364
Query: 364 VVMVFSIQDIDSGDNGRIVCSIPEDLPFVLKSSVENYYTLETERPLDRESTAEYNITITV 423
V+++F+ D DSG NG++VCSI E+L F L++S E+YY L T + LDRE +EYNIT+T
Sbjct: 365 VILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTA 424
Query: 424 TDLGIPRLKTEHNTTVLVSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTN 483
TD G P L TE + T+ V+D+NDN P F+Q SY++++ ENN+ I SV A D DS N
Sbjct: 425 TDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNEN 484
Query: 484 AQVNYSLLPPQDLHLPLASLVSINTDNGHLFALRSLDYEALQAFDFRVGATDRGSPALSS 543
++V YSL PL++ VSIN+D G L+AL S DYE + +V A+D GSP LSS
Sbjct: 485 SRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSS 544
Query: 544 EALVRVLVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWL 602
+R+ VLD NDN+P +LYP L + EL PR+AEPGYLVTKVVAVD DSGQNAWL
Sbjct: 545 NVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWL 604
Query: 603 SYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLQVLL 662
SY+L KA+EPGLF V H GEVRTAR L +RDA K LVV V+D+G+PP SAT TL V +
Sbjct: 605 SYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAI 664
Query: 663 VDGFSQPYLPLPE-AAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRL-----CRR 716
D L PA +A LT+YLVVA+A VS +FL V+ +A+RL
Sbjct: 665 ADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHL 724
Query: 717 SRAASVGSCSVPKGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSETNEFKFLKP 769
RA S G VP H V V G Q+Y E LT S + F +P
Sbjct: 725 LRATSDGLAGVP----TSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQP 773
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.134 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,443,053
Number of Sequences: 37866
Number of extensions: 1331654
Number of successful extensions: 10238
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 196
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 2967
Number of HSP's gapped (non-prelim): 685
length of query: 797
length of database: 18,247,518
effective HSP length: 110
effective length of query: 687
effective length of database: 14,082,258
effective search space: 9674511246
effective search space used: 9674511246
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.