Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ABHD10 Sequence: fasta or formatted (306aa) NCBI GI: 8923001
Description:

abhydrolase domain containing 10

Referenced in:

Additional Enzymes and Related Sequences

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.5         26           2
 C cysteine            2.0          6           1
 D aspartate           5.9         18           2
 E glutamate           4.2         13           2
 F phenylalanine       2.3          7           1
 G glycine             6.5         20           2
 H histidine           3.3         10           2
 I isoleucine          6.5         20           2
 K lysine              6.5         20           2
 L leucine            11.1         34           2
 M methionine          2.6          8           1
 N asparagine          2.6          8           1
 P proline             5.9         18           1
 Q glutamine           2.3          7           1
 R arginine            5.2         16           1
 S serine              7.8         24           2
 T threonine           3.3         10           1
 V valine              8.2         25           2
 W tryptophan          2.6          8           1
 Y tyrosine            2.6          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   abhydrolase domain containing 10 
ABHD11                0.027   abhydrolase domain containing 11 isoform 1 
ABHD12                0.023   abhydrolase domain containing 12 isoform a 
ABHD12                0.023   abhydrolase domain containing 12 isoform b 
ABHD11                0.017   abhydrolase domain containing 11 isoform 2 
BPHL                  0.015   biphenyl hydrolase-like 
EPHX2                 0.015   epoxide hydrolase 2, cytoplasmic 
ABHD13                0.012   abhydrolase domain containing 13 
ABHD11                0.012   abhydrolase domain containing 11 isoform 8 
MGLL                  0.010   monoglyceride lipase isoform 1 
EPHX4                 0.010   abhydrolase domain containing 7 
GALNTL4               0.008   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ac...
MGLL                  0.008   monoglyceride lipase isoform 2 
ABHD3                 0.008   alpha/beta hydrolase domain containing protein 3 [Ho...
STAB1                 0.008   stabilin 1 precursor 
ABHD14B               0.007   abhydrolase domain containing 14B 
ABHD14B               0.007   abhydrolase domain containing 14B 
RBBP9                 0.007   retinoblastoma binding protein 9 
SH2D2A                0.007   SH2 domain protein 2A isoform 4 
SH2D2A                0.007   SH2 domain protein 2A isoform 3 
SH2D2A                0.007   SH2 domain protein 2A isoform 1 
SH2D2A                0.007   SH2 domain protein 2A isoform 2 
SH2D2A                0.007   SH2 domain protein 2A isoform 2 
ABHD8                 0.007   abhydrolase domain containing 8 
GTF2IRD1              0.005   GTF2I repeat domain containing 1 isoform 1 
GTF2IRD1              0.005   GTF2I repeat domain containing 1 isoform 2 
ABHD12B               0.005   abhydrolase domain containing 12B isoform c 
ABHD12B               0.005   abhydrolase domain containing 12B isoform b 
ANKRD29               0.005   ankyrin repeat domain 29 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press