Guide to the Human Genome
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Search of human proteins with 88900493

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|88900493 zinc finger, DHHC domain containing 19 [Homo
sapiens]
         (309 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|88900493 zinc finger, DHHC domain containing 19 [Homo sapiens]     661   0.0  
gi|32698692 zinc finger, DHHC domain containing 8 [Homo sapiens]      152   4e-37
gi|41152072 zinc finger, DHHC domain containing 5 [Homo sapiens]      132   4e-31
gi|24371241 zinc finger, DHHC-type containing 14 isoform 1 [Homo...   128   7e-30
gi|24371272 zinc finger, DHHC-type containing 14 isoform 2 [Homo...   128   7e-30
gi|45433499 zinc finger, DHHC-type containing 18 [Homo sapiens]       119   3e-27
gi|56682974 zinc finger, DHHC domain containing 9 [Homo sapiens]      114   1e-25
gi|56682972 zinc finger, DHHC domain containing 9 [Homo sapiens]      114   1e-25
gi|224493956 zinc finger, DHHC-type containing 7 isoform 2 [Homo...    90   3e-18
gi|206597479 zinc finger, DHHC-type containing 3 isoform 3 [Homo...    84   1e-16
gi|206597477 zinc finger, DHHC-type containing 3 isoform 1 [Homo...    84   2e-16
gi|7706133 zinc finger, DHHC-type containing 3 isoform 2 [Homo s...    84   2e-16
gi|224493964 zinc finger, DHHC-type containing 7 isoform 1 [Homo...    82   6e-16
gi|49457851 zinc finger, DHHC-type containing 20 [Homo sapiens]        80   2e-15
gi|37594451 Abl-philin 2 isoform 2 [Homo sapiens]                      79   5e-15
gi|37594447 Abl-philin 2 isoform 4 [Homo sapiens]                      79   5e-15
gi|7705949 zinc finger, DHHC-type containing 2 [Homo sapiens]          78   1e-14
gi|24307963 zinc finger, DHHC-type containing 1 [Homo sapiens]         76   3e-14
gi|197304690 zinc finger, DHHC-type containing 4 [Homo sapiens]        76   4e-14
gi|197304688 zinc finger, DHHC-type containing 4 [Homo sapiens]        76   4e-14
gi|197304686 zinc finger, DHHC-type containing 4 [Homo sapiens]        76   4e-14
gi|8922448 zinc finger, DHHC-type containing 4 [Homo sapiens]          76   4e-14
gi|226342941 zinc finger, DHHC-type containing 15 isoform 2 [Hom...    73   3e-13
gi|21450653 zinc finger, DHHC-type containing 15 isoform 1 [Homo...    73   3e-13
gi|37594449 Abl-philin 2 isoform 1 [Homo sapiens]                      73   4e-13
gi|37594455 Abl-philin 2 isoform 1 [Homo sapiens]                      73   4e-13
gi|21361910 zinc finger, DHHC domain containing 12 [Homo sapiens]      72   6e-13
gi|103471993 huntingtin interacting protein 14 [Homo sapiens]          72   8e-13
gi|47933348 zinc finger, DHHC domain containing 13 isoform 2 [Ho...    71   1e-12
gi|47933346 zinc finger, DHHC domain containing 13 isoform 1 [Ho...    71   1e-12

>gi|88900493 zinc finger, DHHC domain containing 19 [Homo sapiens]
          Length = 309

 Score =  661 bits (1706), Expect = 0.0
 Identities = 309/309 (100%), Positives = 309/309 (100%)

Query: 1   MTLLTDATPLVKEPHPLPLVPRPWFLPSLFAAFNVVLLVFFSGLFFAFPCRWLAQNGEWA 60
           MTLLTDATPLVKEPHPLPLVPRPWFLPSLFAAFNVVLLVFFSGLFFAFPCRWLAQNGEWA
Sbjct: 1   MTLLTDATPLVKEPHPLPLVPRPWFLPSLFAAFNVVLLVFFSGLFFAFPCRWLAQNGEWA 60

Query: 61  FPVITGSLFVLTFFSLVSLNFSDPGILHQGSAEQGPLTVHVVWVNHGAFRLQWCPKCCFH 120
           FPVITGSLFVLTFFSLVSLNFSDPGILHQGSAEQGPLTVHVVWVNHGAFRLQWCPKCCFH
Sbjct: 61  FPVITGSLFVLTFFSLVSLNFSDPGILHQGSAEQGPLTVHVVWVNHGAFRLQWCPKCCFH 120

Query: 121 RPPRTYHCPWCNICVEDFDHHCKWVNNCIGHRNFRFFMLLVLSLCLYSGAMLVTCLIFLV 180
           RPPRTYHCPWCNICVEDFDHHCKWVNNCIGHRNFRFFMLLVLSLCLYSGAMLVTCLIFLV
Sbjct: 121 RPPRTYHCPWCNICVEDFDHHCKWVNNCIGHRNFRFFMLLVLSLCLYSGAMLVTCLIFLV 180

Query: 181 RTTHLPFSTDKAIAIVVAVSAAGLLVPLSLLLLIQALSVSSADRTYKGKCRHLQGYNPFD 240
           RTTHLPFSTDKAIAIVVAVSAAGLLVPLSLLLLIQALSVSSADRTYKGKCRHLQGYNPFD
Sbjct: 181 RTTHLPFSTDKAIAIVVAVSAAGLLVPLSLLLLIQALSVSSADRTYKGKCRHLQGYNPFD 240

Query: 241 QGCASNWYLTICAPLGPKYMAEAVQLQRVVGPDWTSMPNLHPPMSPSALNPPAPTSGSLQ 300
           QGCASNWYLTICAPLGPKYMAEAVQLQRVVGPDWTSMPNLHPPMSPSALNPPAPTSGSLQ
Sbjct: 241 QGCASNWYLTICAPLGPKYMAEAVQLQRVVGPDWTSMPNLHPPMSPSALNPPAPTSGSLQ 300

Query: 301 SREGTPGAW 309
           SREGTPGAW
Sbjct: 301 SREGTPGAW 309


>gi|32698692 zinc finger, DHHC domain containing 8 [Homo sapiens]
          Length = 765

 Score =  152 bits (384), Expect = 4e-37
 Identities = 96/281 (34%), Positives = 137/281 (48%), Gaps = 25/281 (8%)

Query: 25  FLPSLFAAFNVVLLVFFSGLFFAFPCRWLAQNGEWAFPVITGSLFVLTFFSLVSLNFSDP 84
           ++P   AA    LLV  S LFF F C WL +    A PV  G +F+    +     F DP
Sbjct: 14  YIPVATAA---ALLVGSSTLFFVFTCPWLTRAVSPAVPVYNGIIFLFVLANFSMATFMDP 70

Query: 85  GILHQGSAEQ-------GPLTVHVVWVNHGAFRLQWCPKCCFHRPPRTYHCPWCNICVED 137
           G+  +   ++        PL  +V  V     R++WC  C F+RPPR  HC  C+ CVED
Sbjct: 71  GVFPRADEDEDKEDDFRAPLYKNVD-VRGIQVRMKWCATCHFYRPPRCSHCSVCDNCVED 129

Query: 138 FDHHCKWVNNCIGHRNFRFFMLLVLSLCLYSGAMLVTCLIFLVRTTHLPFSTDKAIAIVV 197
           FDHHC WVNNCIG RN+R+F L +LSL  +   ++   L++++       +    I + V
Sbjct: 130 FDHHCPWVNNCIGRRNYRYFFLFLLSLSAHMVGVVAFGLVYVLNHAEGLGAAHTTITMAV 189

Query: 198 AVSAAGLLVPLSLLLLIQALSVSSADRTYK---GKCRHLQGYNPFDQGCASNWYLTICAP 254
              A    +P+  L     + V+    T +   GK R   G NPF +GC  N    +C+P
Sbjct: 190 MCVAGLFFIPVIGLTGFHVVLVTRGRTTNEQVTGKFR--GGVNPFTRGCCGNVEHVLCSP 247

Query: 255 LGPKYMAEAVQLQRVVGPDWTSMPNLHPP-MSPSALNPPAP 294
           L P+Y+ E  +L   V        +L PP + P  L+  AP
Sbjct: 248 LAPRYVVEPPRLPLAV--------SLKPPFLRPELLDRAAP 280


>gi|41152072 zinc finger, DHHC domain containing 5 [Homo sapiens]
          Length = 715

 Score =  132 bits (332), Expect = 4e-31
 Identities = 81/260 (31%), Positives = 125/260 (48%), Gaps = 19/260 (7%)

Query: 25  FLPSLFAAFNV--VLLVFFSGLFFAFPCRWLAQNGEWAFPVITGSLFVLTFFSLVSLNFS 82
           F PS +   +   + LV  + LFFAF C  L+     A P+    +F+    +     F 
Sbjct: 9   FKPSKYVPVSAAAIFLVGATTLFFAFTCPGLSLYVSPAVPIYNAIMFLFVLANFSMATFM 68

Query: 83  DPGILHQGSAEQ-------GPL--TVHVVWVNHGAFRLQWCPKCCFHRPPRTYHCPWCNI 133
           DPGI  +   ++        PL  TV +  +     R++WC  C F+RPPR  HC  C+ 
Sbjct: 69  DPGIFPRAEEDEDKEDDFRAPLYKTVEIKGIQ---VRMKWCATCRFYRPPRCSHCSVCDN 125

Query: 134 CVEDFDHHCKWVNNCIGHRNFRFFMLLVLSLCLYSGAMLVTCLIFLVRTTHLPFSTDKAI 193
           CVE+FDHHC WVNNCIG RN+R+F L +LSL  +   +    L++++           A+
Sbjct: 126 CVEEFDHHCPWVNNCIGRRNYRYFFLFLLSLTAHIMGVFGFGLLYVLYHIEELSGVRTAV 185

Query: 194 AIVVAVSAAGLLVPLSLLLLIQALSVSSADRTYK---GKCRHLQGYNPFDQGCASNWYLT 250
            + V   A    +P++ L     + V+    T +   GK R   G NPF  GC +N    
Sbjct: 186 TMAVMCVAGLFFIPVAGLTGFHVVLVARGRTTNEQVTGKFR--GGVNPFTNGCCNNVSRV 243

Query: 251 ICAPLGPKYMAEAVQLQRVV 270
           +C+   P+Y+    + + +V
Sbjct: 244 LCSSPAPRYLGRPKKEKTIV 263


>gi|24371241 zinc finger, DHHC-type containing 14 isoform 1 [Homo
           sapiens]
          Length = 488

 Score =  128 bits (321), Expect = 7e-30
 Identities = 87/285 (30%), Positives = 132/285 (46%), Gaps = 43/285 (15%)

Query: 35  VVLLVFFSGLFFAFPCRWLAQNGEWAFPVITGSLFVLTFFSLVSLNFSDPGILHQGSAEQ 94
           +VL++  SGLFFAF C +LA     A P + G LF     +L+  +FSDPG+L + + ++
Sbjct: 68  LVLILVTSGLFFAFDCPYLAVKITPAIPAVAGILFFFVMGTLLRTSFSDPGVLPRATPDE 127

Query: 95  G---------------------PLTVHVVWVNHGAFRLQWCPKCCFHRPPRTYHCPWCNI 133
                                 P T  V+ +N    +L++C  C   RPPR  HC  C+ 
Sbjct: 128 AADLERQIDIANGTSSGGYRPPPRTKEVI-INGQTVKLKYCFTCKIFRPPRASHCSLCDN 186

Query: 134 CVEDFDHHCKWVNNCIGHRNFRFFMLLVLS---LCLYSGAMLVTCLIFLVRTT----HLP 186
           CVE FDHHC WV NC+G RN+RFF + +LS   L ++  A ++T +I   + T     L 
Sbjct: 187 CVERFDHHCPWVGNCVGKRNYRFFYMFILSLSFLTVFIFAFVITHVILRSQQTGFLNALK 246

Query: 187 FSTDKAIAIVVAVSAAGLLVPLSLLLLIQALSVSSADRTYKGKCRHLQG---YNPFDQG- 242
            S    +  VV   +   +V LS        S  + +   KG   + +G   YNP+  G 
Sbjct: 247 DSPASVLEAVVCFFSVWSIVGLSGFHTYLISSNQTTNEDIKGSWSNKRGKENYNPYSYGN 306

Query: 243 CASNWYLTICAPLGPKYMAEAVQLQRVVGPDWTSMPNLHPPMSPS 287
             +N  + +C P+ P  +     +Q          P+   P +PS
Sbjct: 307 IFTNCCVALCGPISPSLIDRRGYIQ----------PDTPQPAAPS 341


>gi|24371272 zinc finger, DHHC-type containing 14 isoform 2 [Homo
           sapiens]
          Length = 473

 Score =  128 bits (321), Expect = 7e-30
 Identities = 87/285 (30%), Positives = 132/285 (46%), Gaps = 43/285 (15%)

Query: 35  VVLLVFFSGLFFAFPCRWLAQNGEWAFPVITGSLFVLTFFSLVSLNFSDPGILHQGSAEQ 94
           +VL++  SGLFFAF C +LA     A P + G LF     +L+  +FSDPG+L + + ++
Sbjct: 68  LVLILVTSGLFFAFDCPYLAVKITPAIPAVAGILFFFVMGTLLRTSFSDPGVLPRATPDE 127

Query: 95  G---------------------PLTVHVVWVNHGAFRLQWCPKCCFHRPPRTYHCPWCNI 133
                                 P T  V+ +N    +L++C  C   RPPR  HC  C+ 
Sbjct: 128 AADLERQIDIANGTSSGGYRPPPRTKEVI-INGQTVKLKYCFTCKIFRPPRASHCSLCDN 186

Query: 134 CVEDFDHHCKWVNNCIGHRNFRFFMLLVLS---LCLYSGAMLVTCLIFLVRTT----HLP 186
           CVE FDHHC WV NC+G RN+RFF + +LS   L ++  A ++T +I   + T     L 
Sbjct: 187 CVERFDHHCPWVGNCVGKRNYRFFYMFILSLSFLTVFIFAFVITHVILRSQQTGFLNALK 246

Query: 187 FSTDKAIAIVVAVSAAGLLVPLSLLLLIQALSVSSADRTYKGKCRHLQG---YNPFDQG- 242
            S    +  VV   +   +V LS        S  + +   KG   + +G   YNP+  G 
Sbjct: 247 DSPASVLEAVVCFFSVWSIVGLSGFHTYLISSNQTTNEDIKGSWSNKRGKENYNPYSYGN 306

Query: 243 CASNWYLTICAPLGPKYMAEAVQLQRVVGPDWTSMPNLHPPMSPS 287
             +N  + +C P+ P  +     +Q          P+   P +PS
Sbjct: 307 IFTNCCVALCGPISPSLIDRRGYIQ----------PDTPQPAAPS 341


>gi|45433499 zinc finger, DHHC-type containing 18 [Homo sapiens]
          Length = 388

 Score =  119 bits (298), Expect = 3e-27
 Identities = 78/261 (29%), Positives = 113/261 (43%), Gaps = 41/261 (15%)

Query: 32  AFNVVLLVFFSGLFFAFPCRWLAQNGEWAFPVITGSLFVLTFFSLVSLNFSDPGILHQG- 90
           A  ++L++  +GLFF F C +LA+    A P+I   LF      L+  +F+DPGIL +  
Sbjct: 95  ALTLLLILTTTGLFFVFDCPYLARKLTLAIPIIAAILFFFVMSCLLQTSFTDPGILPRAT 154

Query: 91  ----------------SAEQGPLTVHVVWVNHGAFRLQWCPKCCFHRPPRTYHCPWCNIC 134
                           S  + P     V +N    +L++C  C   RPPRT HC  C+ C
Sbjct: 155 VCEAAALEKQIDNTGSSTYRPPPRTREVLINGQMVKLKYCFTCKMFRPPRTSHCSVCDNC 214

Query: 135 VEDFDHHCKWVNNCIGHRNFRFFMLLVLSLCLYSGAMLVTCLIFLVRTTHLPFSTD---- 190
           VE FDHHC WV NC+G RN+RFF   +LSL        +T  IF    THL         
Sbjct: 215 VERFDHHCPWVGNCVGRRNYRFFYAFILSL------SFLTAFIFACVVTHLTLRAQGSNF 268

Query: 191 ---------KAIAIVVAVSAAGLLVPLSLLLLIQALSVSSADRTYKGKCRHLQG----YN 237
                      + +V+   +   ++ LS        S  + +   KG     +G     N
Sbjct: 269 LSTLKETPASVLELVICFFSIWSILGLSGFHTYLVASNLTTNEDIKGSWSSKRGGEASVN 328

Query: 238 PFD-QGCASNWYLTICAPLGP 257
           P+  +   +N    +C PL P
Sbjct: 329 PYSHKSIITNCCAVLCGPLPP 349


>gi|56682974 zinc finger, DHHC domain containing 9 [Homo sapiens]
          Length = 364

 Score =  114 bits (285), Expect = 1e-25
 Identities = 74/249 (29%), Positives = 115/249 (46%), Gaps = 35/249 (14%)

Query: 44  LFFAFPCRWLAQNGEWAFPVITGSLFVLTFFSLVSLNFSDPGILHQ-------------- 89
           LFFAF CR+LA     A PV    LF+ +  +L+  +FSDPG++ +              
Sbjct: 51  LFFAFECRYLAVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIE 110

Query: 90  ---GSAEQG---PLTVHVVWVNHGAFRLQWCPKCCFHRPPRTYHCPWCNICVEDFDHHCK 143
              G+  QG   P  +    +N+   +L++C  C   RPPR  HC  C+ CVE FDHHC 
Sbjct: 111 ATNGAVPQGQRPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCP 170

Query: 144 WVNNCIGHRNFRFFMLLVLSLCLYSGAMLVTCLIFL-VRTTHLPF----------STDKA 192
           WV NC+G RN+R+F L +LSL L +  +    ++++ +++  + F            +  
Sbjct: 171 WVGNCVGKRNYRYFYLFILSLSLLTIYVFAFNIVYVALKSLKIGFLETLKETPGTVLEVL 230

Query: 193 IAIVVAVSAAGLLVPLSLLLLIQALSVSSADRTYKGKCRHLQGYNPFDQG-CASNWYLTI 251
           I      S  GL    + L+ +   +      ++ GK R     NP+  G    N    +
Sbjct: 231 ICFFTLWSVVGLTGFHTFLVALNQTTNEDIKGSWTGKNR---VQNPYSHGNIVKNCCEVL 287

Query: 252 CAPLGPKYM 260
           C PL P  +
Sbjct: 288 CGPLPPSVL 296


>gi|56682972 zinc finger, DHHC domain containing 9 [Homo sapiens]
          Length = 364

 Score =  114 bits (285), Expect = 1e-25
 Identities = 74/249 (29%), Positives = 115/249 (46%), Gaps = 35/249 (14%)

Query: 44  LFFAFPCRWLAQNGEWAFPVITGSLFVLTFFSLVSLNFSDPGILHQ-------------- 89
           LFFAF CR+LA     A PV    LF+ +  +L+  +FSDPG++ +              
Sbjct: 51  LFFAFECRYLAVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIE 110

Query: 90  ---GSAEQG---PLTVHVVWVNHGAFRLQWCPKCCFHRPPRTYHCPWCNICVEDFDHHCK 143
              G+  QG   P  +    +N+   +L++C  C   RPPR  HC  C+ CVE FDHHC 
Sbjct: 111 ATNGAVPQGQRPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCP 170

Query: 144 WVNNCIGHRNFRFFMLLVLSLCLYSGAMLVTCLIFL-VRTTHLPF----------STDKA 192
           WV NC+G RN+R+F L +LSL L +  +    ++++ +++  + F            +  
Sbjct: 171 WVGNCVGKRNYRYFYLFILSLSLLTIYVFAFNIVYVALKSLKIGFLETLKETPGTVLEVL 230

Query: 193 IAIVVAVSAAGLLVPLSLLLLIQALSVSSADRTYKGKCRHLQGYNPFDQG-CASNWYLTI 251
           I      S  GL    + L+ +   +      ++ GK R     NP+  G    N    +
Sbjct: 231 ICFFTLWSVVGLTGFHTFLVALNQTTNEDIKGSWTGKNR---VQNPYSHGNIVKNCCEVL 287

Query: 252 CAPLGPKYM 260
           C PL P  +
Sbjct: 288 CGPLPPSVL 296


>gi|224493956 zinc finger, DHHC-type containing 7 isoform 2 [Homo
           sapiens]
          Length = 308

 Score = 89.7 bits (221), Expect = 3e-18
 Identities = 59/197 (29%), Positives = 93/197 (47%), Gaps = 18/197 (9%)

Query: 22  RPWFLPS---LFAAFNVVLLVFFSGLFFAFPCRWLAQNGEWAFPVITGSLF----VLTFF 74
           R WF+     +  A    LLV ++     F    L  + ++ + V+ G +F    VL   
Sbjct: 38  RVWFIRDGCGMICAVMTWLLVAYADFVVTFVM--LLPSKDFWYSVVNGVIFNCLAVLALS 95

Query: 75  SLVSLNFSDPGILHQGSAEQGPLTVHVVWVNHGAFRLQWCPKCCFHRPPRTYHCPWCNIC 134
           S +    +DPG + +G+A +  +    +      ++   CPKCC  +P R +HC  C  C
Sbjct: 96  SHLRTMLTDPGAVPKGNATKEYMESLQLKPGEVIYK---CPKCCCIKPERAHHCSICKRC 152

Query: 135 VEDFDHHCKWVNNCIGHRNFRFFMLLVLSLCLYSGAMLVTC---LIFLVR---TTHLPFS 188
           +   DHHC WVNNC+G +N RFF+L  + + L S   L+ C    I  VR   T    FS
Sbjct: 153 IRKMDHHCPWVNNCVGEKNQRFFVLFTMYIALSSVHALILCGFQFISCVRGQWTECSDFS 212

Query: 189 TDKAIAIVVAVSAAGLL 205
               + +++ +   GLL
Sbjct: 213 PPITVILLIFLCLEGLL 229


>gi|206597479 zinc finger, DHHC-type containing 3 isoform 3 [Homo
           sapiens]
          Length = 329

 Score = 84.3 bits (207), Expect = 1e-16
 Identities = 69/286 (24%), Positives = 125/286 (43%), Gaps = 35/286 (12%)

Query: 11  VKEPHPLPLVPRPWFLPS---LFAAFNVVLLVFFSGLFFAFPCRWLAQNGEWAFPVITGS 67
           V  P+P P V   WF+     +  A     LV ++     F    L  + ++ + +I G 
Sbjct: 25  VPPPYPGP-VGTMWFIRDGCGIACAIVTWFLVLYAEFVVLFVM--LIPSRDYVYSIINGI 81

Query: 68  LF-VLTFFSLVS---LNFSDPGILHQGSAEQGPLTVHVVWVNHGAFRLQWCPKCCFHRPP 123
           +F +L F +L S      +DPG + +G+A +  +    +      ++   CPKCC  +P 
Sbjct: 82  VFNLLAFLALASHCRAMLTDPGAVPKGNATKEFIESLQLKPGQVVYK---CPKCCSIKPD 138

Query: 124 RTYHCPWCNICVEDFDHHCKWVNNCIGHRNFRFFMLLVLSLCLYS-GAMLVTCLIFL--- 179
           R +HC  C  C+   DHHC WVNNC+G  N ++F+L  + + L S  A+++    FL   
Sbjct: 139 RAHHCSVCKRCIRKMDHHCPWVNNCVGENNQKYFVLFTMYIALISLHALIMVGFHFLHCF 198

Query: 180 --VRTTHLPFSTDKAIAIVVAVSAAGLLVPLSLLLL--------------IQALSVSSAD 223
               T    FS    + +++ +   GLL  +   ++              I+ L   +  
Sbjct: 199 EEDWTKCSSFSPPTTVILLILLCFEGLLFLIFTSVMFGTQVHSICTDETGIERLKRKNQP 258

Query: 224 RTYKGKCRHLQGYNPFDQGCASNWYLTICAPLGPKYMAEAVQLQRV 269
           R + G  + ++    F    + NW+     P  P+  ++   +++V
Sbjct: 259 REHMGSWQSVK--ETFGGDFSLNWFNPFSRPCQPEIPSDKDMVRQV 302


>gi|206597477 zinc finger, DHHC-type containing 3 isoform 1 [Homo
           sapiens]
          Length = 299

 Score = 84.0 bits (206), Expect = 2e-16
 Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 13/165 (7%)

Query: 11  VKEPHPLPLVPRPWFLPS---LFAAFNVVLLVFFSGLFFAFPCRWLAQNGEWAFPVITGS 67
           V  P+P P V   WF+     +  A     LV ++     F    L  + ++ + +I G 
Sbjct: 25  VPPPYPGP-VGTMWFIRDGCGIACAIVTWFLVLYAEFVVLFVM--LIPSRDYVYSIINGI 81

Query: 68  LF-VLTFFSLVS---LNFSDPGILHQGSAEQGPLTVHVVWVNHGAFRLQWCPKCCFHRPP 123
           +F +L F +L S      +DPG + +G+A +  +    +      ++   CPKCC  +P 
Sbjct: 82  VFNLLAFLALASHCRAMLTDPGAVPKGNATKEFIESLQLKPGQVVYK---CPKCCSIKPD 138

Query: 124 RTYHCPWCNICVEDFDHHCKWVNNCIGHRNFRFFMLLVLSLCLYS 168
           R +HC  C  C+   DHHC WVNNC+G  N ++F+L  + + L S
Sbjct: 139 RAHHCSVCKRCIRKMDHHCPWVNNCVGENNQKYFVLFTMYIALIS 183


>gi|7706133 zinc finger, DHHC-type containing 3 isoform 2 [Homo
           sapiens]
          Length = 327

 Score = 84.0 bits (206), Expect = 2e-16
 Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 13/165 (7%)

Query: 11  VKEPHPLPLVPRPWFLPS---LFAAFNVVLLVFFSGLFFAFPCRWLAQNGEWAFPVITGS 67
           V  P+P P V   WF+     +  A     LV ++     F    L  + ++ + +I G 
Sbjct: 25  VPPPYPGP-VGTMWFIRDGCGIACAIVTWFLVLYAEFVVLFVM--LIPSRDYVYSIINGI 81

Query: 68  LF-VLTFFSLVS---LNFSDPGILHQGSAEQGPLTVHVVWVNHGAFRLQWCPKCCFHRPP 123
           +F +L F +L S      +DPG + +G+A +  +    +      ++   CPKCC  +P 
Sbjct: 82  VFNLLAFLALASHCRAMLTDPGAVPKGNATKEFIESLQLKPGQVVYK---CPKCCSIKPD 138

Query: 124 RTYHCPWCNICVEDFDHHCKWVNNCIGHRNFRFFMLLVLSLCLYS 168
           R +HC  C  C+   DHHC WVNNC+G  N ++F+L  + + L S
Sbjct: 139 RAHHCSVCKRCIRKMDHHCPWVNNCVGENNQKYFVLFTMYIALIS 183


>gi|224493964 zinc finger, DHHC-type containing 7 isoform 1 [Homo
           sapiens]
          Length = 345

 Score = 82.0 bits (201), Expect = 6e-16
 Identities = 39/98 (39%), Positives = 53/98 (54%), Gaps = 6/98 (6%)

Query: 114 CPKCCFHRPPRTYHCPWCNICVEDFDHHCKWVNNCIGHRNFRFFMLLVLSLCLYSGAMLV 173
           CPKCC  +P R +HC  C  C+   DHHC WVNNC+G +N RFF+L  + + L S   L+
Sbjct: 169 CPKCCCIKPERAHHCSICKRCIRKMDHHCPWVNNCVGEKNQRFFVLFTMYIALSSVHALI 228

Query: 174 TC---LIFLVR---TTHLPFSTDKAIAIVVAVSAAGLL 205
            C    I  VR   T    FS    + +++ +   GLL
Sbjct: 229 LCGFQFISCVRGQWTECSDFSPPITVILLIFLCLEGLL 266


>gi|49457851 zinc finger, DHHC-type containing 20 [Homo sapiens]
          Length = 354

 Score = 80.5 bits (197), Expect = 2e-15
 Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 6/152 (3%)

Query: 102 VWVNHGAFRLQWCPKCCFHRPPRTYHCPWCNICVEDFDHHCKWVNNCIGHRNFRFFMLLV 161
           ++    +  +++C KC   +P R +HC  C+ C+   DHHC WVNNC+G  N++FF+L +
Sbjct: 116 IYTTSASKTIRYCEKCQLIKPDRAHHCSACDSCILKMDHHCPWVNNCVGFSNYKFFLLFL 175

Query: 162 LSLCLYSGAMLVTCLIFLVR--TTHLPFSTDKAIAIVVAVSAAGLLVPLSLLLLIQALSV 219
           L   LY   +  T L + ++  T  L  +  K   + +   +A   + +  L       V
Sbjct: 176 LYSLLYCLFVAATVLEYFIKFWTNELTDTRAKFHVLFLFFVSAMFFISVLSLFSYHCWLV 235

Query: 220 SSADRTYKGKCRHLQGYNP----FDQGCASNW 247
                T +        Y P    F  GC+ NW
Sbjct: 236 GKNRTTIESFRAPTFSYGPDGNGFSLGCSKNW 267


>gi|37594451 Abl-philin 2 isoform 2 [Homo sapiens]
          Length = 361

 Score = 79.0 bits (193), Expect = 5e-15
 Identities = 52/176 (29%), Positives = 78/176 (44%), Gaps = 26/176 (14%)

Query: 114 CPKCCFHRPPRTYHCPWCNICVEDFDHHCKWVNNCIGHRNFR------FFMLLVLSLCLY 167
           C KC + +P RT+HC  CN CV   DHHC W+NNC+GH N R      FFM L    C Y
Sbjct: 157 CKKCIYPKPARTHHCSICNRCVLKMDHHCPWLNNCVGHYNHRYFFSFCFFMTLGCVYCSY 216

Query: 168 SGAMLVTCLIFLVRTTHL----PFS-----TDKAIAIVVAVSAAGLLVPLSLLLLIQALS 218
               L       + T H      FS     T K++ + +    + + + L  L +  A+ 
Sbjct: 217 GSWDLFREAYAAIETYHQTPPPTFSFRERMTHKSL-VYLWFLCSSVALALGALTVWHAVL 275

Query: 219 VSSADRTY-----KGKCRHLQG-----YNPFDQGCASNWYLTICAPLGPKYMAEAV 264
           +S  + +      K + R LQ       NP++ GC  NW + +    G  ++   +
Sbjct: 276 ISRGETSIERHINKKERRRLQAKGRVFRNPYNYGCLDNWKVFLGVDTGRHWLTRVL 331


>gi|37594447 Abl-philin 2 isoform 4 [Homo sapiens]
          Length = 296

 Score = 79.0 bits (193), Expect = 5e-15
 Identities = 52/176 (29%), Positives = 78/176 (44%), Gaps = 26/176 (14%)

Query: 114 CPKCCFHRPPRTYHCPWCNICVEDFDHHCKWVNNCIGHRNFR------FFMLLVLSLCLY 167
           C KC + +P RT+HC  CN CV   DHHC W+NNC+GH N R      FFM L    C Y
Sbjct: 92  CKKCIYPKPARTHHCSICNRCVLKMDHHCPWLNNCVGHYNHRYFFSFCFFMTLGCVYCSY 151

Query: 168 SGAMLVTCLIFLVRTTHL----PFS-----TDKAIAIVVAVSAAGLLVPLSLLLLIQALS 218
               L       + T H      FS     T K++ + +    + + + L  L +  A+ 
Sbjct: 152 GSWDLFREAYAAIETYHQTPPPTFSFRERMTHKSL-VYLWFLCSSVALALGALTVWHAVL 210

Query: 219 VSSADRTY-----KGKCRHLQG-----YNPFDQGCASNWYLTICAPLGPKYMAEAV 264
           +S  + +      K + R LQ       NP++ GC  NW + +    G  ++   +
Sbjct: 211 ISRGETSIERHINKKERRRLQAKGRVFRNPYNYGCLDNWKVFLGVDTGRHWLTRVL 266


>gi|7705949 zinc finger, DHHC-type containing 2 [Homo sapiens]
          Length = 367

 Score = 77.8 bits (190), Expect = 1e-14
 Identities = 50/163 (30%), Positives = 74/163 (45%), Gaps = 17/163 (10%)

Query: 111 LQWCPKCCFHRPPRTYHCPWCNICVEDFDHHCKWVNNCIGHRNFRFFMLLVLSLCLYSGA 170
           +++C +C   +P R +HC  C+ C+   DHHC WVNNC+G  N++FF+L +    LY   
Sbjct: 126 IRYCDRCQLIKPDRCHHCSVCDKCILKMDHHCPWVNNCVGFSNYKFFLLFLAYSLLYCLF 185

Query: 171 MLVTCLIFLVR--TTHLPFSTDKAIAIVVAVSAAGLLVPLSLLLLIQALSVSSADRTYKG 228
           +  T L + ++  T  LP +  K   + +  +AA   V LS L       VS    T + 
Sbjct: 186 IAATDLQYFIKFWTNGLPDTQAKFHIMFLFFAAAMFSVSLSSLFGYHCWLVSKNKSTLEA 245

Query: 229 ----KCRHLQGYNPFDQGCASN-----------WYLTICAPLG 256
                 RH    N F  G + N           W L I + LG
Sbjct: 246 FRSPVFRHGTDKNGFSLGFSKNMRQVFGDEKKYWLLPIFSSLG 288


>gi|24307963 zinc finger, DHHC-type containing 1 [Homo sapiens]
          Length = 485

 Score = 76.3 bits (186), Expect = 3e-14
 Identities = 58/176 (32%), Positives = 77/176 (43%), Gaps = 32/176 (18%)

Query: 14  PHPLPLVPRPWFLPSLFAAFNVVLLVFFSGLFFAFPCRWLAQNGEWAFPVITGSLFVLTF 73
           PHPL +V   W L   FA     +LV         P  W+         +  G L V   
Sbjct: 48  PHPLQIVA--WLLYLFFAVIGFGILVPL------LPHHWVPAGYACMGAIFAGHLVV--H 97

Query: 74  FSLVSLNFSDPGILHQGSAEQGPLTV-------HVVWVNHGAFRLQWCPKCCFHRPPRTY 126
            + VS++ +D  +  +  A  GPL +       HV+   H       C  C      R+ 
Sbjct: 98  LTAVSIDPADANVRDKSYA--GPLPIFNRSQHAHVIEDLH-------CNLCNVDVSARSK 148

Query: 127 HCPWCNICVEDFDHHCKWVNNCIGHRNFRFFMLLVLSLCLYSGAMLVTCLIFLVRT 182
           HC  CN CV  FDHHCKW+NNC+G RN+R F+  V S      A+L   L+ LV T
Sbjct: 149 HCSACNKCVCGFDHHCKWLNNCVGERNYRLFLHSVAS------ALLGVLLLVLVAT 198


>gi|197304690 zinc finger, DHHC-type containing 4 [Homo sapiens]
          Length = 344

 Score = 75.9 bits (185), Expect = 4e-14
 Identities = 34/77 (44%), Positives = 44/77 (57%), Gaps = 3/77 (3%)

Query: 114 CPKCCFHRPPRTYHCPWCNICVEDFDHHCKWVNNCIGHRNFRFFMLLVLSLCLYSGAMLV 173
           C  C   +P R+ HC  CN CV  FDHHC WVNNCIG  N R+F++ VL+L   +  + +
Sbjct: 151 CSTCDLRKPARSKHCSVCNWCVHRFDHHCVWVNNCIGAWNIRYFLIYVLTLTASAATVAI 210

Query: 174 TCLIFLVRTTHLPFSTD 190
               FLV   HL   +D
Sbjct: 211 VSTTFLV---HLVVMSD 224


>gi|197304688 zinc finger, DHHC-type containing 4 [Homo sapiens]
          Length = 344

 Score = 75.9 bits (185), Expect = 4e-14
 Identities = 34/77 (44%), Positives = 44/77 (57%), Gaps = 3/77 (3%)

Query: 114 CPKCCFHRPPRTYHCPWCNICVEDFDHHCKWVNNCIGHRNFRFFMLLVLSLCLYSGAMLV 173
           C  C   +P R+ HC  CN CV  FDHHC WVNNCIG  N R+F++ VL+L   +  + +
Sbjct: 151 CSTCDLRKPARSKHCSVCNWCVHRFDHHCVWVNNCIGAWNIRYFLIYVLTLTASAATVAI 210

Query: 174 TCLIFLVRTTHLPFSTD 190
               FLV   HL   +D
Sbjct: 211 VSTTFLV---HLVVMSD 224


>gi|197304686 zinc finger, DHHC-type containing 4 [Homo sapiens]
          Length = 344

 Score = 75.9 bits (185), Expect = 4e-14
 Identities = 34/77 (44%), Positives = 44/77 (57%), Gaps = 3/77 (3%)

Query: 114 CPKCCFHRPPRTYHCPWCNICVEDFDHHCKWVNNCIGHRNFRFFMLLVLSLCLYSGAMLV 173
           C  C   +P R+ HC  CN CV  FDHHC WVNNCIG  N R+F++ VL+L   +  + +
Sbjct: 151 CSTCDLRKPARSKHCSVCNWCVHRFDHHCVWVNNCIGAWNIRYFLIYVLTLTASAATVAI 210

Query: 174 TCLIFLVRTTHLPFSTD 190
               FLV   HL   +D
Sbjct: 211 VSTTFLV---HLVVMSD 224


>gi|8922448 zinc finger, DHHC-type containing 4 [Homo sapiens]
          Length = 344

 Score = 75.9 bits (185), Expect = 4e-14
 Identities = 34/77 (44%), Positives = 44/77 (57%), Gaps = 3/77 (3%)

Query: 114 CPKCCFHRPPRTYHCPWCNICVEDFDHHCKWVNNCIGHRNFRFFMLLVLSLCLYSGAMLV 173
           C  C   +P R+ HC  CN CV  FDHHC WVNNCIG  N R+F++ VL+L   +  + +
Sbjct: 151 CSTCDLRKPARSKHCSVCNWCVHRFDHHCVWVNNCIGAWNIRYFLIYVLTLTASAATVAI 210

Query: 174 TCLIFLVRTTHLPFSTD 190
               FLV   HL   +D
Sbjct: 211 VSTTFLV---HLVVMSD 224


>gi|226342941 zinc finger, DHHC-type containing 15 isoform 2 [Homo
           sapiens]
          Length = 328

 Score = 73.2 bits (178), Expect = 3e-13
 Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 2/131 (1%)

Query: 102 VWVNHGAFRLQWCPKCCFHRPPRTYHCPWCNICVEDFDHHCKWVNNCIGHRNFRFFMLLV 161
           V+   G+  +++C +C   +P R +HC  C +CV   DHHC WVNNCIG  N++FF+  +
Sbjct: 110 VYTRTGSGAVRFCDRCHLIKPDRCHHCSVCAMCVLKMDHHCPWVNNCIGFSNYKFFLQFL 169

Query: 162 LSLCLYSGAMLVTCLIFLVR--TTHLPFSTDKAIAIVVAVSAAGLLVPLSLLLLIQALSV 219
               LY   +  T   + ++     LP    K   + +   A    V L +L       V
Sbjct: 170 AYSVLYCLYIATTVFSYFIKYWRGELPSVRSKFHVLFLLFVACMFFVSLVILFGYHCWLV 229

Query: 220 SSADRTYKGKC 230
           S    T +  C
Sbjct: 230 SRNKTTLEAFC 240


>gi|21450653 zinc finger, DHHC-type containing 15 isoform 1 [Homo
           sapiens]
          Length = 337

 Score = 73.2 bits (178), Expect = 3e-13
 Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 2/131 (1%)

Query: 102 VWVNHGAFRLQWCPKCCFHRPPRTYHCPWCNICVEDFDHHCKWVNNCIGHRNFRFFMLLV 161
           V+   G+  +++C +C   +P R +HC  C +CV   DHHC WVNNCIG  N++FF+  +
Sbjct: 119 VYTRTGSGAVRFCDRCHLIKPDRCHHCSVCAMCVLKMDHHCPWVNNCIGFSNYKFFLQFL 178

Query: 162 LSLCLYSGAMLVTCLIFLVR--TTHLPFSTDKAIAIVVAVSAAGLLVPLSLLLLIQALSV 219
               LY   +  T   + ++     LP    K   + +   A    V L +L       V
Sbjct: 179 AYSVLYCLYIATTVFSYFIKYWRGELPSVRSKFHVLFLLFVACMFFVSLVILFGYHCWLV 238

Query: 220 SSADRTYKGKC 230
           S    T +  C
Sbjct: 239 SRNKTTLEAFC 249


>gi|37594449 Abl-philin 2 isoform 1 [Homo sapiens]
          Length = 377

 Score = 72.8 bits (177), Expect = 4e-13
 Identities = 29/62 (46%), Positives = 36/62 (58%), Gaps = 4/62 (6%)

Query: 114 CPKCCFHRPPRTYHCPWCNICVEDFDHHCKWVNNCIGHRNFRFFMLLVLSLCLYSGAMLV 173
           C KC + +P RT+HC  CN CV   DHHC W+NNC+GH N R+F     S C +     V
Sbjct: 157 CKKCIYPKPARTHHCSICNRCVLKMDHHCPWLNNCVGHYNHRYF----FSFCFFMTLGCV 212

Query: 174 TC 175
            C
Sbjct: 213 YC 214


>gi|37594455 Abl-philin 2 isoform 1 [Homo sapiens]
          Length = 377

 Score = 72.8 bits (177), Expect = 4e-13
 Identities = 29/62 (46%), Positives = 36/62 (58%), Gaps = 4/62 (6%)

Query: 114 CPKCCFHRPPRTYHCPWCNICVEDFDHHCKWVNNCIGHRNFRFFMLLVLSLCLYSGAMLV 173
           C KC + +P RT+HC  CN CV   DHHC W+NNC+GH N R+F     S C +     V
Sbjct: 157 CKKCIYPKPARTHHCSICNRCVLKMDHHCPWLNNCVGHYNHRYF----FSFCFFMTLGCV 212

Query: 174 TC 175
            C
Sbjct: 213 YC 214


>gi|21361910 zinc finger, DHHC domain containing 12 [Homo sapiens]
          Length = 267

 Score = 72.0 bits (175), Expect = 6e-13
 Identities = 58/207 (28%), Positives = 89/207 (42%), Gaps = 23/207 (11%)

Query: 55  QNGEWAFPVITGSLFVLTFFSLVSLNFSDPGILHQGSAEQGPLTVHVVWVNHGAFRLQWC 114
           + GE   P+    L + +    ++++  DPG ++     Q  L      +   A  L+ C
Sbjct: 40  EQGELLLPLTFLLLVLGSLLLYLAVSLMDPGYVNVQPQPQEELKEEQTAMVPPAIPLRRC 99

Query: 115 PKCCFHRPPRTYHCPWCNICVEDFDHHCKWVNNCIGHRNFRFFM------LLVLSLCLY- 167
             C   +P R  HC  C  CV  +DHHC W+ NC+G RN   F+      L+VL   LY 
Sbjct: 100 RYCLVLQPLRARHCRECRRCVRRYDHHCPWMENCVGERNHPLFVVYLALQLVVLLWGLYL 159

Query: 168 --SGAMLVTCLIFLVRTTHLPFSTDKAIAIVVAVSAAGLLVPLSLLLLIQALSVSSADRT 225
             SG          +R++ L F+T   +++   V+        SLLL+     V+S   T
Sbjct: 160 AWSGLRFFQPWGLWLRSSGLLFATFLLLSLFSLVA--------SLLLVSHLYLVASNTTT 211

Query: 226 YKGKCRHLQGY------NPFDQGCASN 246
           ++    H   Y      NPFD+G   N
Sbjct: 212 WEFISSHRIAYLRQRPSNPFDRGLTRN 238


>gi|103471993 huntingtin interacting protein 14 [Homo sapiens]
          Length = 632

 Score = 71.6 bits (174), Expect = 8e-13
 Identities = 37/98 (37%), Positives = 52/98 (53%), Gaps = 3/98 (3%)

Query: 82  SDPGILHQGSAEQGPLTVHVVWVNHGAFRLQ-WCPKCCFHRPPRTYHCPWCNICVEDFDH 140
           SDPGI+ + + EQ   T+ V     G+  L  +C  C   +P R+ HC  CN C+  FDH
Sbjct: 408 SDPGII-KATEEQKKKTI-VELAETGSLDLSIFCSTCLIRKPVRSKHCGVCNRCIAKFDH 465

Query: 141 HCKWVNNCIGHRNFRFFMLLVLSLCLYSGAMLVTCLIF 178
           HC WV NC+G  N R+FM  +  L      M+  C+ +
Sbjct: 466 HCPWVGNCVGAGNHRYFMGYLFFLLFMICWMIYGCISY 503


>gi|47933348 zinc finger, DHHC domain containing 13 isoform 2 [Homo
           sapiens]
          Length = 492

 Score = 70.9 bits (172), Expect = 1e-12
 Identities = 50/180 (27%), Positives = 75/180 (41%), Gaps = 16/180 (8%)

Query: 24  WFLPSLFAAFNVVL--LVFFSGLFFAFPCRWLAQNGEWA---FPVITGSLFVLTF-FSLV 77
           +FL SLF  F V    LV+    F      W+     W    FP + G+ F  +F FS+V
Sbjct: 198 FFLTSLFPRFLVGYKNLVYLPTAFLLSSVFWIFMT--WFILFFPDLAGAPFYFSFIFSIV 255

Query: 78  SLNF-------SDPGILHQGSAEQGPLTVHVVWVNHGAFRLQWCPKCCFHRPPRTYHCPW 130
           +  +       +DPG       E+    + +       FR  +C  C   +P R+ HC  
Sbjct: 256 AFLYFFYKTWATDPGFTKASEEEKKVNIITLAETGSLDFRT-FCTSCLIRKPLRSLHCHV 314

Query: 131 CNICVEDFDHHCKWVNNCIGHRNFRFFMLLVLSLCLYSGAMLVTCLIFLVRTTHLPFSTD 190
           CN CV  +D HC W   CIG  N  +++  +  L +  G ++    I+L       F  D
Sbjct: 315 CNCCVARYDQHCLWTGRCIGFGNHHYYIFFLFFLSMVCGWIIYGSFIYLSSHCATTFKED 374


>gi|47933346 zinc finger, DHHC domain containing 13 isoform 1 [Homo
           sapiens]
          Length = 622

 Score = 70.9 bits (172), Expect = 1e-12
 Identities = 50/180 (27%), Positives = 75/180 (41%), Gaps = 16/180 (8%)

Query: 24  WFLPSLFAAFNVVL--LVFFSGLFFAFPCRWLAQNGEWA---FPVITGSLFVLTF-FSLV 77
           +FL SLF  F V    LV+    F      W+     W    FP + G+ F  +F FS+V
Sbjct: 328 FFLTSLFPRFLVGYKNLVYLPTAFLLSSVFWIFMT--WFILFFPDLAGAPFYFSFIFSIV 385

Query: 78  SLNF-------SDPGILHQGSAEQGPLTVHVVWVNHGAFRLQWCPKCCFHRPPRTYHCPW 130
           +  +       +DPG       E+    + +       FR  +C  C   +P R+ HC  
Sbjct: 386 AFLYFFYKTWATDPGFTKASEEEKKVNIITLAETGSLDFRT-FCTSCLIRKPLRSLHCHV 444

Query: 131 CNICVEDFDHHCKWVNNCIGHRNFRFFMLLVLSLCLYSGAMLVTCLIFLVRTTHLPFSTD 190
           CN CV  +D HC W   CIG  N  +++  +  L +  G ++    I+L       F  D
Sbjct: 445 CNCCVARYDQHCLWTGRCIGFGNHHYYIFFLFFLSMVCGWIIYGSFIYLSSHCATTFKED 504


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.328    0.141    0.489 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,082,765
Number of Sequences: 37866
Number of extensions: 688398
Number of successful extensions: 3548
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 3419
Number of HSP's gapped (non-prelim): 72
length of query: 309
length of database: 18,247,518
effective HSP length: 102
effective length of query: 207
effective length of database: 14,385,186
effective search space: 2977733502
effective search space used: 2977733502
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 62 (28.5 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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