Guide to the Human Genome
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Name: RPS4Y2 Sequence: fasta or formatted (263aa) NCBI GI: 88703062
Description:

ribosomal protein S4, Y-linked 2

Referenced in:

Gene Families
Ribosomes
Y-linked Genes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         16           2
 C cysteine            2.3          6           1
 D aspartate           4.9         13           1
 E glutamate           3.4          9           2
 F phenylalanine       3.8         10           1
 G glycine             8.7         23           1
 H histidine           3.8         10           1
 I isoleucine          8.7         23           1
 K lysine              9.9         26           2
 L leucine             7.2         19           1
 M methionine          1.5          4           1
 N asparagine          4.2         11           1
 P proline             4.9         13           1
 Q glutamine           1.1          3           1
 R arginine            7.6         20           1
 S serine              3.4          9           2
 T threonine           6.8         18           1
 V valine              8.7         23           2
 W tryptophan          0.8          2           1
 Y tyrosine            1.9          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ribosomal protein S4, Y-linked 2 
RPS4Y1                0.945   ribosomal protein S4, Y-linked 1 Y isoform 
RPS4X                 0.922   ribosomal protein S4, X-linked X isoform 
MLL4                  0.010   myeloid/lymphoid or mixed-lineage leukemia 4 
ALDH5A1               0.008   aldehyde dehydrogenase 5A1 isoform 2 precursor 
ALDH5A1               0.008   aldehyde dehydrogenase 5A1 isoform 1 precursor [Homo...
ZFY                   0.006   zinc finger protein, Y-linked isoform 1 
ZFY                   0.006   zinc finger protein, Y-linked isoform 3 
ZFY                   0.006   zinc finger protein, Y-linked isoform 2 
ZNF76                 0.006   zinc finger protein 76 (expressed in testis) 
ZFX                   0.006   zinc finger protein, X-linked 
TTC21A                0.006   tetratricopeptide repeat domain 21A isoform 1 [Homo...
TTC21A                0.006   tetratricopeptide repeat domain 21A isoform 2 [Homo...
FREM2                 0.006   FRAS1-related extracellular matrix protein 2 precurs...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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