Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: CYB5B Sequence: fasta or formatted (150aa) NCBI GI: 83921614
Description:

cytochrome b5 outer mitochondrial membrane precursor

Referenced in:

Mitochondria
Additional Enzymes and Related Sequences

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0          9           1
 C cysteine            1.3          2           1
 D aspartate           6.0          9           1
 E glutamate          10.0         15           2
 F phenylalanine       2.0          3           1
 G glycine             8.7         13           2
 H histidine           2.7          4           1
 I isoleucine          4.0          6           2
 K lysine              6.0          9           1
 L leucine             8.7         13           2
 M methionine          2.0          3           1
 N asparagine          2.0          3           1
 P proline             3.3          5           1
 Q glutamine           2.0          3           1
 R arginine            4.0          6           1
 S serine             12.7         19           2
 T threonine           4.0          6           1
 V valine              6.7         10           1
 W tryptophan          2.0          3           1
 Y tyrosine            6.0          9           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cytochrome b5 outer mitochondrial membrane precursor... 
CYB5A                 0.404   cytochrome b-5 isoform 1 
CYB5A                 0.333   cytochrome b-5 isoform 2 
FADS1                 0.135   fatty acid desaturase 1 
FADS2                 0.135   fatty acid desaturase 2 
CYB5R4                0.117   cytochrome b5 reductase 4 
SUOX                  0.117   sulfite oxidase 
SUOX                  0.117   sulfite oxidase 
SUOX                  0.117   sulfite oxidase 
FA2H                  0.113   fatty acid 2-hydroxylase 
FADS3                 0.078   fatty acid desaturase 3 
HERC2                 0.060   hect domain and RLD 2 
CYB5D1                0.050   cytochrome b5 domain containing 1 
AQP4                  0.035   aquaporin 4 isoform b 
AQP4                  0.035   aquaporin 4 isoform a 
AQP5                  0.025   aquaporin 5 
AQP2                  0.021   aquaporin 2 
AQP8                  0.018   aquaporin 8 
OTUD7B                0.014   zinc finger protein Cezanne 
KDSR                  0.014   3-ketodihydrosphingosine reductase precursor 
SPINK5                0.011   serine peptidase inhibitor, Kazal type 5 isoform b p...
SPINK5                0.011   serine peptidase inhibitor, Kazal type 5 isoform a ...
MIP                   0.011   major intrinsic protein of lens fiber 
AQP6                  0.011   aquaporin 6 
CACNB2                0.007   calcium channel, voltage-dependent, beta 2 subunit ...
CACNB2                0.007   calcium channel, voltage-dependent, beta 2 subunit i...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press