Guide to the Human Genome
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Name: PLA1A Sequence: fasta or formatted (456aa) NCBI GI: 7706661
Description:

phospholipase A1 member A

Referenced in:

Lipid Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         27           1
 C cysteine            3.5         16           1
 D aspartate           4.2         19           1
 E glutamate           3.9         18           2
 F phenylalanine       5.3         24           2
 G glycine             8.6         39           2
 H histidine           2.4         11           2
 I isoleucine          6.6         30           2
 K lysine              5.0         23           2
 L leucine            10.7         49           2
 M methionine          1.3          6           1
 N asparagine          4.2         19           1
 P proline             5.9         27           2
 Q glutamine           3.9         18           2
 R arginine            3.1         14           1
 S serine              8.1         37           3
 T threonine           5.5         25           2
 V valine              7.9         36           1
 W tryptophan          1.3          6           1
 Y tyrosine            2.6         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phospholipase A1 member A 
LIPH                  0.249   lipase, member H precursor 
LIPI                  0.248   lipase, member I 
LIPC                  0.178   lipase C precursor 
LIPG                  0.162   endothelial lipase precursor 
PNLIPRP2              0.161   pancreatic lipase-related protein 2 
PNLIP                 0.153   pancreatic lipase precursor 
PNLIPRP1              0.140   pancreatic lipase-related protein 1 
PNLIPRP3              0.136   pancreatic lipase-related protein 3 
LPL                   0.136   lipoprotein lipase precursor 
ABHD6                 0.008   abhydrolase domain containing 6 
ASB12                 0.006   ankyrin repeat and SOCS box-containing protein 12 [H...
MMP17                 0.006   matrix metalloproteinase 17 preproprotein 
ALDH4A1               0.004   aldehyde dehydrogenase 4A1 isoform a precursor [Homo...
ALDH4A1               0.004   aldehyde dehydrogenase 4A1 isoform b 
ALDH4A1               0.004   aldehyde dehydrogenase 4A1 isoform a precursor [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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