Search of human proteins with 7662056

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|7662056 protocadherin gamma subfamily A, 8 isoform 2
precursor [Homo sapiens]
         (820 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|7662056 protocadherin gamma subfamily A, 8 isoform 2 precurso...  1612   0.0  
gi|14270484 protocadherin gamma subfamily A, 8 isoform 1 precurs...  1591   0.0  
gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precurs...  1230   0.0  
gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precurs...  1230   0.0  
gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precur...  1150   0.0  
gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precur...  1150   0.0  
gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precurs...  1148   0.0  
gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precurs...  1145   0.0  
gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precurs...  1138   0.0  
gi|14196465 protocadherin gamma subfamily A, 3 isoform 2 precurs...  1137   0.0  
gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precurs...  1136   0.0  
gi|14196468 protocadherin gamma subfamily A, 4 isoform 2 precurs...  1132   0.0  
gi|11056026 protocadherin gamma subfamily A, 4 isoform 1 precurs...  1132   0.0  
gi|14589880 protocadherin gamma subfamily A, 3 isoform 1 precurs...  1130   0.0  
gi|14196471 protocadherin gamma subfamily A, 5 isoform 2 precurs...  1126   0.0  
gi|11056024 protocadherin gamma subfamily A, 5 isoform 1 precurs...  1126   0.0  
gi|14196457 protocadherin gamma subfamily A, 12 isoform 2 precur...  1107   0.0  
gi|8850232 protocadherin gamma subfamily A, 12 isoform 1 precurs...  1107   0.0  
gi|14196451 protocadherin gamma subfamily A, 11 isoform 2 precur...  1103   0.0  
gi|11128039 protocadherin gamma subfamily A, 11 isoform 1 precur...  1103   0.0  
gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precurs...  1094   0.0  
gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precurs...  1094   0.0  
gi|14196462 protocadherin gamma subfamily A, 2 isoform 2 precurs...  1091   0.0  
gi|11056030 protocadherin gamma subfamily A, 2 isoform 1 precurs...  1089   0.0  
gi|14196455 protocadherin gamma subfamily A, 11 isoform 3 precur...   852   0.0  
gi|11128035 protocadherin gamma subfamily B, 2 isoform 1 precurs...   659   0.0  
gi|14270493 protocadherin gamma subfamily B, 2 isoform 2 precurs...   659   0.0  
gi|14270505 protocadherin gamma subfamily B, 5 isoform 2 precurs...   655   0.0  
gi|11128031 protocadherin gamma subfamily B, 5 isoform 1 precurs...   655   0.0  
gi|11128029 protocadherin gamma subfamily B, 6 isoform 1 precurs...   653   0.0  

>gi|7662056 protocadherin gamma subfamily A, 8 isoform 2 precursor
           [Homo sapiens]
          Length = 820

 Score = 1612 bits (4173), Expect = 0.0
 Identities = 820/820 (100%), Positives = 820/820 (100%)

Query: 1   MAAPQSRPRRGELILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLA 60
           MAAPQSRPRRGELILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLA
Sbjct: 1   MAAPQSRPRRGELILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLA 60

Query: 61  KHGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVE 120
           KHGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVE
Sbjct: 61  KHGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVE 120

Query: 121 IEIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSL 180
           IEIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSL
Sbjct: 121 IEIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSL 180

Query: 181 DVQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAP 240
           DVQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAP
Sbjct: 181 DVQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAP 240

Query: 241 VFPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGE 300
           VFPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGE
Sbjct: 241 VFPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGE 300

Query: 301 ISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENS 360
           ISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENS
Sbjct: 301 ISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENS 360

Query: 361 LPGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNI 420
           LPGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNI
Sbjct: 361 LPGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNI 420

Query: 421 TVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPD 480
           TVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPD
Sbjct: 421 TVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPD 480

Query: 481 SQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDP 540
           SQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDP
Sbjct: 481 SQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDP 540

Query: 541 PLSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQ 600
           PLSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
           NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660

Query: 661 TVAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWH 720
           TVAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWH
Sbjct: 661 TVAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWH 720

Query: 721 KSRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLI 780
           KSRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLI
Sbjct: 721 KSRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLI 780

Query: 781 SQEGCEKNDSLLTSVDFHEYKNEADHGQVSLVLCLLLISR 820
           SQEGCEKNDSLLTSVDFHEYKNEADHGQVSLVLCLLLISR
Sbjct: 781 SQEGCEKNDSLLTSVDFHEYKNEADHGQVSLVLCLLLISR 820


>gi|14270484 protocadherin gamma subfamily A, 8 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 1591 bits (4119), Expect = 0.0
 Identities = 808/808 (100%), Positives = 808/808 (100%)

Query: 1   MAAPQSRPRRGELILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLA 60
           MAAPQSRPRRGELILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLA
Sbjct: 1   MAAPQSRPRRGELILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLA 60

Query: 61  KHGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVE 120
           KHGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVE
Sbjct: 61  KHGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVE 120

Query: 121 IEIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSL 180
           IEIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSL
Sbjct: 121 IEIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSL 180

Query: 181 DVQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAP 240
           DVQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAP
Sbjct: 181 DVQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAP 240

Query: 241 VFPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGE 300
           VFPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGE
Sbjct: 241 VFPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGE 300

Query: 301 ISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENS 360
           ISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENS
Sbjct: 301 ISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENS 360

Query: 361 LPGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNI 420
           LPGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNI
Sbjct: 361 LPGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNI 420

Query: 421 TVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPD 480
           TVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPD
Sbjct: 421 TVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPD 480

Query: 481 SQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDP 540
           SQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDP
Sbjct: 481 SQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDP 540

Query: 541 PLSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQ 600
           PLSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
           NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660

Query: 661 TVAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWH 720
           TVAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWH
Sbjct: 661 TVAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWH 720

Query: 721 KSRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLI 780
           KSRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLI
Sbjct: 721 KSRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLI 780

Query: 781 SQEGCEKNDSLLTSVDFHEYKNEADHGQ 808
           SQEGCEKNDSLLTSVDFHEYKNEADHGQ
Sbjct: 781 SQEGCEKNDSLLTSVDFHEYKNEADHGQ 808


>gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 1230 bits (3182), Expect = 0.0
 Identities = 627/796 (78%), Positives = 682/796 (85%)

Query: 1   MAAPQSRPRRGELILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLA 60
           MAAP     RG L+LLC+LLG LWE    QIRYSVPEET+KG  VGNISKDL L+PR+LA
Sbjct: 1   MAAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELA 60

Query: 61  KHGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVE 120
           +  VRIVSRGRTQLF+LNPRSG+L+TAGRIDREELCAQSPRCL+N   LVED+ KL+G+E
Sbjct: 61  ERRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIE 120

Query: 121 IEIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSL 180
           IE+ DIND+ PKFQ E LEVKINEIAVPGARYPLPEA+DPDVGVNSLQSYQLSPNHHFSL
Sbjct: 121 IEVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSL 180

Query: 181 DVQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAP 240
           +VQTGDNGAINPELVLERALDREE  AHHLVLTASDGG+P RSSTVRIHVTVLDTNDNAP
Sbjct: 181 NVQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAP 240

Query: 241 VFPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGE 300
           VF   IYRVKVLEN+PPGT LLT TASD DEGINGKVAYKF KINEKQ+ LFQLNENTGE
Sbjct: 241 VFAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGE 300

Query: 301 ISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENS 360
           IS AKSLDYEECSFYEMEIQAED G L G TK+LISVEDVNDNRPEV ITSLFSPV E++
Sbjct: 301 ISTAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDA 360

Query: 361 LPGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNI 420
             GTVI   + HD+DSGKNGQVVC  ++NL F LE S  +YYRL+T + LDRE  S YNI
Sbjct: 361 PQGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNI 420

Query: 421 TVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPD 480
           TV A+D GTPPLSTE  I L V DINDNPP F  ASYS Y+ ENN RG SIFS+ A+DPD
Sbjct: 421 TVTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPD 480

Query: 481 SQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDP 540
           S EN++V YS+ EDT+QG+PLS+Y+SINSDTGVLYAL SFDYEQ RDLQ+ VTASDSG P
Sbjct: 481 SNENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSP 540

Query: 541 PLSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQ 600
           PLSSN+SL LFVLDQNDNAPEILYPALPTDGSTGVELAPRSAE GYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
           NAWLSYRL KASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660

Query: 661 TVAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWH 720
           TVA+ADSIP++L +LGSL+   D   S LTLYLVVAVA +SCVFL FV  LL LRLR WH
Sbjct: 661 TVAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWH 720

Query: 721 KSRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLI 780
            S LL+ +   L GVP SHFVGV+ V+AFLQTYSQE SLTADSRKSHLIFPQPNYAD LI
Sbjct: 721 SSHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLI 780

Query: 781 SQEGCEKNDSLLTSVD 796
           SQ+ CEKN+ L  SVD
Sbjct: 781 SQQSCEKNEPLCVSVD 796


>gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precursor
           [Homo sapiens]
          Length = 828

 Score = 1230 bits (3182), Expect = 0.0
 Identities = 627/796 (78%), Positives = 682/796 (85%)

Query: 1   MAAPQSRPRRGELILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLA 60
           MAAP     RG L+LLC+LLG LWE    QIRYSVPEET+KG  VGNISKDL L+PR+LA
Sbjct: 1   MAAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELA 60

Query: 61  KHGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVE 120
           +  VRIVSRGRTQLF+LNPRSG+L+TAGRIDREELCAQSPRCL+N   LVED+ KL+G+E
Sbjct: 61  ERRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIE 120

Query: 121 IEIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSL 180
           IE+ DIND+ PKFQ E LEVKINEIAVPGARYPLPEA+DPDVGVNSLQSYQLSPNHHFSL
Sbjct: 121 IEVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSL 180

Query: 181 DVQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAP 240
           +VQTGDNGAINPELVLERALDREE  AHHLVLTASDGG+P RSSTVRIHVTVLDTNDNAP
Sbjct: 181 NVQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAP 240

Query: 241 VFPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGE 300
           VF   IYRVKVLEN+PPGT LLT TASD DEGINGKVAYKF KINEKQ+ LFQLNENTGE
Sbjct: 241 VFAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGE 300

Query: 301 ISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENS 360
           IS AKSLDYEECSFYEMEIQAED G L G TK+LISVEDVNDNRPEV ITSLFSPV E++
Sbjct: 301 ISTAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDA 360

Query: 361 LPGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNI 420
             GTVI   + HD+DSGKNGQVVC  ++NL F LE S  +YYRL+T + LDRE  S YNI
Sbjct: 361 PQGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNI 420

Query: 421 TVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPD 480
           TV A+D GTPPLSTE  I L V DINDNPP F  ASYS Y+ ENN RG SIFS+ A+DPD
Sbjct: 421 TVTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPD 480

Query: 481 SQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDP 540
           S EN++V YS+ EDT+QG+PLS+Y+SINSDTGVLYAL SFDYEQ RDLQ+ VTASDSG P
Sbjct: 481 SNENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSP 540

Query: 541 PLSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQ 600
           PLSSN+SL LFVLDQNDNAPEILYPALPTDGSTGVELAPRSAE GYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
           NAWLSYRL KASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660

Query: 661 TVAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWH 720
           TVA+ADSIP++L +LGSL+   D   S LTLYLVVAVA +SCVFL FV  LL LRLR WH
Sbjct: 661 TVAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWH 720

Query: 721 KSRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLI 780
            S LL+ +   L GVP SHFVGV+ V+AFLQTYSQE SLTADSRKSHLIFPQPNYAD LI
Sbjct: 721 SSHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLI 780

Query: 781 SQEGCEKNDSLLTSVD 796
           SQ+ CEKN+ L  SVD
Sbjct: 781 SQQSCEKNEPLCVSVD 796


>gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precursor
           [Homo sapiens]
          Length = 936

 Score = 1150 bits (2975), Expect = 0.0
 Identities = 596/795 (74%), Positives = 658/795 (82%), Gaps = 4/795 (0%)

Query: 1   MAAPQSRPRRGE----LILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDP 56
           MAA ++R +  +    L+LLC   G  WE G  QI YS+PEE +KGSFVGNISKDLGL P
Sbjct: 1   MAAQRNRSKESKDCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAP 60

Query: 57  RKLAKHGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKL 116
           R+LA+ GVRIVSRGRTQLF+LNPRSGSLITAGRIDREELCAQS RC+++ N LVED+ KL
Sbjct: 61  RELAERGVRIVSRGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKL 120

Query: 117 FGVEIEIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNH 176
           FG+EIE+ DINDN PKFQ E+L+VKINE    G R+PLPEA+DPDVGVNSLQSYQLSPN 
Sbjct: 121 FGIEIEVTDINDNAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNK 180

Query: 177 HFSLDVQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTN 236
           HFSL VQ+  NG   PELVLE +LDREEEA HHLVLTASDGG P RS TV + VTV D N
Sbjct: 181 HFSLRVQSRANGVKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDAN 240

Query: 237 DNAPVFPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNE 296
           DNAPVF  P YRV V EN+P GT+LLTVTA+D DEG NG+V Y FRK+ + Q   FQLN+
Sbjct: 241 DNAPVFTLPEYRVSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNK 300

Query: 297 NTGEISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPV 356
            TGEI I+++LDYEE  FYE+EIQAED GA L   K+LI+VEDVNDN PE+ ITSLFSPV
Sbjct: 301 YTGEIKISENLDYEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPV 360

Query: 357 LENSLPGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVS 416
            E+S  GTV+A L+VHD DS +NGQV C     LPFKLEKSI +YYRLV  + LDRE VS
Sbjct: 361 TEDSPLGTVVALLNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVS 420

Query: 417 IYNITVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTA 476
            YNITV A+D G+PPLSTE    L VADINDNPPTF   SY  YI ENN RGASIFS+TA
Sbjct: 421 SYNITVTATDGGSPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTA 480

Query: 477 HDPDSQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASD 536
            DPDS+ENAQ+ YS+ EDT+QG PLSSYISINSDTGVLYAL+SFDYEQ  +LQ+ VTASD
Sbjct: 481 LDPDSKENAQIIYSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASD 540

Query: 537 SGDPPLSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDR 596
           SGDPPLSSN+SLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAE GYLVTKVVAVDR
Sbjct: 541 SGDPPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDR 600

Query: 597 DSGQNAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSA 656
           DSGQNAWLSYRLLKASEPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSA
Sbjct: 601 DSGQNAWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSA 660

Query: 657 TVTLTVAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRL 716
           TVTLTVAVADSIP+VL +LGS +   +   S LTLYLVVAVAA+SCVFLAFV VLL  RL
Sbjct: 661 TVTLTVAVADSIPQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRL 720

Query: 717 RRWHKSRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYA 776
           RRWHKSRLLQ SGG L GV  SHFVGV+ V+AFLQTYS EVSLTADSRKSHLIFPQPNYA
Sbjct: 721 RRWHKSRLLQASGGGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYA 780

Query: 777 DMLISQEGCEKNDSL 791
           D LISQE CEKND L
Sbjct: 781 DTLISQESCEKNDPL 795


>gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precursor
           [Homo sapiens]
          Length = 850

 Score = 1150 bits (2975), Expect = 0.0
 Identities = 596/795 (74%), Positives = 658/795 (82%), Gaps = 4/795 (0%)

Query: 1   MAAPQSRPRRGE----LILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDP 56
           MAA ++R +  +    L+LLC   G  WE G  QI YS+PEE +KGSFVGNISKDLGL P
Sbjct: 1   MAAQRNRSKESKDCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAP 60

Query: 57  RKLAKHGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKL 116
           R+LA+ GVRIVSRGRTQLF+LNPRSGSLITAGRIDREELCAQS RC+++ N LVED+ KL
Sbjct: 61  RELAERGVRIVSRGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKL 120

Query: 117 FGVEIEIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNH 176
           FG+EIE+ DINDN PKFQ E+L+VKINE    G R+PLPEA+DPDVGVNSLQSYQLSPN 
Sbjct: 121 FGIEIEVTDINDNAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNK 180

Query: 177 HFSLDVQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTN 236
           HFSL VQ+  NG   PELVLE +LDREEEA HHLVLTASDGG P RS TV + VTV D N
Sbjct: 181 HFSLRVQSRANGVKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDAN 240

Query: 237 DNAPVFPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNE 296
           DNAPVF  P YRV V EN+P GT+LLTVTA+D DEG NG+V Y FRK+ + Q   FQLN+
Sbjct: 241 DNAPVFTLPEYRVSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNK 300

Query: 297 NTGEISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPV 356
            TGEI I+++LDYEE  FYE+EIQAED GA L   K+LI+VEDVNDN PE+ ITSLFSPV
Sbjct: 301 YTGEIKISENLDYEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPV 360

Query: 357 LENSLPGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVS 416
            E+S  GTV+A L+VHD DS +NGQV C     LPFKLEKSI +YYRLV  + LDRE VS
Sbjct: 361 TEDSPLGTVVALLNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVS 420

Query: 417 IYNITVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTA 476
            YNITV A+D G+PPLSTE    L VADINDNPPTF   SY  YI ENN RGASIFS+TA
Sbjct: 421 SYNITVTATDGGSPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTA 480

Query: 477 HDPDSQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASD 536
            DPDS+ENAQ+ YS+ EDT+QG PLSSYISINSDTGVLYAL+SFDYEQ  +LQ+ VTASD
Sbjct: 481 LDPDSKENAQIIYSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASD 540

Query: 537 SGDPPLSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDR 596
           SGDPPLSSN+SLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAE GYLVTKVVAVDR
Sbjct: 541 SGDPPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDR 600

Query: 597 DSGQNAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSA 656
           DSGQNAWLSYRLLKASEPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSA
Sbjct: 601 DSGQNAWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSA 660

Query: 657 TVTLTVAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRL 716
           TVTLTVAVADSIP+VL +LGS +   +   S LTLYLVVAVAA+SCVFLAFV VLL  RL
Sbjct: 661 TVTLTVAVADSIPQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRL 720

Query: 717 RRWHKSRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYA 776
           RRWHKSRLLQ SGG L GV  SHFVGV+ V+AFLQTYS EVSLTADSRKSHLIFPQPNYA
Sbjct: 721 RRWHKSRLLQASGGGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYA 780

Query: 777 DMLISQEGCEKNDSL 791
           D LISQE CEKND L
Sbjct: 781 DTLISQESCEKNDPL 795


>gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precursor
           [Homo sapiens]
          Length = 817

 Score = 1148 bits (2969), Expect = 0.0
 Identities = 594/813 (73%), Positives = 666/813 (81%), Gaps = 3/813 (0%)

Query: 6   SRPRRGE---LILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLAKH 62
           ++PR G+     LL  LLGT WE   G+I YSV EETDKGSFVG+I+KDLGL+PR+LA+ 
Sbjct: 3   AQPRGGDYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAER 62

Query: 63  GVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVEIE 122
           GVRI+SRGRTQLFALN RSGSL+TAGRIDREE+CAQS RCL+N N L+EDK  L+ +++E
Sbjct: 63  GVRIISRGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVE 122

Query: 123 IIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSLDV 182
           IIDINDN P+F  E++ VKI E   PG R+PL EA DPDVG NSLQSYQLSPN HFSL V
Sbjct: 123 IIDINDNVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAV 182

Query: 183 QTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAPVF 242
           Q+GD+    PELVLER LDREEE  HHLVLTASDGG PPRSST  I VTV+D ND+ PVF
Sbjct: 183 QSGDDETKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVF 242

Query: 243 PHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGEIS 302
             P Y+V V EN+P GTRLLTV A D DEG+NG+V Y FRKI  K   +F LN  TGEIS
Sbjct: 243 SLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEIS 302

Query: 303 IAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENSLP 362
             + LDYEE +FYEME+QA+D    L + K+LI+V DVNDN PEV +TSL S + E++  
Sbjct: 303 TLEGLDYEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPL 362

Query: 363 GTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNITV 422
           GTVIA   + D+DSGKNG+V C   +NLPFKLEKSI NYYRLVT K LDRE +S+YNIT+
Sbjct: 363 GTVIALFYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITL 422

Query: 423 MASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPDSQ 482
            A+D GTPPLS ET I + VAD NDNPPTFPH+SYS YI ENN RGASIF +TA D DS+
Sbjct: 423 KATDGGTPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSE 482

Query: 483 ENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDPPL 542
           +NAQ+TYS+ EDT+QGAP+SSY+SINSDTGVLYALQSFDYEQ+R+LQL VTA DSGDPPL
Sbjct: 483 DNAQITYSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPL 542

Query: 543 SSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQNA 602
           SSNMSLSLFVLDQNDN PEILYPALPTDGSTG+ELAPRSAE GYLVTKVVAVD+DSGQNA
Sbjct: 543 SSNMSLSLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNA 602

Query: 603 WLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTV 662
           WLSY LLKASEPGLF+VGL+TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTV
Sbjct: 603 WLSYLLLKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTV 662

Query: 663 AVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWHKS 722
           AVADSIPEVL +LGSL+PS  P +  LTLYLVVAVA +SCVFLAFV VLL LRLRRWHKS
Sbjct: 663 AVADSIPEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKS 722

Query: 723 RLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLISQ 782
           RLLQ S G L  VP SHFVG++ VQAFLQTYS EVSLTADSRKSHLIFPQPNY DMLISQ
Sbjct: 723 RLLQASEGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLISQ 782

Query: 783 EGCEKNDSLLTSVDFHEYKNEADHGQVSLVLCL 815
           E CEKNDSLLTSVDF E K      QVS  L L
Sbjct: 783 ESCEKNDSLLTSVDFQECKENLPSIQVSPALPL 815


>gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 1145 bits (2961), Expect = 0.0
 Identities = 589/799 (73%), Positives = 661/799 (82%), Gaps = 3/799 (0%)

Query: 6   SRPRRGE---LILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLAKH 62
           ++PR G+     LL  LLGT WE   G+I YSV EETDKGSFVG+I+KDLGL+PR+LA+ 
Sbjct: 3   AQPRGGDYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAER 62

Query: 63  GVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVEIE 122
           GVRI+SRGRTQLFALN RSGSL+TAGRIDREE+CAQS RCL+N N L+EDK  L+ +++E
Sbjct: 63  GVRIISRGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVE 122

Query: 123 IIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSLDV 182
           IIDINDN P+F  E++ VKI E   PG R+PL EA DPDVG NSLQSYQLSPN HFSL V
Sbjct: 123 IIDINDNVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAV 182

Query: 183 QTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAPVF 242
           Q+GD+    PELVLER LDREEE  HHLVLTASDGG PPRSST  I VTV+D ND+ PVF
Sbjct: 183 QSGDDETKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVF 242

Query: 243 PHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGEIS 302
             P Y+V V EN+P GTRLLTV A D DEG+NG+V Y FRKI  K   +F LN  TGEIS
Sbjct: 243 SLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEIS 302

Query: 303 IAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENSLP 362
             + LDYEE +FYEME+QA+D    L + K+LI+V DVNDN PEV +TSL S + E++  
Sbjct: 303 TLEGLDYEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPL 362

Query: 363 GTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNITV 422
           GTVIA   + D+DSGKNG+V C   +NLPFKLEKSI NYYRLVT K LDRE +S+YNIT+
Sbjct: 363 GTVIALFYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITL 422

Query: 423 MASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPDSQ 482
            A+D GTPPLS ET I + VAD NDNPPTFPH+SYS YI ENN RGASIF +TA D DS+
Sbjct: 423 KATDGGTPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSE 482

Query: 483 ENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDPPL 542
           +NAQ+TYS+ EDT+QGAP+SSY+SINSDTGVLYALQSFDYEQ+R+LQL VTA DSGDPPL
Sbjct: 483 DNAQITYSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPL 542

Query: 543 SSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQNA 602
           SSNMSLSLFVLDQNDN PEILYPALPTDGSTG+ELAPRSAE GYLVTKVVAVD+DSGQNA
Sbjct: 543 SSNMSLSLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNA 602

Query: 603 WLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTV 662
           WLSY LLKASEPGLF+VGL+TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTV
Sbjct: 603 WLSYLLLKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTV 662

Query: 663 AVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWHKS 722
           AVADSIPEVL +LGSL+PS  P +  LTLYLVVAVA +SCVFLAFV VLL LRLRRWHKS
Sbjct: 663 AVADSIPEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKS 722

Query: 723 RLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLISQ 782
           RLLQ S G L  VP SHFVG++ VQAFLQTYS EVSLTADSRKSHLIFPQPNY DMLISQ
Sbjct: 723 RLLQASEGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLISQ 782

Query: 783 EGCEKNDSLLTSVDFHEYK 801
           E CEKNDSLLTSVDF E K
Sbjct: 783 ESCEKNDSLLTSVDFQECK 801


>gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precursor
           [Homo sapiens]
          Length = 818

 Score = 1138 bits (2944), Expect = 0.0
 Identities = 583/810 (71%), Positives = 666/810 (82%)

Query: 1   MAAPQSRPRRGELILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLA 60
           MA PQ  P+R E +LL  LLGTLW     QIRYS+PEE +KGSFVGNI KDLGL+P++LA
Sbjct: 1   MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA 60

Query: 61  KHGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVE 120
           +HGVRIVSRGR QLF+LNPR+GSL+TAGRIDREELCAQSPRCL++ N LVEDK  L+ VE
Sbjct: 61  EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE 120

Query: 121 IEIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSL 180
           +EI+DINDN P+F  E+LEVKI E A P +R+PL E  DPDVG+NSLQ ++LS N HFS+
Sbjct: 121 VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV 180

Query: 181 DVQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAP 240
           DVQ+  +G   PELVLE  LDRE EA + LVLTA DGG P RSS  +I VTVLD NDN P
Sbjct: 181 DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP 240

Query: 241 VFPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGE 300
           +F  P+YRV V EN+P GT +L VTA+D DEG++G+V Y F KI EK + +F LN  TGE
Sbjct: 241 MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE 300

Query: 301 ISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENS 360
           IS + +LDYE+ SFYE+ ++A D   L  R K+LI++ DVNDN PEV++TS    + E++
Sbjct: 301 ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA 360

Query: 361 LPGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNI 420
            PGTVIA   V D+DSG NG V C    +LPF+LEKS+GNYYRLVT   LDRE V +YNI
Sbjct: 361 PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI 420

Query: 421 TVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPD 480
           TV A+D GTPPLSTET I+L+VAD NDNPPTFPH+SYS Y+LENN RGASIFS+ A DPD
Sbjct: 421 TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD 480

Query: 481 SQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDP 540
             +NAQV+YS+ EDTLQGAPLSSY+SINSDTG+LYAL+SFDYEQ+RDLQL VTASDSGDP
Sbjct: 481 VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP 540

Query: 541 PLSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQ 600
           PLSSN+SLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAE GYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
           NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660

Query: 661 TVAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWH 720
           TVAVAD IP++L +LGSL+PS  PNDS LTLYLVVAVAA+SCVFLAFV VLL LRL+RWH
Sbjct: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWH 720

Query: 721 KSRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLI 780
           KSRLLQ SGG L  +P SHFVGVE V+AFLQTYS EVSLTADSRKSHLIFPQPNYAD LI
Sbjct: 721 KSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780

Query: 781 SQEGCEKNDSLLTSVDFHEYKNEADHGQVS 810
           +QE  EK++ LL + D  E K E    QVS
Sbjct: 781 NQESYEKSEPLLITQDLLETKGEPRQLQVS 810


>gi|14196465 protocadherin gamma subfamily A, 3 isoform 2 precursor
           [Homo sapiens]
          Length = 829

 Score = 1137 bits (2942), Expect = 0.0
 Identities = 584/805 (72%), Positives = 661/805 (82%)

Query: 13  LILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLAKHGVRIVSRGRT 72
           L LLCALLGTL E G GQIRYSV EE DKGSFVGNI+ DLGL+PR+LA+ GVRIVSRGRT
Sbjct: 13  LALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGRT 72

Query: 73  QLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVEIEIIDINDNNPK 132
           QLF+LNP+SGSL+TA RIDREELCAQ P CL+ IN LVEDK K+F VEIEI DINDN P 
Sbjct: 73  QLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAPN 132

Query: 133 FQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSLDVQTGDNGAINP 192
           F  E+LE+KI E+ VPG R+P+  A DPDVG+NSLQ+Y+LSPN +FSL V +   GA  P
Sbjct: 133 FPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKYP 192

Query: 193 ELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAPVFPHPIYRVKVL 252
           ELVLERALDRE++  H LVL ASDGG P  S  + I V VLD NDN P+F  P YRV V 
Sbjct: 193 ELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVW 252

Query: 253 ENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGEISIAKSLDYEEC 312
           EN+P GTRLLTV A+DPDEG N +V+Y   K+  K   +F LN  +GE+SI KSLDYE+ 
Sbjct: 253 ENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDA 312

Query: 313 SFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENSLPGTVIAFLSVH 372
            FYE++I+A+D   LL R K+L++V DVNDN PE+ ITSL S V E    G  IA + VH
Sbjct: 313 MFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVH 372

Query: 373 DQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNITVMASDLGTPPL 432
           D+DSG+NGQV  +   NLPFKLEKSI  YYRLVT   LDRE +S YNI++ ASD G+PPL
Sbjct: 373 DRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPL 432

Query: 433 STETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPDSQENAQVTYSVT 492
           STET I LHV DINDNPPTFPH SYSAYI ENN RGASIFS+TA DPDS  NA++TY++T
Sbjct: 433 STETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALT 492

Query: 493 EDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDPPLSSNMSLSLFV 552
           EDTLQGAPLSS++SINS+TGVLYAL+SFDYEQ RDL+LLVTASDSG+PPLSSN+SL+LFV
Sbjct: 493 EDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFV 552

Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
           LDQNDNAPEILYPALPTDGSTGVELAPRSAE GYLVTKVVAVDRDSGQNAWLSYRLLKAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612

Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVL 672
           EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD IP++L
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDIL 672

Query: 673 TELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWHKSRLLQDSGGRL 732
            +LGSL+PS  PNDS LTLYLVVAVAA+SCVFLAFV VLL LRLRRWHKSRLLQ SGG L
Sbjct: 673 ADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGGL 732

Query: 733 VGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLISQEGCEKNDSLL 792
              P SHFVG + V+AFLQTYS EVSLTADSRKSHLIFPQPNYAD LISQE CEK++ LL
Sbjct: 733 ASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEPLL 792

Query: 793 TSVDFHEYKNEADHGQVSLVLCLLL 817
            + D  E K +++  QVSL + L++
Sbjct: 793 ITQDLLEMKGDSNLLQVSLFISLII 817


>gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 1136 bits (2938), Expect = 0.0
 Identities = 580/803 (72%), Positives = 663/803 (82%)

Query: 1   MAAPQSRPRRGELILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLA 60
           MA PQ  P+R E +LL  LLGTLW     QIRYS+PEE +KGSFVGNI KDLGL+P++LA
Sbjct: 1   MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA 60

Query: 61  KHGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVE 120
           +HGVRIVSRGR QLF+LNPR+GSL+TAGRIDREELCAQSPRCL++ N LVEDK  L+ VE
Sbjct: 61  EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE 120

Query: 121 IEIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSL 180
           +EI+DINDN P+F  E+LEVKI E A P +R+PL E  DPDVG+NSLQ ++LS N HFS+
Sbjct: 121 VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV 180

Query: 181 DVQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAP 240
           DVQ+  +G   PELVLE  LDRE EA + LVLTA DGG P RSS  +I VTVLD NDN P
Sbjct: 181 DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP 240

Query: 241 VFPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGE 300
           +F  P+YRV V EN+P GT +L VTA+D DEG++G+V Y F KI EK + +F LN  TGE
Sbjct: 241 MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE 300

Query: 301 ISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENS 360
           IS + +LDYE+ SFYE+ ++A D   L  R K+LI++ DVNDN PEV++TS    + E++
Sbjct: 301 ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA 360

Query: 361 LPGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNI 420
            PGTVIA   V D+DSG NG V C    +LPF+LEKS+GNYYRLVT   LDRE V +YNI
Sbjct: 361 PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI 420

Query: 421 TVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPD 480
           TV A+D GTPPLSTET I+L+VAD NDNPPTFPH+SYS Y+LENN RGASIFS+ A DPD
Sbjct: 421 TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD 480

Query: 481 SQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDP 540
             +NAQV+YS+ EDTLQGAPLSSY+SINSDTG+LYAL+SFDYEQ+RDLQL VTASDSGDP
Sbjct: 481 VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP 540

Query: 541 PLSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQ 600
           PLSSN+SLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAE GYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
           NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660

Query: 661 TVAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWH 720
           TVAVAD IP++L +LGSL+PS  PNDS LTLYLVVAVAA+SCVFLAFV VLL LRL+RWH
Sbjct: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWH 720

Query: 721 KSRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLI 780
           KSRLLQ SGG L  +P SHFVGVE V+AFLQTYS EVSLTADSRKSHLIFPQPNYAD LI
Sbjct: 721 KSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780

Query: 781 SQEGCEKNDSLLTSVDFHEYKNE 803
           +QE  EK++ LL + D  E K E
Sbjct: 781 NQESYEKSEPLLITQDLLETKGE 803


>gi|14196468 protocadherin gamma subfamily A, 4 isoform 2 precursor
           [Homo sapiens]
          Length = 820

 Score = 1132 bits (2927), Expect = 0.0
 Identities = 577/803 (71%), Positives = 656/803 (81%)

Query: 1   MAAPQSRPRRGELILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLA 60
           MAAP +RP    L+ +C LLG L EI   QI YSV EE ++GS VGNI+KDLGL PR+LA
Sbjct: 1   MAAPPARPDHTRLLQICLLLGVLVEIRAEQILYSVFEEQEEGSVVGNIAKDLGLAPRELA 60

Query: 61  KHGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVE 120
           + GVRIVSRGRTQLFALNPRSG+L+TAGRIDREELC +SP C+ N+  L+ED  K+  VE
Sbjct: 61  ERGVRIVSRGRTQLFALNPRSGTLVTAGRIDREELCDRSPNCVTNLEILLEDTVKILRVE 120

Query: 121 IEIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSL 180
           +EIID+NDN P F  E  E+K+ E   PGAR+PLPEA DPDVGVNSLQ YQL+ N +FSL
Sbjct: 121 VEIIDVNDNPPSFGTEQREIKVAENENPGARFPLPEAFDPDVGVNSLQGYQLNSNGYFSL 180

Query: 181 DVQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAP 240
           DVQ+G +G   PELVLERALDREEEA HHLVLTA DGG P RS T RI + ++DTNDNAP
Sbjct: 181 DVQSGADGIKYPELVLERALDREEEAVHHLVLTAFDGGDPVRSGTARILIILVDTNDNAP 240

Query: 241 VFPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGE 300
           VF  P Y V V EN+P GTRLLTV A+DPDEG NG V Y FRK+ +K + LFQLN  +G+
Sbjct: 241 VFTQPEYHVSVRENVPVGTRLLTVKATDPDEGANGDVTYSFRKVRDKISQLFQLNSLSGD 300

Query: 301 ISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENS 360
           I+I   LDYE+  FY+++++A D   L  R+K+L++V D NDN PEV +TSL S V E+S
Sbjct: 301 ITILGGLDYEDSGFYDIDVEAHDGPGLRARSKVLVTVLDENDNAPEVTVTSLTSSVQESS 360

Query: 361 LPGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNI 420
            PGTVIA  +VHD DSG NG V C   DNLPF LEK+ GNYYRL+T + LDRE VS YNI
Sbjct: 361 SPGTVIALFNVHDSDSGGNGLVTCSIPDNLPFTLEKTYGNYYRLLTHRTLDREEVSEYNI 420

Query: 421 TVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPD 480
           TV A+D GTPPLSTET I+L V DINDNPPTFPHASYSAYI ENN RGASI S+TA DPD
Sbjct: 421 TVTATDQGTPPLSTETHISLQVMDINDNPPTFPHASYSAYIPENNPRGASILSMTAQDPD 480

Query: 481 SQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDP 540
           S +NA++TYS+ EDT QGAPLSSY+SINS+TG+LYAL SFDYEQ RDLQLL+TASDSGDP
Sbjct: 481 SGDNARITYSLAEDTFQGAPLSSYVSINSNTGILYALCSFDYEQFRDLQLLMTASDSGDP 540

Query: 541 PLSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQ 600
           PLSSN+SLSLFVLDQNDN PEILYP  PTDGSTGVELAPRSA+ GYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNVPEILYPTFPTDGSTGVELAPRSADSGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
           NAWLSY LLK+SEPGLF+VGLHTGEVRTARALLDRDALKQ LVV VQDHGQPPLSATVTL
Sbjct: 601 NAWLSYSLLKSSEPGLFAVGLHTGEVRTARALLDRDALKQRLVVVVQDHGQPPLSATVTL 660

Query: 661 TVAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWH 720
           TVAVADSIP+VL +LGSLKPS DP+DS LTLYLVVAVAA+SCVFLAFV VLL L+LRRWH
Sbjct: 661 TVAVADSIPDVLADLGSLKPSADPDDSGLTLYLVVAVAAVSCVFLAFVTVLLALKLRRWH 720

Query: 721 KSRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLI 780
           KSRLL   G RL GVPASHFVGV+ V+AFLQTYS EVSLTADSRKSHLIF QP+YAD LI
Sbjct: 721 KSRLLHAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFSQPSYADTLI 780

Query: 781 SQEGCEKNDSLLTSVDFHEYKNE 803
           S+E CEK++ LL + D  E K +
Sbjct: 781 SRESCEKSEPLLITQDLLETKGD 803


>gi|11056026 protocadherin gamma subfamily A, 4 isoform 1 precursor
           [Homo sapiens]
          Length = 931

 Score = 1132 bits (2927), Expect = 0.0
 Identities = 577/803 (71%), Positives = 656/803 (81%)

Query: 1   MAAPQSRPRRGELILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLA 60
           MAAP +RP    L+ +C LLG L EI   QI YSV EE ++GS VGNI+KDLGL PR+LA
Sbjct: 1   MAAPPARPDHTRLLQICLLLGVLVEIRAEQILYSVFEEQEEGSVVGNIAKDLGLAPRELA 60

Query: 61  KHGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVE 120
           + GVRIVSRGRTQLFALNPRSG+L+TAGRIDREELC +SP C+ N+  L+ED  K+  VE
Sbjct: 61  ERGVRIVSRGRTQLFALNPRSGTLVTAGRIDREELCDRSPNCVTNLEILLEDTVKILRVE 120

Query: 121 IEIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSL 180
           +EIID+NDN P F  E  E+K+ E   PGAR+PLPEA DPDVGVNSLQ YQL+ N +FSL
Sbjct: 121 VEIIDVNDNPPSFGTEQREIKVAENENPGARFPLPEAFDPDVGVNSLQGYQLNSNGYFSL 180

Query: 181 DVQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAP 240
           DVQ+G +G   PELVLERALDREEEA HHLVLTA DGG P RS T RI + ++DTNDNAP
Sbjct: 181 DVQSGADGIKYPELVLERALDREEEAVHHLVLTAFDGGDPVRSGTARILIILVDTNDNAP 240

Query: 241 VFPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGE 300
           VF  P Y V V EN+P GTRLLTV A+DPDEG NG V Y FRK+ +K + LFQLN  +G+
Sbjct: 241 VFTQPEYHVSVRENVPVGTRLLTVKATDPDEGANGDVTYSFRKVRDKISQLFQLNSLSGD 300

Query: 301 ISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENS 360
           I+I   LDYE+  FY+++++A D   L  R+K+L++V D NDN PEV +TSL S V E+S
Sbjct: 301 ITILGGLDYEDSGFYDIDVEAHDGPGLRARSKVLVTVLDENDNAPEVTVTSLTSSVQESS 360

Query: 361 LPGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNI 420
            PGTVIA  +VHD DSG NG V C   DNLPF LEK+ GNYYRL+T + LDRE VS YNI
Sbjct: 361 SPGTVIALFNVHDSDSGGNGLVTCSIPDNLPFTLEKTYGNYYRLLTHRTLDREEVSEYNI 420

Query: 421 TVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPD 480
           TV A+D GTPPLSTET I+L V DINDNPPTFPHASYSAYI ENN RGASI S+TA DPD
Sbjct: 421 TVTATDQGTPPLSTETHISLQVMDINDNPPTFPHASYSAYIPENNPRGASILSMTAQDPD 480

Query: 481 SQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDP 540
           S +NA++TYS+ EDT QGAPLSSY+SINS+TG+LYAL SFDYEQ RDLQLL+TASDSGDP
Sbjct: 481 SGDNARITYSLAEDTFQGAPLSSYVSINSNTGILYALCSFDYEQFRDLQLLMTASDSGDP 540

Query: 541 PLSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQ 600
           PLSSN+SLSLFVLDQNDN PEILYP  PTDGSTGVELAPRSA+ GYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNVPEILYPTFPTDGSTGVELAPRSADSGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
           NAWLSY LLK+SEPGLF+VGLHTGEVRTARALLDRDALKQ LVV VQDHGQPPLSATVTL
Sbjct: 601 NAWLSYSLLKSSEPGLFAVGLHTGEVRTARALLDRDALKQRLVVVVQDHGQPPLSATVTL 660

Query: 661 TVAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWH 720
           TVAVADSIP+VL +LGSLKPS DP+DS LTLYLVVAVAA+SCVFLAFV VLL L+LRRWH
Sbjct: 661 TVAVADSIPDVLADLGSLKPSADPDDSGLTLYLVVAVAAVSCVFLAFVTVLLALKLRRWH 720

Query: 721 KSRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLI 780
           KSRLL   G RL GVPASHFVGV+ V+AFLQTYS EVSLTADSRKSHLIF QP+YAD LI
Sbjct: 721 KSRLLHAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFSQPSYADTLI 780

Query: 781 SQEGCEKNDSLLTSVDFHEYKNE 803
           S+E CEK++ LL + D  E K +
Sbjct: 781 SRESCEKSEPLLITQDLLETKGD 803


>gi|14589880 protocadherin gamma subfamily A, 3 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 1130 bits (2924), Expect = 0.0
 Identities = 579/793 (73%), Positives = 653/793 (82%)

Query: 13  LILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLAKHGVRIVSRGRT 72
           L LLCALLGTL E G GQIRYSV EE DKGSFVGNI+ DLGL+PR+LA+ GVRIVSRGRT
Sbjct: 13  LALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGRT 72

Query: 73  QLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVEIEIIDINDNNPK 132
           QLF+LNP+SGSL+TA RIDREELCAQ P CL+ IN LVEDK K+F VEIEI DINDN P 
Sbjct: 73  QLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAPN 132

Query: 133 FQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSLDVQTGDNGAINP 192
           F  E+LE+KI E+ VPG R+P+  A DPDVG+NSLQ+Y+LSPN +FSL V +   GA  P
Sbjct: 133 FPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKYP 192

Query: 193 ELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAPVFPHPIYRVKVL 252
           ELVLERALDRE++  H LVL ASDGG P  S  + I V VLD NDN P+F  P YRV V 
Sbjct: 193 ELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVW 252

Query: 253 ENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGEISIAKSLDYEEC 312
           EN+P GTRLLTV A+DPDEG N +V+Y   K+  K   +F LN  +GE+SI KSLDYE+ 
Sbjct: 253 ENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDA 312

Query: 313 SFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENSLPGTVIAFLSVH 372
            FYE++I+A+D   LL R K+L++V DVNDN PE+ ITSL S V E    G  IA + VH
Sbjct: 313 MFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVH 372

Query: 373 DQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNITVMASDLGTPPL 432
           D+DSG+NGQV  +   NLPFKLEKSI  YYRLVT   LDRE +S YNI++ ASD G+PPL
Sbjct: 373 DRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPL 432

Query: 433 STETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPDSQENAQVTYSVT 492
           STET I LHV DINDNPPTFPH SYSAYI ENN RGASIFS+TA DPDS  NA++TY++T
Sbjct: 433 STETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALT 492

Query: 493 EDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDPPLSSNMSLSLFV 552
           EDTLQGAPLSS++SINS+TGVLYAL+SFDYEQ RDL+LLVTASDSG+PPLSSN+SL+LFV
Sbjct: 493 EDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFV 552

Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
           LDQNDNAPEILYPALPTDGSTGVELAPRSAE GYLVTKVVAVDRDSGQNAWLSYRLLKAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612

Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVL 672
           EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD IP++L
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDIL 672

Query: 673 TELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWHKSRLLQDSGGRL 732
            +LGSL+PS  PNDS LTLYLVVAVAA+SCVFLAFV VLL LRLRRWHKSRLLQ SGG L
Sbjct: 673 ADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGGL 732

Query: 733 VGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLISQEGCEKNDSLL 792
              P SHFVG + V+AFLQTYS EVSLTADSRKSHLIFPQPNYAD LISQE CEK++ LL
Sbjct: 733 ASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEPLL 792

Query: 793 TSVDFHEYKNEAD 805
            + D  E K +++
Sbjct: 793 ITQDLLEMKGDSN 805


>gi|14196471 protocadherin gamma subfamily A, 5 isoform 2 precursor
           [Homo sapiens]
          Length = 813

 Score = 1126 bits (2912), Expect = 0.0
 Identities = 578/803 (71%), Positives = 658/803 (81%)

Query: 1   MAAPQSRPRRGELILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLA 60
           MA+P      GEL+L   LLGTL E G GQIRYS+PEE DKGSFVGNI+KDLGL+P++LA
Sbjct: 1   MASPPRGWGCGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELA 60

Query: 61  KHGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVE 120
           + GVRIVSRGRTQLFALNPRSGSL+TAGRIDREELCAQSP C++N N LVE+K K++GVE
Sbjct: 61  ERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVE 120

Query: 121 IEIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSL 180
           +EIIDINDN P+F+ E+L+VK+NE A  G R  LP A D DVGVNSL+SYQLS N HFSL
Sbjct: 121 VEIIDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSL 180

Query: 181 DVQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAP 240
           DV +G +G   PELVLE+ LDRE+E  H L+LTA DGG P  S T  I VTVLD NDNAP
Sbjct: 181 DVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAP 240

Query: 241 VFPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGE 300
           +F    Y V V EN+P GTRLL +TA+DPDEGINGK+ Y FR   EK +  FQL+ N GE
Sbjct: 241 LFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGE 300

Query: 301 ISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENS 360
           IS  +SLDYEE  FY ME+ A+D GAL+   K++++V+DVNDN PEVI+TSL S + E+ 
Sbjct: 301 ISTLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDC 360

Query: 361 LPGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNI 420
           LPGTVIA  SVHD DSG+NG++ C    NLPFKLEKS+ NYY L+T + LDRE  S YNI
Sbjct: 361 LPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNI 420

Query: 421 TVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPD 480
           T+   D GTPPLSTE+ I L VAD+NDNPP FP ASYS  + ENN RG SIFS+TAHDPD
Sbjct: 421 TLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPD 480

Query: 481 SQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDP 540
           S +NA+VTYS+ EDT QGAPLSSY+SINSDTGVLYAL+SFDYEQ+RDLQL VTASDSG+P
Sbjct: 481 SGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNP 540

Query: 541 PLSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQ 600
           PLSSN+SLSLFVLDQNDN PEILYPALPTDGSTGVELAPRSAE GYLVTKVVAVD+DSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQ 600

Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
           NAWLSYRLLKASEPGLF+VGLHTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+
Sbjct: 601 NAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTV 660

Query: 661 TVAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWH 720
           TVAVAD IP++L +LGS+K  +DP D  LTLYLVVAVAA+SCVFLAFV VLL LRLRRWH
Sbjct: 661 TVAVADRIPDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWH 720

Query: 721 KSRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLI 780
           KSRLLQ  G RL GVPASHFVGV+ V+AFLQTYS EVSLTADSRKSHLIFPQPNYAD L+
Sbjct: 721 KSRLLQAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLL 780

Query: 781 SQEGCEKNDSLLTSVDFHEYKNE 803
           S+E CEK++ LL S      K E
Sbjct: 781 SEESCEKSEPLLMSDKVDANKEE 803


>gi|11056024 protocadherin gamma subfamily A, 5 isoform 1 precursor
           [Homo sapiens]
          Length = 931

 Score = 1126 bits (2912), Expect = 0.0
 Identities = 578/803 (71%), Positives = 658/803 (81%)

Query: 1   MAAPQSRPRRGELILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLA 60
           MA+P      GEL+L   LLGTL E G GQIRYS+PEE DKGSFVGNI+KDLGL+P++LA
Sbjct: 1   MASPPRGWGCGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELA 60

Query: 61  KHGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVE 120
           + GVRIVSRGRTQLFALNPRSGSL+TAGRIDREELCAQSP C++N N LVE+K K++GVE
Sbjct: 61  ERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVE 120

Query: 121 IEIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSL 180
           +EIIDINDN P+F+ E+L+VK+NE A  G R  LP A D DVGVNSL+SYQLS N HFSL
Sbjct: 121 VEIIDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSL 180

Query: 181 DVQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAP 240
           DV +G +G   PELVLE+ LDRE+E  H L+LTA DGG P  S T  I VTVLD NDNAP
Sbjct: 181 DVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAP 240

Query: 241 VFPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGE 300
           +F    Y V V EN+P GTRLL +TA+DPDEGINGK+ Y FR   EK +  FQL+ N GE
Sbjct: 241 LFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGE 300

Query: 301 ISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENS 360
           IS  +SLDYEE  FY ME+ A+D GAL+   K++++V+DVNDN PEVI+TSL S + E+ 
Sbjct: 301 ISTLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDC 360

Query: 361 LPGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNI 420
           LPGTVIA  SVHD DSG+NG++ C    NLPFKLEKS+ NYY L+T + LDRE  S YNI
Sbjct: 361 LPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNI 420

Query: 421 TVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPD 480
           T+   D GTPPLSTE+ I L VAD+NDNPP FP ASYS  + ENN RG SIFS+TAHDPD
Sbjct: 421 TLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPD 480

Query: 481 SQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDP 540
           S +NA+VTYS+ EDT QGAPLSSY+SINSDTGVLYAL+SFDYEQ+RDLQL VTASDSG+P
Sbjct: 481 SGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNP 540

Query: 541 PLSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQ 600
           PLSSN+SLSLFVLDQNDN PEILYPALPTDGSTGVELAPRSAE GYLVTKVVAVD+DSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQ 600

Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
           NAWLSYRLLKASEPGLF+VGLHTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+
Sbjct: 601 NAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTV 660

Query: 661 TVAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWH 720
           TVAVAD IP++L +LGS+K  +DP D  LTLYLVVAVAA+SCVFLAFV VLL LRLRRWH
Sbjct: 661 TVAVADRIPDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWH 720

Query: 721 KSRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLI 780
           KSRLLQ  G RL GVPASHFVGV+ V+AFLQTYS EVSLTADSRKSHLIFPQPNYAD L+
Sbjct: 721 KSRLLQAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLL 780

Query: 781 SQEGCEKNDSLLTSVDFHEYKNE 803
           S+E CEK++ LL S      K E
Sbjct: 781 SEESCEKSEPLLMSDKVDANKEE 803


>gi|14196457 protocadherin gamma subfamily A, 12 isoform 2 precursor
           [Homo sapiens]
          Length = 820

 Score = 1107 bits (2864), Expect = 0.0
 Identities = 570/801 (71%), Positives = 655/801 (81%), Gaps = 2/801 (0%)

Query: 13  LILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLAKHGVRIVSRGRT 72
           L+LL  LLGTLWE G  QIRYSVPEE +KGS VG+IS+DLGL+PR+LA+ GVRI+ RGRT
Sbjct: 13  LVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRT 72

Query: 73  QLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVEIEIIDINDNNPK 132
           QLFALNPRSGSL+TAGRIDREELC  + +C +N++ L+EDK K++GVE+E+ DINDN P 
Sbjct: 73  QLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPY 132

Query: 133 FQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSLDVQTGDNGAINP 192
           F+  +LE+KI+E A    R+PLP A DPD+G NSLQSY+LSPN HFSL VQ G +G+  P
Sbjct: 133 FRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYP 192

Query: 193 ELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAPVFPHPIYRVKVL 252
           ELVL+RALDREE+AAHHLVLTASDGG P R+ T RI V VLD NDNAP F  P YR  V 
Sbjct: 193 ELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVP 252

Query: 253 ENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGEISIAKSLDYEEC 312
           EN+  GT+LL V A+DPDEG+N +V Y FR +++K   +F+L+ N+G IS    LD+EE 
Sbjct: 253 ENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHEES 312

Query: 313 SFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENSLPGTVIAFLSVH 372
            FY+ME+QA D      R K+LI+V DVNDN PEV++TSL S V ENS  GT+IA L+V+
Sbjct: 313 GFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNVN 372

Query: 373 DQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNITVMASDLGTPPL 432
           DQDS +NGQV+C+ + NLPFKLEKS GNYY LVT   LDRE V  YNITV A+D GTPPL
Sbjct: 373 DQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPPL 432

Query: 433 STETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPDSQENAQVTYSVT 492
           STET I+L+VAD NDNPP FP ASYSAYI ENN RG S+ S+TAHDPD +ENAQ+TYS+ 
Sbjct: 433 STETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLA 492

Query: 493 EDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDPPLSSNMSLSLFV 552
           E+T+QGA LSSY+SINSDTGVLYAL SFDYEQ RDLQ+ V A D+G PPLSSN+SLSLFV
Sbjct: 493 ENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFV 552

Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
           LDQNDNAPEILYPALPTDGSTGVELAPRSAE GYLVTKVVAVDRDSGQNAWLSYRLLKAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612

Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVL 672
           EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIP+VL
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVL 672

Query: 673 TELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWHKSRLLQDSGGRL 732
            +LGSL+   +   S LTLYLVVAVAA+SCVFLAFV +LL LRLRRWHKSRLLQ SGG L
Sbjct: 673 ADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQASGGGL 732

Query: 733 VGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLISQEGCEKNDSLL 792
            G PASHFVGV+ VQAFLQTYS EVSLT DSRKSHLIFPQPNYADML+SQE  EK++ LL
Sbjct: 733 TGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEKSEPLL 792

Query: 793 TSVDFHEYKNEADHGQVSLVL 813
            S D     ++  HG + + L
Sbjct: 793 LSGD--SVFSKDSHGLIEVSL 811


>gi|8850232 protocadherin gamma subfamily A, 12 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 1107 bits (2863), Expect = 0.0
 Identities = 567/784 (72%), Positives = 648/784 (82%)

Query: 13  LILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLAKHGVRIVSRGRT 72
           L+LL  LLGTLWE G  QIRYSVPEE +KGS VG+IS+DLGL+PR+LA+ GVRI+ RGRT
Sbjct: 13  LVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRT 72

Query: 73  QLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVEIEIIDINDNNPK 132
           QLFALNPRSGSL+TAGRIDREELC  + +C +N++ L+EDK K++GVE+E+ DINDN P 
Sbjct: 73  QLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPY 132

Query: 133 FQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSLDVQTGDNGAINP 192
           F+  +LE+KI+E A    R+PLP A DPD+G NSLQSY+LSPN HFSL VQ G +G+  P
Sbjct: 133 FRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYP 192

Query: 193 ELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAPVFPHPIYRVKVL 252
           ELVL+RALDREE+AAHHLVLTASDGG P R+ T RI V VLD NDNAP F  P YR  V 
Sbjct: 193 ELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVP 252

Query: 253 ENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGEISIAKSLDYEEC 312
           EN+  GT+LL V A+DPDEG+N +V Y FR +++K   +F+L+ N+G IS    LD+EE 
Sbjct: 253 ENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHEES 312

Query: 313 SFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENSLPGTVIAFLSVH 372
            FY+ME+QA D      R K+LI+V DVNDN PEV++TSL S V ENS  GT+IA L+V+
Sbjct: 313 GFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNVN 372

Query: 373 DQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNITVMASDLGTPPL 432
           DQDS +NGQV+C+ + NLPFKLEKS GNYY LVT   LDRE V  YNITV A+D GTPPL
Sbjct: 373 DQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPPL 432

Query: 433 STETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPDSQENAQVTYSVT 492
           STET I+L+VAD NDNPP FP ASYSAYI ENN RG S+ S+TAHDPD +ENAQ+TYS+ 
Sbjct: 433 STETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLA 492

Query: 493 EDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDPPLSSNMSLSLFV 552
           E+T+QGA LSSY+SINSDTGVLYAL SFDYEQ RDLQ+ V A D+G PPLSSN+SLSLFV
Sbjct: 493 ENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFV 552

Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
           LDQNDNAPEILYPALPTDGSTGVELAPRSAE GYLVTKVVAVDRDSGQNAWLSYRLLKAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612

Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVL 672
           EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIP+VL
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVL 672

Query: 673 TELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWHKSRLLQDSGGRL 732
            +LGSL+   +   S LTLYLVVAVAA+SCVFLAFV +LL LRLRRWHKSRLLQ SGG L
Sbjct: 673 ADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQASGGGL 732

Query: 733 VGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLISQEGCEKNDSLL 792
            G PASHFVGV+ VQAFLQTYS EVSLT DSRKSHLIFPQPNYADML+SQE  EK++ LL
Sbjct: 733 TGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEKSEPLL 792

Query: 793 TSVD 796
            S D
Sbjct: 793 LSGD 796


>gi|14196451 protocadherin gamma subfamily A, 11 isoform 2 precursor
           [Homo sapiens]
          Length = 837

 Score = 1103 bits (2853), Expect = 0.0
 Identities = 564/795 (70%), Positives = 654/795 (82%), Gaps = 4/795 (0%)

Query: 6   SRPRRGE----LILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLAK 61
           +R +RG+    L+LLC  LGTL      QIRYSVPEET+KGSFVGNISKDLGL+PR+LAK
Sbjct: 3   NRLQRGDRSRLLLLLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPRELAK 62

Query: 62  HGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVEI 121
            GVRIVSRG+TQLFA+NPRSGSLITAGRIDREELC     C +N+  LVED  K++GVE+
Sbjct: 63  RGVRIVSRGKTQLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGVEV 122

Query: 122 EIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSLD 181
           EIIDINDN P FQ +++E+K++E A+PGAR+ LP A DPDVGVNSLQSYQLSPN++FSL 
Sbjct: 123 EIIDINDNAPSFQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFSLQ 182

Query: 182 VQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAPV 241
           ++   +GA NPELVLE +LDRE+EAAH L+LTA DGG P R   V I V VLD ND+ P+
Sbjct: 183 LRGRTDGAKNPELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHIPM 242

Query: 242 FPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGEI 301
           F   +YRV V EN+  GTR+L V A+DPDEGING+V Y FR +  K + +FQL+  TGE+
Sbjct: 243 FTQSVYRVSVPENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTGEV 302

Query: 302 SIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENSL 361
            +  SLD+E+  FYEMEIQ +D G L   T +LI+V DVNDN PE+ ITS  + +LENS 
Sbjct: 303 QVRGSLDFEKYRFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILENSP 362

Query: 362 PGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNIT 421
           PGTVIA L+V DQDSG+NGQV C+  ++LPFKLEK+ GNYY+L+T + LDRE V  YNIT
Sbjct: 363 PGTVIALLNVQDQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYNIT 422

Query: 422 VMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPDS 481
           + A+D G+PPLS ET + L+VAD NDNPP FPH+SYSAYI ENN RGASIFS+TA DPDS
Sbjct: 423 LTATDQGSPPLSAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDPDS 482

Query: 482 QENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDPP 541
           ++NA VTYS+T+DT+QG PLSSY+SINS+TGVLYALQSFDYEQ RDL+L V A DSGDPP
Sbjct: 483 KQNALVTYSLTDDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGDPP 542

Query: 542 LSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQN 601
           LSSN+SLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAE GYLVTKVVAVD+DSGQN
Sbjct: 543 LSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQN 602

Query: 602 AWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLT 661
           AWLSYRLLKASEPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLT
Sbjct: 603 AWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLT 662

Query: 662 VAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWHK 721
           VAVADSIPEVL +LGSL+   +   S L+LYLVVAVAA+SC+FL FV VLL LRL RWHK
Sbjct: 663 VAVADSIPEVLADLGSLESLANSETSDLSLYLVVAVAAVSCIFLVFVIVLLALRLWRWHK 722

Query: 722 SRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLIS 781
           SRLLQ S G L G+P SHFVGV+ VQAFLQTYS EVSL ADS+KSHLIFPQPNY D LIS
Sbjct: 723 SRLLQASEGGLAGMPTSHFVGVDGVQAFLQTYSHEVSLIADSQKSHLIFPQPNYGDTLIS 782

Query: 782 QEGCEKNDSLLTSVD 796
           QE CEK++ LL + D
Sbjct: 783 QESCEKSEPLLIAED 797


>gi|11128039 protocadherin gamma subfamily A, 11 isoform 1 precursor
           [Homo sapiens]
          Length = 935

 Score = 1103 bits (2853), Expect = 0.0
 Identities = 564/795 (70%), Positives = 654/795 (82%), Gaps = 4/795 (0%)

Query: 6   SRPRRGE----LILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLAK 61
           +R +RG+    L+LLC  LGTL      QIRYSVPEET+KGSFVGNISKDLGL+PR+LAK
Sbjct: 3   NRLQRGDRSRLLLLLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPRELAK 62

Query: 62  HGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVEI 121
            GVRIVSRG+TQLFA+NPRSGSLITAGRIDREELC     C +N+  LVED  K++GVE+
Sbjct: 63  RGVRIVSRGKTQLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGVEV 122

Query: 122 EIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSLD 181
           EIIDINDN P FQ +++E+K++E A+PGAR+ LP A DPDVGVNSLQSYQLSPN++FSL 
Sbjct: 123 EIIDINDNAPSFQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFSLQ 182

Query: 182 VQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAPV 241
           ++   +GA NPELVLE +LDRE+EAAH L+LTA DGG P R   V I V VLD ND+ P+
Sbjct: 183 LRGRTDGAKNPELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHIPM 242

Query: 242 FPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGEI 301
           F   +YRV V EN+  GTR+L V A+DPDEGING+V Y FR +  K + +FQL+  TGE+
Sbjct: 243 FTQSVYRVSVPENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTGEV 302

Query: 302 SIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENSL 361
            +  SLD+E+  FYEMEIQ +D G L   T +LI+V DVNDN PE+ ITS  + +LENS 
Sbjct: 303 QVRGSLDFEKYRFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILENSP 362

Query: 362 PGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNIT 421
           PGTVIA L+V DQDSG+NGQV C+  ++LPFKLEK+ GNYY+L+T + LDRE V  YNIT
Sbjct: 363 PGTVIALLNVQDQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYNIT 422

Query: 422 VMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPDS 481
           + A+D G+PPLS ET + L+VAD NDNPP FPH+SYSAYI ENN RGASIFS+TA DPDS
Sbjct: 423 LTATDQGSPPLSAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDPDS 482

Query: 482 QENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDPP 541
           ++NA VTYS+T+DT+QG PLSSY+SINS+TGVLYALQSFDYEQ RDL+L V A DSGDPP
Sbjct: 483 KQNALVTYSLTDDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGDPP 542

Query: 542 LSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQN 601
           LSSN+SLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAE GYLVTKVVAVD+DSGQN
Sbjct: 543 LSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQN 602

Query: 602 AWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLT 661
           AWLSYRLLKASEPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLT
Sbjct: 603 AWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLT 662

Query: 662 VAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWHK 721
           VAVADSIPEVL +LGSL+   +   S L+LYLVVAVAA+SC+FL FV VLL LRL RWHK
Sbjct: 663 VAVADSIPEVLADLGSLESLANSETSDLSLYLVVAVAAVSCIFLVFVIVLLALRLWRWHK 722

Query: 722 SRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLIS 781
           SRLLQ S G L G+P SHFVGV+ VQAFLQTYS EVSL ADS+KSHLIFPQPNY D LIS
Sbjct: 723 SRLLQASEGGLAGMPTSHFVGVDGVQAFLQTYSHEVSLIADSQKSHLIFPQPNYGDTLIS 782

Query: 782 QEGCEKNDSLLTSVD 796
           QE CEK++ LL + D
Sbjct: 783 QESCEKSEPLLIAED 797


>gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precursor
           [Homo sapiens]
          Length = 931

 Score = 1094 bits (2830), Expect = 0.0
 Identities = 565/791 (71%), Positives = 633/791 (80%)

Query: 13  LILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLAKHGVRIVSRGRT 72
           L+LLC  L  L E G G I YSVPEETDKGSFVGNI+KDLGL P++LA  GVRIVSRGR 
Sbjct: 13  LMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRGRM 72

Query: 73  QLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVEIEIIDINDNNPK 132
            LFALNPRSGSLITA RIDREELCAQS  CL++ N LVEDK KLF VE+EIIDINDN P+
Sbjct: 73  PLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNTPQ 132

Query: 133 FQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSLDVQTGDNGAINP 192
           FQ+E+LE K+NEI  PG R  LP   D DVG+NSLQSYQLS N HFSLDVQ G +G  +P
Sbjct: 133 FQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQHP 192

Query: 193 ELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAPVFPHPIYRVKVL 252
           E+VL+  LDREEEA HHL+LTASDGG+P RS T+RI++ V+D NDN P F    Y + V 
Sbjct: 193 EMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINVP 252

Query: 253 ENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGEISIAKSLDYEEC 312
           EN+P GT+LL V A+DPDEG NG+V Y F  ++ +   +F+L+  TGEIS  + LD+EE 
Sbjct: 253 ENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFEEY 312

Query: 313 SFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENSLPGTVIAFLSVH 372
             Y ME+QA+D   L+ + K+LI V DVNDN PEV ITS+ + V EN  PGT+IA +SVH
Sbjct: 313 KMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALISVH 372

Query: 373 DQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNITVMASDLGTPPL 432
           DQDSG NG   C+   NLPFKLEK + NYYRLVT + LDRE +S YNIT+ A D GTP L
Sbjct: 373 DQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTPAL 432

Query: 433 STETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPDSQENAQVTYSVT 492
           STET I+L V DINDN P F   SYSAYI ENN RGASIFS+ AHD DS ENAQ+TYS+ 
Sbjct: 433 STETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYSLI 492

Query: 493 EDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDPPLSSNMSLSLFV 552
           EDT+QGAPLS+Y+SINSDTGVLYAL+SFDYEQ RD+QL V A DSGDPPLSSN+SLSLF+
Sbjct: 493 EDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSLFL 552

Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
           LDQNDNAPEILYPALPTDGSTGVELAP SAE GYLVTKVVAVDRDSGQNAWLSYRLLKAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612

Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVL 672
           EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD I ++L
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISDIL 672

Query: 673 TELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWHKSRLLQDSGGRL 732
            +LGSL+PS  PNDS LTLYLVVA AA+SCVFLAFV VLL  RLRRWHKSRLLQ SGG L
Sbjct: 673 ADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGL 732

Query: 733 VGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLISQEGCEKNDSLL 792
             +P SHFVGV+ V+AFLQTYS EVSLTADSRKSHLIFPQPNYAD LISQE CEK   L 
Sbjct: 733 ASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKGFLS 792

Query: 793 TSVDFHEYKNE 803
                 E K E
Sbjct: 793 APQSLLEDKKE 803


>gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precursor
           [Homo sapiens]
          Length = 823

 Score = 1094 bits (2830), Expect = 0.0
 Identities = 565/791 (71%), Positives = 633/791 (80%)

Query: 13  LILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLAKHGVRIVSRGRT 72
           L+LLC  L  L E G G I YSVPEETDKGSFVGNI+KDLGL P++LA  GVRIVSRGR 
Sbjct: 13  LMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRGRM 72

Query: 73  QLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVEIEIIDINDNNPK 132
            LFALNPRSGSLITA RIDREELCAQS  CL++ N LVEDK KLF VE+EIIDINDN P+
Sbjct: 73  PLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNTPQ 132

Query: 133 FQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSLDVQTGDNGAINP 192
           FQ+E+LE K+NEI  PG R  LP   D DVG+NSLQSYQLS N HFSLDVQ G +G  +P
Sbjct: 133 FQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQHP 192

Query: 193 ELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAPVFPHPIYRVKVL 252
           E+VL+  LDREEEA HHL+LTASDGG+P RS T+RI++ V+D NDN P F    Y + V 
Sbjct: 193 EMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINVP 252

Query: 253 ENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGEISIAKSLDYEEC 312
           EN+P GT+LL V A+DPDEG NG+V Y F  ++ +   +F+L+  TGEIS  + LD+EE 
Sbjct: 253 ENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFEEY 312

Query: 313 SFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENSLPGTVIAFLSVH 372
             Y ME+QA+D   L+ + K+LI V DVNDN PEV ITS+ + V EN  PGT+IA +SVH
Sbjct: 313 KMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALISVH 372

Query: 373 DQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNITVMASDLGTPPL 432
           DQDSG NG   C+   NLPFKLEK + NYYRLVT + LDRE +S YNIT+ A D GTP L
Sbjct: 373 DQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTPAL 432

Query: 433 STETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPDSQENAQVTYSVT 492
           STET I+L V DINDN P F   SYSAYI ENN RGASIFS+ AHD DS ENAQ+TYS+ 
Sbjct: 433 STETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYSLI 492

Query: 493 EDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDPPLSSNMSLSLFV 552
           EDT+QGAPLS+Y+SINSDTGVLYAL+SFDYEQ RD+QL V A DSGDPPLSSN+SLSLF+
Sbjct: 493 EDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSLFL 552

Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
           LDQNDNAPEILYPALPTDGSTGVELAP SAE GYLVTKVVAVDRDSGQNAWLSYRLLKAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612

Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVL 672
           EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD I ++L
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISDIL 672

Query: 673 TELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWHKSRLLQDSGGRL 732
            +LGSL+PS  PNDS LTLYLVVA AA+SCVFLAFV VLL  RLRRWHKSRLLQ SGG L
Sbjct: 673 ADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGL 732

Query: 733 VGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLISQEGCEKNDSLL 792
             +P SHFVGV+ V+AFLQTYS EVSLTADSRKSHLIFPQPNYAD LISQE CEK   L 
Sbjct: 733 ASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKGFLS 792

Query: 793 TSVDFHEYKNE 803
                 E K E
Sbjct: 793 APQSLLEDKKE 803


>gi|14196462 protocadherin gamma subfamily A, 2 isoform 2 precursor
           [Homo sapiens]
          Length = 823

 Score = 1091 bits (2821), Expect = 0.0
 Identities = 563/809 (69%), Positives = 640/809 (79%)

Query: 1   MAAPQSRPRRGELILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLA 60
           MAA Q  P   +L+LLC LL TLWE   GQIRYSV EE D+GSFVGNI+KDLGL+P  LA
Sbjct: 1   MAALQKLPHCRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALA 60

Query: 61  KHGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVE 120
           + GVRIVSRGR+QLFALNPRSGSL+TA RIDREELCAQS  CL+N N L+EDK  ++ VE
Sbjct: 61  EQGVRIVSRGRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVE 120

Query: 121 IEIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSL 180
           +EI DINDN P+F VE+LE+KI+E   PG R PL  A D DVG N+LQ Y L+PN HFSL
Sbjct: 121 VEITDINDNAPRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSL 180

Query: 181 DVQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAP 240
           DV+ G +G   PELVLER+LDREEEA HHLVL ASDGG P  S T RI V VLD NDNAP
Sbjct: 181 DVRRGADGNKYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAP 240

Query: 241 VFPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGE 300
           VF  P YR+ + EN   GTR+LTVTA+D DEG   +V Y   K   + + +F+L   +GE
Sbjct: 241 VFTQPEYRISIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGE 300

Query: 301 ISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENS 360
           ++I K LDYE+ +F+E++I+A+D   LL R K++++V DVNDN PE  +TS  S V E+S
Sbjct: 301 LTIIKDLDYEDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDS 360

Query: 361 LPGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNI 420
           LPGT+I   +VHD+DSG+N    C   ++LPFKLEKS+ NYYRLVT + LDRE  S YNI
Sbjct: 361 LPGTIIGLFNVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNI 420

Query: 421 TVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPD 480
           T+ A D G P LST+  I L VADINDN P F   SYS YI ENN RGAS+FS+TAHDPD
Sbjct: 421 TLTAKDGGNPSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPD 480

Query: 481 SQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDP 540
           S +NA VTYS  EDT+QGAPLSSYISINSDTGVLYAL+SFDYEQ+RDLQ+ V A DSG+P
Sbjct: 481 SNDNAHVTYSFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNP 540

Query: 541 PLSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQ 600
           PLSSN+SLSLFVLDQNDNAPEILYPA PTDGSTGVELAPRSAE GYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
           NAWLSY LLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVA+QDHGQPPLSATVTL
Sbjct: 601 NAWLSYHLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTL 660

Query: 661 TVAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWH 720
           TVAVAD IP++L +LGSL+PS  PNDS LTLYLVVAVAA+SCVFLAFV VLL  RLRRWH
Sbjct: 661 TVAVADRIPDILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWH 720

Query: 721 KSRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLI 780
           KSRLLQ SGG L G+ +SHFVGV+ V+AFLQTYS EVSLTADSRKSHLIFPQPNYAD LI
Sbjct: 721 KSRLLQASGGSLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780

Query: 781 SQEGCEKNDSLLTSVDFHEYKNEADHGQV 809
           SQE CEK D L       E + E    QV
Sbjct: 781 SQESCEKKDFLSAPQSLLEEEREETFSQV 809


>gi|11056030 protocadherin gamma subfamily A, 2 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 1089 bits (2817), Expect = 0.0
 Identities = 562/808 (69%), Positives = 639/808 (79%)

Query: 1   MAAPQSRPRRGELILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLA 60
           MAA Q  P   +L+LLC LL TLWE   GQIRYSV EE D+GSFVGNI+KDLGL+P  LA
Sbjct: 1   MAALQKLPHCRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALA 60

Query: 61  KHGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVE 120
           + GVRIVSRGR+QLFALNPRSGSL+TA RIDREELCAQS  CL+N N L+EDK  ++ VE
Sbjct: 61  EQGVRIVSRGRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVE 120

Query: 121 IEIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSL 180
           +EI DINDN P+F VE+LE+KI+E   PG R PL  A D DVG N+LQ Y L+PN HFSL
Sbjct: 121 VEITDINDNAPRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSL 180

Query: 181 DVQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAP 240
           DV+ G +G   PELVLER+LDREEEA HHLVL ASDGG P  S T RI V VLD NDNAP
Sbjct: 181 DVRRGADGNKYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAP 240

Query: 241 VFPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGE 300
           VF  P YR+ + EN   GTR+LTVTA+D DEG   +V Y   K   + + +F+L   +GE
Sbjct: 241 VFTQPEYRISIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGE 300

Query: 301 ISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENS 360
           ++I K LDYE+ +F+E++I+A+D   LL R K++++V DVNDN PE  +TS  S V E+S
Sbjct: 301 LTIIKDLDYEDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDS 360

Query: 361 LPGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNI 420
           LPGT+I   +VHD+DSG+N    C   ++LPFKLEKS+ NYYRLVT + LDRE  S YNI
Sbjct: 361 LPGTIIGLFNVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNI 420

Query: 421 TVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPD 480
           T+ A D G P LST+  I L VADINDN P F   SYS YI ENN RGAS+FS+TAHDPD
Sbjct: 421 TLTAKDGGNPSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPD 480

Query: 481 SQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDP 540
           S +NA VTYS  EDT+QGAPLSSYISINSDTGVLYAL+SFDYEQ+RDLQ+ V A DSG+P
Sbjct: 481 SNDNAHVTYSFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNP 540

Query: 541 PLSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQ 600
           PLSSN+SLSLFVLDQNDNAPEILYPA PTDGSTGVELAPRSAE GYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
           NAWLSY LLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVA+QDHGQPPLSATVTL
Sbjct: 601 NAWLSYHLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTL 660

Query: 661 TVAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWH 720
           TVAVAD IP++L +LGSL+PS  PNDS LTLYLVVAVAA+SCVFLAFV VLL  RLRRWH
Sbjct: 661 TVAVADRIPDILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWH 720

Query: 721 KSRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLI 780
           KSRLLQ SGG L G+ +SHFVGV+ V+AFLQTYS EVSLTADSRKSHLIFPQPNYAD LI
Sbjct: 721 KSRLLQASGGSLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780

Query: 781 SQEGCEKNDSLLTSVDFHEYKNEADHGQ 808
           SQE CEK D L       E + E    Q
Sbjct: 781 SQESCEKKDFLSAPQSLLEEEREETFSQ 808


>gi|14196455 protocadherin gamma subfamily A, 11 isoform 3 precursor
           [Homo sapiens]
          Length = 750

 Score =  852 bits (2202), Expect = 0.0
 Identities = 431/624 (69%), Positives = 509/624 (81%), Gaps = 4/624 (0%)

Query: 6   SRPRRGE----LILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLAK 61
           +R +RG+    L+LLC  LGTL      QIRYSVPEET+KGSFVGNISKDLGL+PR+LAK
Sbjct: 3   NRLQRGDRSRLLLLLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPRELAK 62

Query: 62  HGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVEI 121
            GVRIVSRG+TQLFA+NPRSGSLITAGRIDREELC     C +N+  LVED  K++GVE+
Sbjct: 63  RGVRIVSRGKTQLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGVEV 122

Query: 122 EIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSLD 181
           EIIDINDN P FQ +++E+K++E A+PGAR+ LP A DPDVGVNSLQSYQLSPN++FSL 
Sbjct: 123 EIIDINDNAPSFQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFSLQ 182

Query: 182 VQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAPV 241
           ++   +GA NPELVLE +LDRE+EAAH L+LTA DGG P R   V I V VLD ND+ P+
Sbjct: 183 LRGRTDGAKNPELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHIPM 242

Query: 242 FPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGEI 301
           F   +YRV V EN+  GTR+L V A+DPDEGING+V Y FR +  K + +FQL+  TGE+
Sbjct: 243 FTQSVYRVSVPENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTGEV 302

Query: 302 SIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENSL 361
            +  SLD+E+  FYEMEIQ +D G L   T +LI+V DVNDN PE+ ITS  + +LENS 
Sbjct: 303 QVRGSLDFEKYRFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILENSP 362

Query: 362 PGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNIT 421
           PGTVIA L+V DQDSG+NGQV C+  ++LPFKLEK+ GNYY+L+T + LDRE V  YNIT
Sbjct: 363 PGTVIALLNVQDQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYNIT 422

Query: 422 VMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPDS 481
           + A+D G+PPLS ET + L+VAD NDNPP FPH+SYSAYI ENN RGASIFS+TA DPDS
Sbjct: 423 LTATDQGSPPLSAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDPDS 482

Query: 482 QENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDPP 541
           ++NA VTYS+T+DT+QG PLSSY+SINS+TGVLYALQSFDYEQ RDL+L V A DSGDPP
Sbjct: 483 KQNALVTYSLTDDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGDPP 542

Query: 542 LSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQN 601
           LSSN+SLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAE GYLVTKVVAVD+DSGQN
Sbjct: 543 LSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQN 602

Query: 602 AWLSYRLLKASEPGLFSVGLHTGE 625
           AWLSYRLLKASEPGLF+VG HTGE
Sbjct: 603 AWLSYRLLKASEPGLFAVGEHTGE 626



 Score =  162 bits (411), Expect = 9e-40
 Identities = 176/621 (28%), Positives = 262/621 (42%), Gaps = 69/621 (11%)

Query: 151 RYPLPEAVDPDVGVNSL-QSYQLSPNHHFSLDVQTGDNG-----AINPE---LVLERALD 201
           RY +PE  +    V ++ +   L P       V+    G     A+NP    L+    +D
Sbjct: 33  RYSVPEETEKGSFVGNISKDLGLEPRELAKRGVRIVSRGKTQLFAVNPRSGSLITAGRID 92

Query: 202 REE------EAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAPVFPHPIYRVKVLENM 255
           REE          ++ L   D  K        + V ++D NDNAP F      +KV E+ 
Sbjct: 93  REELCETVSSCFLNMELLVEDTLK-----IYGVEVEIIDINDNAPSFQEDEVEIKVSEHA 147

Query: 256 PPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTG--EISIAKSLDYEECS 313
            PG R     A DPD G+N   +Y+    N     L    +     E+ +  SLD E+ +
Sbjct: 148 IPGARFALPNARDPDVGVNSLQSYQLSPNNYFSLQLRGRTDGAKNPELVLEGSLDREKEA 207

Query: 314 FYEMEIQAEDVGALL--GRTKLLISVEDVNDNRPEVIITSLFSPVLENSLPGTVIAFLSV 371
            + + + A D G  +  G   + + V DVND+ P    +     V EN   GT +  ++ 
Sbjct: 208 AHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHIPMFTQSVYRVSVPENISSGTRVLMVNA 267

Query: 372 HDQDSGKNGQVVCYTRDNLP------FKLEKSIGNYYRLVTRKYLDRENVSIYNITVMAS 425
            D D G NG+V+ Y+  N+       F+L+   G    +  R  LD E    Y + +   
Sbjct: 268 TDPDEGINGEVM-YSFRNMESKASEIFQLDSQTGE---VQVRGSLDFEKYRFYEMEIQGQ 323

Query: 426 DLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPDSQENA 485
           D G   L T T + + V D+NDN P     S    ILEN+  G  I  L   D DS EN 
Sbjct: 324 DGGG--LFTTTTMLITVVDVNDNAPEITITSSINSILENSPPGTVIALLNVQDQDSGENG 381

Query: 486 QVTYSVTEDTLQGAPLSSYISINSDTGVLYAL---QSFDYEQIRDLQLLVTASDSGDPPL 542
           QV+  +        P      +    G  Y L   +  D E ++   + +TA+D G PPL
Sbjct: 382 QVSCFI--------PNHLPFKLEKTYGNYYKLITSRVLDRELVQSYNITLTATDQGSPPL 433

Query: 543 SSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQNA 602
           S+   + L V D NDN P  ++P      S+     P +  RG  +  V A+D DS QNA
Sbjct: 434 SAETHVWLNVADDNDNPP--VFPH-----SSYSAYIPENNPRGASIFSVTALDPDSKQNA 486

Query: 603 WLSYRLLKASEPGL-----FSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSAT 657
            ++Y L   +  G+      S+  +TG +   ++          L V  +D G PPLS+ 
Sbjct: 487 LVTYSLTDDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGDPPLSSN 546

Query: 658 VTLTVAVA---DSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGL 714
           V+L++ V    D+ PE+      L P++ P D S  + L    A    +    VAV    
Sbjct: 547 VSLSLFVLDQNDNAPEI------LYPAL-PTDGSTGVELAPRSAEPGYLVTKVVAVDKDS 599

Query: 715 RLRRWHKSRLLQDSGGRLVGV 735
               W   RLL+ S   L  V
Sbjct: 600 GQNAWLSYRLLKASEPGLFAV 620


>gi|11128035 protocadherin gamma subfamily B, 2 isoform 1 precursor
           [Homo sapiens]
          Length = 931

 Score =  659 bits (1700), Expect = 0.0
 Identities = 337/688 (48%), Positives = 459/688 (66%), Gaps = 3/688 (0%)

Query: 30  QIRYSVPEETDKGSFVGNISKDLGLDPRKLAKHGVRIVSRGRTQLFALNPRSGSLITAGR 89
           QIRYS+PEE  K S VGN++KDLGL  R L    +R+ +    + F +NP SG L+ + R
Sbjct: 32  QIRYSIPEELAKNSVVGNLAKDLGLSVRDLPARKLRVSAE--KEYFTVNPESGDLLVSDR 89

Query: 90  IDREELCAQSPRCLININTLVEDKGKLFGVEIEIIDINDNNPKFQVEDLEVKINEIAVPG 149
           IDRE++C + P C+++ +T+ E+   +F + + + DINDN P F+   + +KI E   PG
Sbjct: 90  IDREQICGKQPLCVLDFDTVAENPLNIFYIAVIVQDINDNTPLFKQTKINLKIGESTKPG 149

Query: 150 ARYPLPEAVDPDVGVNSLQSYQLSPNHHFSLDVQTGDNGAINPELVLERALDREEEAAHH 209
             +PL  A+D DVG NSLQ Y L+ N +F L  +   +G   PEL+L+ +LDREE + H 
Sbjct: 150 TTFPLDPALDSDVGPNSLQRYHLNDNEYFDLAEKQTPDGRKYPELILKHSLDREEHSLHQ 209

Query: 210 LVLTASDGGKPPRSSTVRIHVTVLDTNDNAPVFPHPIYRVKVLENMPPGTRLLTVTASDP 269
           LVLTA DGG PP+S T +I + V D NDN PVF   +YRV + E++PPG  +L VTA+D 
Sbjct: 210 LVLTAVDGGDPPQSGTTQIRIKVTDANDNPPVFSQDVYRVTLREDVPPGFFVLQVTATDR 269

Query: 270 DEGINGKVAYKFRKINEKQTPLFQLNENTGEISIAKSLDYEECSFYEMEIQAEDVGALLG 329
           DEGIN ++ Y F  ++E+    F LNE TGEI+    LD+E  S Y + I+A+D G L  
Sbjct: 270 DEGINAEITYSFHNVDEQVKHFFNLNEKTGEITTKDDLDFEIASSYTLSIEAKDPGDLAA 329

Query: 330 RTKLLISVEDVNDNRPEVIITSLFSPVLENSLPGTVIAFLSVHDQDSGKNGQVVCYTRDN 389
              + + + D ND  PEVI+TS+ +P+ E+S PGTVIA +   D+DSG+NG+V C    N
Sbjct: 330 HCSIQVEILDDNDCAPEVIVTSVSTPLPEDSPPGTVIALIKTRDRDSGENGEVYCQVLGN 389

Query: 390 LPFKLEKSIGNYYRLVTRKYLDRENVSIYNITVMASDLGTPPLSTETQIALHVADINDNP 449
             F L+ S  NYY+LVT   LDRE +  YN+T+ A+D G PPLS+   + LH++D+NDN 
Sbjct: 390 AKFILKSSSKNYYKLVTDGALDREEIPEYNLTITATDGGKPPLSSSIIVTLHISDVNDNA 449

Query: 450 PTFPHASYSAYILENNLRGASIFSLTAHDPDSQENAQVTYSVTEDTLQGAPLSSYISINS 509
           P F   SY  ++ ENN  GASI  ++A DPD   + QV+YS+    L+   + SY+S+++
Sbjct: 450 PVFQQTSYMVHVAENNPPGASIAQISASDPDLGPSGQVSYSIVASDLKPREILSYVSVSA 509

Query: 510 DTGVLYALQSFDYEQIRDLQLLVTASDSGDPPLSSNMSLSLFVLDQNDNAPEILYPALPT 569
            +GV++A ++FD+EQ+R  +L + A D G P LS+N+SL + V D NDNAP +LYPAL  
Sbjct: 510 QSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVGDLNDNAPRVLYPALGP 569

Query: 570 DGSTGVELAPRSAERGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFSVGLHTGEVRTA 629
           DGS   ++ PR+AE GYLVTKVVAVD DSG NAWLSY +L+ASEPGLFS+GL TGEVRTA
Sbjct: 570 DGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEPGLFSLGLRTGEVRTA 629

Query: 630 RALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVLTELGSLKPSVDPNDSSL 689
           RAL DRDA +Q L+VAV+D GQPPLSAT TL +  ADS+ EVL +L   +   DP  + L
Sbjct: 630 RALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVLPDLSDRREPSDP-QAKL 688

Query: 690 TLYLVVAVAAISCVFLAFVAVLLGLRLR 717
             YLVVA+A IS +F   V + + LRLR
Sbjct: 689 QFYLVVALALISVLFFLAVILAISLRLR 716


>gi|14270493 protocadherin gamma subfamily B, 2 isoform 2 precursor
           [Homo sapiens]
          Length = 811

 Score =  659 bits (1700), Expect = 0.0
 Identities = 337/688 (48%), Positives = 459/688 (66%), Gaps = 3/688 (0%)

Query: 30  QIRYSVPEETDKGSFVGNISKDLGLDPRKLAKHGVRIVSRGRTQLFALNPRSGSLITAGR 89
           QIRYS+PEE  K S VGN++KDLGL  R L    +R+ +    + F +NP SG L+ + R
Sbjct: 32  QIRYSIPEELAKNSVVGNLAKDLGLSVRDLPARKLRVSAE--KEYFTVNPESGDLLVSDR 89

Query: 90  IDREELCAQSPRCLININTLVEDKGKLFGVEIEIIDINDNNPKFQVEDLEVKINEIAVPG 149
           IDRE++C + P C+++ +T+ E+   +F + + + DINDN P F+   + +KI E   PG
Sbjct: 90  IDREQICGKQPLCVLDFDTVAENPLNIFYIAVIVQDINDNTPLFKQTKINLKIGESTKPG 149

Query: 150 ARYPLPEAVDPDVGVNSLQSYQLSPNHHFSLDVQTGDNGAINPELVLERALDREEEAAHH 209
             +PL  A+D DVG NSLQ Y L+ N +F L  +   +G   PEL+L+ +LDREE + H 
Sbjct: 150 TTFPLDPALDSDVGPNSLQRYHLNDNEYFDLAEKQTPDGRKYPELILKHSLDREEHSLHQ 209

Query: 210 LVLTASDGGKPPRSSTVRIHVTVLDTNDNAPVFPHPIYRVKVLENMPPGTRLLTVTASDP 269
           LVLTA DGG PP+S T +I + V D NDN PVF   +YRV + E++PPG  +L VTA+D 
Sbjct: 210 LVLTAVDGGDPPQSGTTQIRIKVTDANDNPPVFSQDVYRVTLREDVPPGFFVLQVTATDR 269

Query: 270 DEGINGKVAYKFRKINEKQTPLFQLNENTGEISIAKSLDYEECSFYEMEIQAEDVGALLG 329
           DEGIN ++ Y F  ++E+    F LNE TGEI+    LD+E  S Y + I+A+D G L  
Sbjct: 270 DEGINAEITYSFHNVDEQVKHFFNLNEKTGEITTKDDLDFEIASSYTLSIEAKDPGDLAA 329

Query: 330 RTKLLISVEDVNDNRPEVIITSLFSPVLENSLPGTVIAFLSVHDQDSGKNGQVVCYTRDN 389
              + + + D ND  PEVI+TS+ +P+ E+S PGTVIA +   D+DSG+NG+V C    N
Sbjct: 330 HCSIQVEILDDNDCAPEVIVTSVSTPLPEDSPPGTVIALIKTRDRDSGENGEVYCQVLGN 389

Query: 390 LPFKLEKSIGNYYRLVTRKYLDRENVSIYNITVMASDLGTPPLSTETQIALHVADINDNP 449
             F L+ S  NYY+LVT   LDRE +  YN+T+ A+D G PPLS+   + LH++D+NDN 
Sbjct: 390 AKFILKSSSKNYYKLVTDGALDREEIPEYNLTITATDGGKPPLSSSIIVTLHISDVNDNA 449

Query: 450 PTFPHASYSAYILENNLRGASIFSLTAHDPDSQENAQVTYSVTEDTLQGAPLSSYISINS 509
           P F   SY  ++ ENN  GASI  ++A DPD   + QV+YS+    L+   + SY+S+++
Sbjct: 450 PVFQQTSYMVHVAENNPPGASIAQISASDPDLGPSGQVSYSIVASDLKPREILSYVSVSA 509

Query: 510 DTGVLYALQSFDYEQIRDLQLLVTASDSGDPPLSSNMSLSLFVLDQNDNAPEILYPALPT 569
            +GV++A ++FD+EQ+R  +L + A D G P LS+N+SL + V D NDNAP +LYPAL  
Sbjct: 510 QSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVGDLNDNAPRVLYPALGP 569

Query: 570 DGSTGVELAPRSAERGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFSVGLHTGEVRTA 629
           DGS   ++ PR+AE GYLVTKVVAVD DSG NAWLSY +L+ASEPGLFS+GL TGEVRTA
Sbjct: 570 DGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEPGLFSLGLRTGEVRTA 629

Query: 630 RALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVLTELGSLKPSVDPNDSSL 689
           RAL DRDA +Q L+VAV+D GQPPLSAT TL +  ADS+ EVL +L   +   DP  + L
Sbjct: 630 RALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVLPDLSDRREPSDP-QAKL 688

Query: 690 TLYLVVAVAAISCVFLAFVAVLLGLRLR 717
             YLVVA+A IS +F   V + + LRLR
Sbjct: 689 QFYLVVALALISVLFFLAVILAISLRLR 716


>gi|14270505 protocadherin gamma subfamily B, 5 isoform 2 precursor
           [Homo sapiens]
          Length = 818

 Score =  655 bits (1691), Expect = 0.0
 Identities = 338/689 (49%), Positives = 457/689 (66%), Gaps = 7/689 (1%)

Query: 30  QIRYSVPEETDKGSFVGNISKDLGLDPRKLAKHGVRIVSRGRTQLFALNPRSGSLITAGR 89
           QIRY +PEE  KGS VGN++ DLG   ++L    +R+ S      F ++  SG L+ + R
Sbjct: 32  QIRYRIPEEMPKGSVVGNLATDLGFSVQELPTRKLRVSSE--KPYFTVSAESGELLVSSR 89

Query: 90  IDREELCAQSPRCLININTLVEDKGKLFGVEIEIIDINDNNPKFQVEDLEVKINEIAVPG 149
           +DREE+C + P C +    + E+    + V +EI DIND+ PKF     E++I+E A PG
Sbjct: 90  LDREEICGKKPACALEFEAVAENPLNFYHVNVEIEDINDHTPKFTQNSFELQISESAQPG 149

Query: 150 ARYPLPEAVDPDVGVNSLQSYQLSPNHHFSLDVQTGDNGAINPELVLERALDREEEAAHH 209
            R+ L  A D D+G+NSLQ Y+LS N  FSL ++   +G+  PEL LE+ LDRE+++ H 
Sbjct: 150 TRFILEVAEDADIGLNSLQKYKLSLNPSFSLIIKEKQDGSKYPELALEKTLDREQQSYHR 209

Query: 210 LVLTASDGGKPPRSSTVRIHVTVLDTNDNAPVFPHPIYRVKVLENMPPGTRLLTVTASDP 269
           LVLTA DGG PP S T  + + V D NDN PVF   +YRV + EN+PPGT +L V+A+D 
Sbjct: 210 LVLTALDGGHPPLSGTTELRIQVTDANDNPPVFNRDVYRVSLRENVPPGTTVLQVSATDQ 269

Query: 270 DEGINGKVAYKFRKINEKQTPLFQLNENTGEISIAKSLDYEECSFYEMEIQAEDVGALLG 329
           DEGIN ++ Y F +  +    +F LN  +GEI+  K LD+EE   Y M ++  D G L+ 
Sbjct: 270 DEGINSEITYSFYRTGQ----IFSLNSKSGEITTQKKLDFEETKEYSMVVEGRDGGGLVA 325

Query: 330 RTKLLISVEDVNDNRPEVIITSLFSPVLENSLPGTVIAFLSVHDQDSGKNGQVVCYTRDN 389
           +  + I+++D NDN PEV   SL   +LEN++PGT+IA + +HDQDSG+NG+V C  +  
Sbjct: 326 QCTVEINIQDENDNSPEVTFHSLLEMILENAVPGTLIALIKIHDQDSGENGEVNCQLQGE 385

Query: 390 LPFKLEKSIGNYYRLVTRKYLDRENVSIYNITVMASDLGTPPLSTETQIALHVADINDNP 449
           +PFK+  S  N Y+LVT   LDRE    YN+T+ A+D G PPLS+   + LH+ D+NDN 
Sbjct: 386 VPFKIISSSKNSYKLVTDGTLDREQTPEYNVTITATDRGKPPLSSSISVILHIRDVNDNA 445

Query: 450 PTFPHASYSAYILENNLRGASIFSLTAHDPDSQENAQVTYSVTEDTLQGAPLSSYISINS 509
           P F  ASY   + ENN  GASI  + A D D   N QV+YS+    L+   L+SY+S+++
Sbjct: 446 PVFHQASYLVSVPENNPPGASIAQVCASDLDLGLNGQVSYSIMASDLEPLALASYVSMSA 505

Query: 510 DTGVLYALQSFDYEQIRDLQLLVTASDSGDPPLSSNMSLSLFVLDQNDNAPEILYPALPT 569
            +GV++A ++FDYEQ+R  +L + A D G P LS+N+SL + V D+NDNAP +LYPAL  
Sbjct: 506 QSGVVFAQRAFDYEQLRTFELTLQARDQGSPALSANVSLRVLVGDRNDNAPRVLYPALGP 565

Query: 570 DGSTGVELAPRSAERGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFSVGLHTGEVRTA 629
           DGS   ++ PR+AE GYLVTKVVAVD DSG NAWLSY +L+ASEPGLFS+GL TGEVRTA
Sbjct: 566 DGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEPGLFSLGLRTGEVRTA 625

Query: 630 RALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVLTELGSLKPSVDPNDSSL 689
           RAL DRDA +Q L+VAV+D GQPPLSAT TL +  ADS+ EVL ++       DP  + L
Sbjct: 626 RALGDRDAARQRLLVAVRDGGQPPLSATATLHLVFADSLQEVLPDITDRPVPSDP-QAEL 684

Query: 690 TLYLVVAVAAISCVFLAFVAVLLGLRLRR 718
             YLVVA+A IS +FL  V + + LRLRR
Sbjct: 685 QFYLVVALALISVLFLLAVILAVALRLRR 713


>gi|11128031 protocadherin gamma subfamily B, 5 isoform 1 precursor
           [Homo sapiens]
          Length = 923

 Score =  655 bits (1691), Expect = 0.0
 Identities = 338/689 (49%), Positives = 457/689 (66%), Gaps = 7/689 (1%)

Query: 30  QIRYSVPEETDKGSFVGNISKDLGLDPRKLAKHGVRIVSRGRTQLFALNPRSGSLITAGR 89
           QIRY +PEE  KGS VGN++ DLG   ++L    +R+ S      F ++  SG L+ + R
Sbjct: 32  QIRYRIPEEMPKGSVVGNLATDLGFSVQELPTRKLRVSSE--KPYFTVSAESGELLVSSR 89

Query: 90  IDREELCAQSPRCLININTLVEDKGKLFGVEIEIIDINDNNPKFQVEDLEVKINEIAVPG 149
           +DREE+C + P C +    + E+    + V +EI DIND+ PKF     E++I+E A PG
Sbjct: 90  LDREEICGKKPACALEFEAVAENPLNFYHVNVEIEDINDHTPKFTQNSFELQISESAQPG 149

Query: 150 ARYPLPEAVDPDVGVNSLQSYQLSPNHHFSLDVQTGDNGAINPELVLERALDREEEAAHH 209
            R+ L  A D D+G+NSLQ Y+LS N  FSL ++   +G+  PEL LE+ LDRE+++ H 
Sbjct: 150 TRFILEVAEDADIGLNSLQKYKLSLNPSFSLIIKEKQDGSKYPELALEKTLDREQQSYHR 209

Query: 210 LVLTASDGGKPPRSSTVRIHVTVLDTNDNAPVFPHPIYRVKVLENMPPGTRLLTVTASDP 269
           LVLTA DGG PP S T  + + V D NDN PVF   +YRV + EN+PPGT +L V+A+D 
Sbjct: 210 LVLTALDGGHPPLSGTTELRIQVTDANDNPPVFNRDVYRVSLRENVPPGTTVLQVSATDQ 269

Query: 270 DEGINGKVAYKFRKINEKQTPLFQLNENTGEISIAKSLDYEECSFYEMEIQAEDVGALLG 329
           DEGIN ++ Y F +  +    +F LN  +GEI+  K LD+EE   Y M ++  D G L+ 
Sbjct: 270 DEGINSEITYSFYRTGQ----IFSLNSKSGEITTQKKLDFEETKEYSMVVEGRDGGGLVA 325

Query: 330 RTKLLISVEDVNDNRPEVIITSLFSPVLENSLPGTVIAFLSVHDQDSGKNGQVVCYTRDN 389
           +  + I+++D NDN PEV   SL   +LEN++PGT+IA + +HDQDSG+NG+V C  +  
Sbjct: 326 QCTVEINIQDENDNSPEVTFHSLLEMILENAVPGTLIALIKIHDQDSGENGEVNCQLQGE 385

Query: 390 LPFKLEKSIGNYYRLVTRKYLDRENVSIYNITVMASDLGTPPLSTETQIALHVADINDNP 449
           +PFK+  S  N Y+LVT   LDRE    YN+T+ A+D G PPLS+   + LH+ D+NDN 
Sbjct: 386 VPFKIISSSKNSYKLVTDGTLDREQTPEYNVTITATDRGKPPLSSSISVILHIRDVNDNA 445

Query: 450 PTFPHASYSAYILENNLRGASIFSLTAHDPDSQENAQVTYSVTEDTLQGAPLSSYISINS 509
           P F  ASY   + ENN  GASI  + A D D   N QV+YS+    L+   L+SY+S+++
Sbjct: 446 PVFHQASYLVSVPENNPPGASIAQVCASDLDLGLNGQVSYSIMASDLEPLALASYVSMSA 505

Query: 510 DTGVLYALQSFDYEQIRDLQLLVTASDSGDPPLSSNMSLSLFVLDQNDNAPEILYPALPT 569
            +GV++A ++FDYEQ+R  +L + A D G P LS+N+SL + V D+NDNAP +LYPAL  
Sbjct: 506 QSGVVFAQRAFDYEQLRTFELTLQARDQGSPALSANVSLRVLVGDRNDNAPRVLYPALGP 565

Query: 570 DGSTGVELAPRSAERGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFSVGLHTGEVRTA 629
           DGS   ++ PR+AE GYLVTKVVAVD DSG NAWLSY +L+ASEPGLFS+GL TGEVRTA
Sbjct: 566 DGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEPGLFSLGLRTGEVRTA 625

Query: 630 RALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVLTELGSLKPSVDPNDSSL 689
           RAL DRDA +Q L+VAV+D GQPPLSAT TL +  ADS+ EVL ++       DP  + L
Sbjct: 626 RALGDRDAARQRLLVAVRDGGQPPLSATATLHLVFADSLQEVLPDITDRPVPSDP-QAEL 684

Query: 690 TLYLVVAVAAISCVFLAFVAVLLGLRLRR 718
             YLVVA+A IS +FL  V + + LRLRR
Sbjct: 685 QFYLVVALALISVLFLLAVILAVALRLRR 713


>gi|11128029 protocadherin gamma subfamily B, 6 isoform 1 precursor
           [Homo sapiens]
          Length = 930

 Score =  653 bits (1684), Expect = 0.0
 Identities = 335/688 (48%), Positives = 463/688 (67%), Gaps = 3/688 (0%)

Query: 31  IRYSVPEETDKGSFVGNISKDLGLDPRKLAKHGVRIVSRGRTQLFALNPRSGSLITAGRI 90
           IRYS+PEE  KGS VGN++KDLGL    ++   +R+ +      F+++  SG L+   RI
Sbjct: 33  IRYSIPEELAKGSVVGNLAKDLGLSVLDVSARKLRVSAEKLH--FSVDAESGDLLVKNRI 90

Query: 91  DREELCAQSPRCLININTLVEDKGKLFGVEIEIIDINDNNPKFQVEDLEVKINEIAVPGA 150
           DRE++C +  RC + +  +VE+   +F V + I D+ND+ P+F  +++ ++I E A  G 
Sbjct: 91  DREQICKERRRCELQLEAVVENPLNIFHVIVVIEDVNDHAPQFDKKEIHLEIFESASAGT 150

Query: 151 RYPLPEAVDPDVGVNSLQSYQLSPNHHFSLDVQTGDNGAINPELVLERALDREEEAAHHL 210
           R  L  A DPD+ +NS++ Y+++ N +FSL V+   +G   PEL LE+ LDREE+ +H L
Sbjct: 151 RLSLDPATDPDININSIKDYKINSNPYFSLMVRVNSDGGKYPELSLEKLLDREEQRSHSL 210

Query: 211 VLTASDGGKPPRSSTVRIHVTVLDTNDNAPVFPHPIYRVKVLENMPPGTRLLTVTASDPD 270
           +LTA DGG PPRS+T  I ++V DTNDN PVF    YR+ + EN+PPG+ +L VTA+D D
Sbjct: 211 ILTALDGGDPPRSATAHIEISVKDTNDNPPVFSRDEYRISLSENLPPGSPVLQVTATDQD 270

Query: 271 EGINGKVAYKFRKINEKQTPLFQLNENTGEISIAKSLDYEECSFYEMEIQAEDVGALLGR 330
           EG+N ++ Y FR   +    +F L+E TG I   +S D+E+   Y ME++A+D G L  +
Sbjct: 271 EGVNAEINYYFRSTAQSTKHMFSLDEKTGMIKNNQSFDFEDVERYTMEVEAKDGGGLSTQ 330

Query: 331 TKLLISVEDVNDNRPEVIITSLFSPVLENSLPGTVIAFLSVHDQDSGKNGQVVCYTRDNL 390
            K++I + D NDN PE+IITSL   +LENS PG V+A     D D G NG+V C    ++
Sbjct: 331 CKVIIEILDENDNSPEIIITSLSDQILENSPPGMVVALFKTRDLDFGGNGEVRCNIETDI 390

Query: 391 PFKLEKSIGNYYRLVTRKYLDRENVSIYNITVMASDLGTPPLSTETQIALHVADINDNPP 450
           PFK+  S  NYY+LVT   LDRE    YN+T++A+D G PPLS+   I L+VADINDN P
Sbjct: 391 PFKIYSSSNNYYKLVTDGALDREQTPEYNVTIVATDRGKPPLSSSRSITLYVADINDNAP 450

Query: 451 TFPHASYSAYILENNLRGASIFSLTAHDPDSQENAQVTYSVTEDTLQGAPLSSYISINSD 510
            F   SY  ++ ENN  GASI  ++A DPD   N  ++YS+    L+   +SSY+S+++ 
Sbjct: 451 VFDQTSYVVHVAENNPPGASIAQVSASDPDLGLNGHISYSIVASDLEPLAVSSYVSVSAQ 510

Query: 511 TGVLYALQSFDYEQIRDLQLLVTASDSGDPPLSSNMSLSLFVLDQNDNAPEILYPALPTD 570
           +GV++A ++FD+EQ+R   L + A D G P LS+N+SL + V D+NDNAP +LYPAL  D
Sbjct: 511 SGVVFAQRAFDHEQLRAFALTLQARDHGSPTLSANVSLRVLVGDRNDNAPRVLYPALGPD 570

Query: 571 GSTGVELAPRSAERGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFSVGLHTGEVRTAR 630
           GS   ++ PRSAE GYLVTKVVAVD DSG NAWLSY +L+ASEPGLFS+GL TGEVRTAR
Sbjct: 571 GSAFFDMVPRSAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEPGLFSLGLRTGEVRTAR 630

Query: 631 ALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVLTELGSLKPSVDPNDSSLT 690
           AL DRDA +Q L+VAV+D GQPPLSAT TL +  AD++ E+L +L S +P +    + L 
Sbjct: 631 ALGDRDAARQRLLVAVRDGGQPPLSATATLHLVFADNLQEILPDL-SDRPVLSDPQAELQ 689

Query: 691 LYLVVAVAAISCVFLAFVAVLLGLRLRR 718
            YLVVA+A IS +FL  V + + LRLRR
Sbjct: 690 FYLVVALALISVLFLLAVILAIALRLRR 717


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.134    0.382 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,158,107
Number of Sequences: 37866
Number of extensions: 1409025
Number of successful extensions: 10089
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 187
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 3039
Number of HSP's gapped (non-prelim): 652
length of query: 820
length of database: 18,247,518
effective HSP length: 111
effective length of query: 709
effective length of database: 14,044,392
effective search space: 9957473928
effective search space used: 9957473928
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.

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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.