Guide to the Human Genome
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Name: SLC25A15 Sequence: fasta or formatted (301aa) NCBI GI: 7657585
Description:

mitochondrial ornithine transporter 1

Referenced in:

Mitochondria
Solute Carrier Families
Urea Cycle, Nitric Oxide, and Polyamines

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.6         29           3
 C cysteine            3.0          9           2
 D aspartate           3.0          9           1
 E glutamate           3.3         10           1
 F phenylalanine       6.3         19           4
 G glycine             9.6         29           2
 H histidine           0.3          1           1
 I isoleucine          4.7         14           1
 K lysine              6.3         19           1
 L leucine            10.6         32           2
 M methionine          3.7         11           2
 N asparagine          3.0          9           1
 P proline             4.0         12           1
 Q glutamine           4.3         13           2
 R arginine            4.0         12           1
 S serine              7.6         23           2
 T threonine           5.3         16           1
 V valine              6.3         19           2
 W tryptophan          0.7          2           1
 Y tyrosine            4.3         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitochondrial ornithine transporter 1 
SLC25A2               0.882   solute carrier family 25 member 2 
SLC25A20              0.215   carnitine/acylcarnitine translocase 
SLC25A45              0.187   solute carrier family 25, member 45 isoform a [Homo...
SLC25A29              0.180   solute carrier family 25, member 29 
C14orf68              0.163   chromosome 14 open reading frame 68 
SLC25A45              0.131   solute carrier family 25, member 45 isoform b [Homo...
SLC25A13              0.130   solute carrier family 25, member 13 isoform 2 
SLC25A13              0.130   solute carrier family 25, member 13 isoform 1 [Homo...
SLC25A24              0.123   solute carrier family 25 member 24 isoform 1 
SLC25A24              0.123   solute carrier family 25 member 24 isoform 2 
SLC25A12              0.119   solute carrier family 25, member 12 
SLC25A23              0.116   solute carrier family 25, member 23 
SLC25A19              0.111   solute carrier family 25, member 19 
SLC25A19              0.111   solute carrier family 25, member 19 
SLC25A19              0.111   solute carrier family 25, member 19 
SLC25A1               0.109   solute carrier family 25 (mitochondrial carrier; cit...
SLC25A21              0.102   solute carrier family 25 (mitochondrial oxodicarboxy...
SLC25A34              0.097   solute carrier family 25, member 34 
SLC25A22              0.097   mitochondrial glutamate carrier 1 
LOC100292202          0.093   PREDICTED: similar to solute carrier family 25, mem...
LOC100292202          0.093   PREDICTED: similar to solute carrier family 25, mem...
SLC25A25              0.093   solute carrier family 25, member 25 isoform c 
SLC25A25              0.093   solute carrier family 25, member 25 isoform a 
SLC25A25              0.093   solute carrier family 25, member 25 isoform d 
SLC25A25              0.093   solute carrier family 25, member 25 isoform b 
SLC25A42              0.092   solute carrier family 25, member 42 
SLC25A37              0.090   solute carrier family 25, member 37 
SLC25A26              0.090   solute carrier family 25, member 26 
SLC25A18              0.090   solute carrier 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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