Guide to the Human Genome
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Name: SIGLEC7 Sequence: fasta or formatted (467aa) NCBI GI: 7657570
Description:

sialic acid binding Ig-like lectin 7 isoform 1

Referenced in:

Lectin Families

Other entries for this name:
alt prot [374aa] sialic acid binding Ig-like lectin 7 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         29           2
 C cysteine            2.4         11           1
 D aspartate           3.9         18           2
 E glutamate           4.7         22           2
 F phenylalanine       2.6         12           2
 G glycine             7.7         36           2
 H histidine           2.8         13           2
 I isoleucine          3.2         15           1
 K lysine              3.0         14           2
 L leucine            10.3         48           6
 M methionine          1.9          9           1
 N asparagine          4.9         23           2
 P proline             6.2         29           2
 Q glutamine           5.6         26           2
 R arginine            5.4         25           1
 S serine             10.5         49           3
 T threonine           7.3         34           2
 V valine              7.1         33           2
 W tryptophan          2.1         10           1
 Y tyrosine            2.4         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sialic acid binding Ig-like lectin 7 isoform 1 
SIGLEC9               0.701   sialic acid binding Ig-like lectin 9 
SIGLEC8               0.667   sialic acid binding Ig-like lectin 8 
SIGLEC12              0.653   sialic acid binding immunoglobulin-like lectin-like ...
SIGLEC12              0.648   sialic acid binding immunoglobulin-like lectin-like ...
SIGLEC7               0.471   sialic acid binding Ig-like lectin 7 isoform 2 [Hom...
SIGLEC6               0.410   sialic acid binding Ig-like lectin 6 isoform 1 prec...
SIGLEC6               0.380   sialic acid binding Ig-like lectin 6 isoform 2 prec...
SIGLEC6               0.343   sialic acid binding Ig-like lectin 6 isoform 3 prec...
SIGLEC14              0.337   sialic acid binding Ig-like lectin 14 
SIGLEC5               0.320   sialic acid binding Ig-like lectin 5 
CD33                  0.293   CD33 antigen isoform 1 precursor 
SIGLEC10              0.264   sialic acid binding Ig-like lectin 10 
SIGLEC11              0.256   sialic acid binding Ig-like lectin 11 isoform 2 [Ho...
SIGLEC11              0.256   sialic acid binding Ig-like lectin 11 isoform 1 [Ho...
CD33                  0.136   CD33 antigen isoform 2 precursor 
MAG                   0.111   myelin associated glycoprotein isoform a precursor [...
MAG                   0.111   myelin associated glycoprotein isoform b precursor [...
CD22                  0.073   CD22 molecule 
SIGLEC1               0.071   sialoadhesin precursor 
HSPG2                 0.031   heparan sulfate proteoglycan 2 
PVRL1                 0.031   poliovirus receptor-related 1 isoform 2 
PXDNL                 0.030   peroxidasin homolog-like 
MYLK                  0.029   myosin light chain kinase isoform 3A 
MYLK                  0.029   myosin light chain kinase isoform 1 
PVRL1                 0.029   poliovirus receptor-related 1 isoform 1 
PVRL2                 0.028   poliovirus receptor related 2 isoform alpha precursor...
TMIGD1                0.027   transmembrane and immunoglobulin domain containing [...
PXDN                  0.027   peroxidasin 
CADM1                 0.026   immunoglobulin superfamily, member 4D isoform 2 [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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