PCDH11X 35740

Name: PCDH11X	Sequence: fasta or formatted (1021aa)		NCBI GI: 7657443
Description: protocadherin 11 X-linked isoform a precursor		Referenced in: Cadherins and Related Proteins Gene Families
Other entries for this name: alt prot [1025aa] protocadherin 11 X-linked isoform b precursor alt prot [1347aa] protocadherin 11 X-linked isoform c alt prot [1337aa] protocadherin 11 X-linked isoform d
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.9 60 2 C cysteine 1.1 11 1 D aspartate 7.5 77 2 E glutamate 6.1 62 2 F phenylalanine 4.0 41 1 G glycine 4.2 43 2 H histidine 1.8 18 2 I isoleucine 7.1 72 2 K lysine 5.7 58 8 L leucine 8.1 83 3 M methionine 1.6 16 2 N asparagine 7.1 72 2 P proline 6.5 66 2 Q glutamine 2.8 29 1 R arginine 3.3 34 2 S serine 6.8 69 5 T threonine 7.9 81 2 V valine 10.0 102 4 W tryptophan 0.2 2 1 Y tyrosine 2.4 25 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 protocadherin 11 X-linked isoform a precursor PCDH11X 0.991 protocadherin 11 X-linked isoform b precursor PCDH11X 0.990 protocadherin 11 X-linked isoform d PCDH11X 0.990 protocadherin 11 X-linked isoform c PCDH11Y 0.968 protocadherin 11 Y-linked isoform c PCDH11Y 0.968 protocadherin 11 Y-linked isoform b PCDH11Y 0.968 protocadherin 11 Y-linked isoform a PCDH9 0.578 protocadherin 9 isoform 2 precursor PCDH9 0.578 protocadherin 9 isoform 1 precursor PCDH1 0.318 protocadherin 1 isoform 2 precursor PCDH1 0.318 protocadherin 1 isoform 1 precursor PCDH20 0.302 protocadherin 20 PCDH7 0.290 protocadherin 7 isoform b precursor PCDH7 0.290 protocadherin 7 isoform a precursor PCDH7 0.278 protocadherin 7 isoform c precursor PCDHGA10 0.170 protocadherin gamma subfamily A, 10 isoform 1 precur... PCDHGA10 0.170 protocadherin gamma subfamily A, 10 isoform 2 precur... PCDH18 0.167 protocadherin 18 precursor PCDHGA12 0.166 protocadherin gamma subfamily A, 12 isoform 1 precurs... PCDHGA12 0.166 protocadherin gamma subfamily A, 12 isoform 2 precur... PCDH17 0.165 protocadherin 17 precursor PCDH19 0.164 protocadherin 19 isoform a PCDH19 0.164 protocadherin 19 isoform b PCDHGA7 0.163 protocadherin gamma subfamily A, 7 isoform 1 precurs... PCDHGA7 0.163 protocadherin gamma subfamily A, 7 isoform 2 precurs... PCDHGB1 0.162 protocadherin gamma subfamily B, 1 isoform 2 precurs... PCDHGB1 0.162 protocadherin gamma subfamily B, 1 isoform 1 precurs... PCDH10 0.162 protocadherin 10 isoform 1 precursor PCDH10 0.162 protocadherin 10 isoform 2 precursor PCDHGA11 0.161 protocadherin gamma subfamily A, 11 isoform 2 precur... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.