Guide to the Human Genome
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Name: USP9Y Sequence: fasta or formatted (2555aa) NCBI GI: 74319833
Description:

ubiquitin specific protease 9, Y-linked

Referenced in:

Gene Families
Ubiquitin and Related Protein Modifications
Y-linked Genes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2        159           2
 C cysteine            2.4         61           2
 D aspartate           6.1        157           3
 E glutamate           6.9        176           4
 F phenylalanine       4.1        104           2
 G glycine             5.0        128           2
 H histidine           2.9         75           2
 I isoleucine          6.0        154           2
 K lysine              5.4        138           2
 L leucine            11.5        293           3
 M methionine          2.2         56           2
 N asparagine          5.4        139           2
 P proline             4.9        124           3
 Q glutamine           5.3        135           2
 R arginine            4.8        123           2
 S serine              6.7        172           3
 T threonine           3.8         97           2
 V valine              5.5        140           2
 W tryptophan          1.4         37           2
 Y tyrosine            3.4         87           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ubiquitin specific protease 9, Y-linked 
USP9X                 0.924   ubiquitin specific protease 9, X-linked isoform 4 [...
USP9X                 0.921   ubiquitin specific protease 9, X-linked isoform 3 [...
USP24                 0.177   ubiquitin specific protease 24 
USP34                 0.045   ubiquitin specific protease 34 
USP48                 0.022   ubiquitin specific protease 48 isoform a 
USP48                 0.022   ubiquitin specific protease 48 isoform b 
USP47                 0.022   ubiquitin specific protease 47 
USP7                  0.018   ubiquitin specific peptidase 7 
USP40                 0.017   ubiquitin thioesterase 40 
LOC100287238          0.013   PREDICTED: hypothetical protein XP_002342474 
USP46                 0.013   ubiquitin specific peptidase 46 isoform 2 
USP46                 0.013   ubiquitin specific peptidase 46 isoform 1 
DUB3                  0.013   deubiquitinating enzyme 3 
USP8                  0.012   ubiquitin specific peptidase 8 
USP8                  0.012   ubiquitin specific peptidase 8 
USP8                  0.012   ubiquitin specific peptidase 8 
USP36                 0.012   ubiquitin specific peptidase 36 
LOC728373             0.012   PREDICTED: similar to deubiquitinating enzyme DUB1 ...
USP17L3               0.012   PREDICTED: Ubiquitin carboxyl-terminal hydrolase 17...
LOC100287513          0.012   PREDICTED: hypothetical protein XP_002342480 
LOC100287327          0.012   PREDICTED: hypothetical protein XP_002342475 
USP12                 0.012   ubiquitin thiolesterase 12 
USP17                 0.012   ubiquitin specific peptidase 17 
LOC728379             0.012   PREDICTED: similar to deubiquitinating enzyme DUB1 ...
LOC728419             0.012   PREDICTED: similar to deubiquitinating enzyme 1 [Ho...
LOC728405             0.012   PREDICTED: similar to deubiquitinating enzyme 1 [Ho...
LOC728400             0.012   PREDICTED: similar to deubiquitinating enzyme 1 [Ho...
LOC728393             0.012   PREDICTED: similar to deubiquitinating enzyme 1 [Ho...
LOC728379             0.012   PREDICTED: similar to deubiquitinating enzyme 1 [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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