ATM 35270

Name: ATM	Sequence: fasta or formatted (3056aa)		NCBI GI: 71902540
Description: ataxia telangiectasia mutated isoform 1		Referenced in: DNases, Recombination, and DNA Repair Additional Serine / Threonine Protein Kinases
Other entries for this name: alt prot [1708aa] ataxia telangiectasia mutated isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.1 157 2 C cysteine 2.9 89 2 D aspartate 5.1 156 2 E glutamate 7.6 233 3 F phenylalanine 4.0 123 2 G glycine 3.9 119 3 H histidine 2.4 72 2 I isoleucine 5.9 179 2 K lysine 7.0 214 2 L leucine 12.7 389 3 M methionine 2.6 79 2 N asparagine 4.5 137 2 P proline 3.2 98 2 Q glutamine 5.0 154 3 R arginine 5.0 152 2 S serine 7.7 234 3 T threonine 5.2 158 3 V valine 5.9 179 3 W tryptophan 1.2 38 1 Y tyrosine 3.1 96 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ataxia telangiectasia mutated isoform 1 LOC651610 0.959 PREDICTED: similar to Serine-protein kinase ATM, pa... ATM 0.558 ataxia telangiectasia mutated isoform 2 ATR 0.033 ataxia telangiectasia and Rad3 related protein [Hom... LOC648152 0.033 PREDICTED: similar to ataxia telangiectasia and Rad... MTOR 0.025 FK506 binding protein 12-rapamycin associated protein... SMG1 0.024 PI-3-kinase-related kinase SMG-1 PRKDC 0.018 protein kinase, DNA-activated, catalytic polypeptide... LOC651921 0.015 PREDICTED: similar to ataxia telangiectasia and Rad... PRKDC 0.014 protein kinase, DNA-activated, catalytic polypeptid... LOC731751 0.014 PREDICTED: similar to protein kinase, DNA-activated... PIK3C3 0.008 catalytic phosphatidylinositol 3-kinase 3 PIK3CB 0.006 catalytic phosphatidylinositol 3-kinase beta PIK3CD 0.005 catalytic phosphatidylinositol 3-kinase delta [Homo... PIK3CG 0.004 phosphoinositide-3-kinase, catalytic, gamma polypept... TRRAP 0.004 transformation/transcription domain-associated protei... PI4KB 0.004 catalytic phosphatidylinositol 4-kinase beta PIK3C2G 0.004 phosphoinositide-3-kinase, class 2 gamma polypeptid... PIK3CA 0.003 phosphoinositide-3-kinase, catalytic, alpha polypept... C14orf38 0.003 PREDICTED: hypothetical protein C14orf38 0.003 PREDICTED: hypothetical protein C14orf38 0.003 PREDICTED: hypothetical protein CCDC88A 0.002 coiled-coil domain containing 88A isoform 2 CCDC88A 0.002 coiled-coil domain containing 88A isoform 1 PI4KA 0.002 phosphatidylinositol 4-kinase type 3 alpha isoform 1 ... PI4KA 0.002 phosphatidylinositol 4-kinase type 3 alpha isoform ... LOC100293141 0.002 PREDICTED: similar to phosphatidylinositol 4-kinase... STK17A 0.002 serine/threonine kinase 17a CCDC46 0.002 coiled-coil domain containing 46 isoform a EIF4G2 0.002 eukaryotic translation initiation factor 4 gamma, 2... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.