Guide to the Human Genome
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Name: PREPL Sequence: fasta or formatted (727aa) NCBI GI: 70778815
Description:

prolyl endopeptidase-like isoform C

Referenced in:

Serine Proteases

Other entries for this name:
alt prot [665aa] prolyl endopeptidase-like isoform E
alt prot [661aa] prolyl endopeptidase-like isoform D
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7         34           2
 C cysteine            2.3         17           2
 D aspartate           6.7         49           2
 E glutamate           7.8         57           2
 F phenylalanine       4.5         33           2
 G glycine             4.7         34           3
 H histidine           3.2         23           1
 I isoleucine          5.1         37           2
 K lysine              8.7         63           2
 L leucine            10.6         77           2
 M methionine          2.1         15           2
 N asparagine          4.8         35           1
 P proline             5.4         39           2
 Q glutamine           3.4         25           2
 R arginine            4.0         29           2
 S serine              4.8         35           2
 T threonine           5.8         42           2
 V valine              5.8         42           1
 W tryptophan          1.1          8           1
 Y tyrosine            4.5         33           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   prolyl endopeptidase-like isoform C 
PREPL                 0.522   prolyl endopeptidase-like isoform D 
PREPL                 0.465   prolyl endopeptidase-like isoform E 
PREP                  0.051   prolyl endopeptidase 
KIAA1407              0.007   hypothetical protein LOC57577 
CCDC88A               0.004   coiled-coil domain containing 88A isoform 2 
CCDC88A               0.004   coiled-coil domain containing 88A isoform 1 
KIF4A                 0.003   kinesin family member 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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