Search of human proteins with 13899269

Search of human proteins with 13899269

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|13899269 SRY-box 7 [Homo sapiens]
         (388 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|13899269 SRY-box 7 [Homo sapiens]                                  815   0.0  
gi|11967991 SRY-box 17 [Homo sapiens]                                 230   1e-60
gi|8924248 SRY-box 18 [Homo sapiens]                                  222   4e-58
gi|30179900 SRY (sex determining region Y)-box 1 [Homo sapiens]       129   3e-30
gi|4557853 transcription factor SOX9 [Homo sapiens]                   121   1e-27
gi|4507161 SRY-box 11 [Homo sapiens]                                  120   3e-27
gi|5902104 SRY (sex determining region Y)-box 10 [Homo sapiens]       119   4e-27
gi|21264339 SRY (sex determining region Y)-box 12 [Homo sapiens]      119   4e-27
gi|4507163 SRY (sex determining region Y)-box 4 [Homo sapiens]        119   5e-27
gi|30061556 SRY (sex determining region Y)-box 3 [Homo sapiens]       119   5e-27
gi|30179903 SRY (sex determining region Y)-box 8 [Homo sapiens]       117   2e-26
gi|5902106 SRY-box 15 [Homo sapiens]                                  117   2e-26
gi|28195386 sex-determining region Y-box 2 [Homo sapiens]             116   3e-26
gi|4759162 SRY-box 14 [Homo sapiens]                                  116   3e-26
gi|5902108 SRY-box 21 [Homo sapiens]                                  112   6e-25
gi|30061558 SRY (sex determining region Y)-box 5 isoform c [Homo...   109   4e-24
gi|23308715 SRY (sex determining region Y)-box 5 isoform b [Homo...   109   4e-24
gi|23308713 SRY (sex determining region Y)-box 5 isoform a [Homo...   109   4e-24
gi|4507225 sex determining region Y [Homo sapiens]                    106   3e-23
gi|224967054 SRY (sex determining region Y)-box 6 isoform 4 [Hom...   105   7e-23
gi|224967050 SRY (sex determining region Y)-box 6 isoform 3 [Hom...   105   7e-23
gi|70909338 SRY (sex determining region Y)-box 6 isoform 1 [Homo...   105   7e-23
gi|41406089 SRY-box 13 [Homo sapiens]                                 105   7e-23
gi|71037389 SRY (sex determining region Y)-box 6 isoform 2 [Homo...   104   1e-22
gi|5902112 SRY (sex determining region Y)-box 30 isoform b [Homo...    92   8e-19
gi|30581117 SRY (sex determining region Y)-box 30 isoform a [Hom...    92   8e-19
gi|112421108 capicua homolog [Homo sapiens]                            64   2e-10
gi|217035121 HMG-BOX transcription factor BBX isoform 1 [Homo sa...    62   1e-09
gi|18378731 HMG-BOX transcription factor BBX isoform 2 [Homo sap...    62   1e-09
gi|226371764 transcription factor 7-like 2 isoform 1 [Homo sapiens]    57   4e-08

>gi|13899269 SRY-box 7 [Homo sapiens]
          Length = 388

 Score =  815 bits (2106), Expect = 0.0
 Identities = 388/388 (100%), Positives = 388/388 (100%)

Query: 1   MASLLGAYPWPEGLECPALDAELSDGQSPPAVPRPPGDKGSESRIRRPMNAFMVWAKDER 60
           MASLLGAYPWPEGLECPALDAELSDGQSPPAVPRPPGDKGSESRIRRPMNAFMVWAKDER
Sbjct: 1   MASLLGAYPWPEGLECPALDAELSDGQSPPAVPRPPGDKGSESRIRRPMNAFMVWAKDER 60

Query: 61  KRLAVQNPDLHNAELSKMLGKSWKALTLSQKRPYVDEAERLRLQHMQDYPNYKYRPRRKK 120
           KRLAVQNPDLHNAELSKMLGKSWKALTLSQKRPYVDEAERLRLQHMQDYPNYKYRPRRKK
Sbjct: 61  KRLAVQNPDLHNAELSKMLGKSWKALTLSQKRPYVDEAERLRLQHMQDYPNYKYRPRRKK 120

Query: 121 QAKRLCKRVDPGFLLSSLSRDQNALPEKRSGSRGALGEKEDRGEYSPGTALPSLRGCYHE 180
           QAKRLCKRVDPGFLLSSLSRDQNALPEKRSGSRGALGEKEDRGEYSPGTALPSLRGCYHE
Sbjct: 121 QAKRLCKRVDPGFLLSSLSRDQNALPEKRSGSRGALGEKEDRGEYSPGTALPSLRGCYHE 180

Query: 181 GPAGGGGGGTPSSVDTYPYGLPTPPEMSPLDVLEPEQTFFSSPCQEEHGHPRRIPHLPGH 240
           GPAGGGGGGTPSSVDTYPYGLPTPPEMSPLDVLEPEQTFFSSPCQEEHGHPRRIPHLPGH
Sbjct: 181 GPAGGGGGGTPSSVDTYPYGLPTPPEMSPLDVLEPEQTFFSSPCQEEHGHPRRIPHLPGH 240

Query: 241 PYSPEYAPSPLHCSHPLGSLALGQSPGVSMMSPVPGCPPSPAYYSPATYHPLHSNLQAHL 300
           PYSPEYAPSPLHCSHPLGSLALGQSPGVSMMSPVPGCPPSPAYYSPATYHPLHSNLQAHL
Sbjct: 241 PYSPEYAPSPLHCSHPLGSLALGQSPGVSMMSPVPGCPPSPAYYSPATYHPLHSNLQAHL 300

Query: 301 GQLSPPPEHPGFDALDQLSQVELLGDMDRNEFDQYLNTPGHPDSATGAMALSGHVPVSQV 360
           GQLSPPPEHPGFDALDQLSQVELLGDMDRNEFDQYLNTPGHPDSATGAMALSGHVPVSQV
Sbjct: 301 GQLSPPPEHPGFDALDQLSQVELLGDMDRNEFDQYLNTPGHPDSATGAMALSGHVPVSQV 360

Query: 361 TPTGPTETSLISVLADATATYYNSYSVS 388
           TPTGPTETSLISVLADATATYYNSYSVS
Sbjct: 361 TPTGPTETSLISVLADATATYYNSYSVS 388


>gi|11967991 SRY-box 17 [Homo sapiens]
          Length = 414

 Score =  230 bits (587), Expect = 1e-60
 Identities = 173/415 (41%), Positives = 217/415 (52%), Gaps = 64/415 (15%)

Query: 5   LGAYPWPEGLECPALDAELSDGQSPPAVPRPPGDKG---SESRIRRPMNAFMVWAKDERK 61
           LG  PW E L  P  D ++  G++P     P G  G    ESRIRRPMNAFMVWAKDERK
Sbjct: 27  LGPCPWAESLS-PIGDMKVK-GEAPANSGAPAGAAGRAKGESRIRRPMNAFMVWAKDERK 84

Query: 62  RLAVQNPDLHNAELSKMLGKSWKALTLSQKRPYVDEAERLRLQHMQDYPNYKYRPRRKKQ 121
           RLA QNPDLHNAELSKMLGKSWKALTL++KRP+V+EAERLR+QHMQD+PNYKYRPRR+KQ
Sbjct: 85  RLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQ 144

Query: 122 AKRLCKRVDPGFLLSSLSRDQNAL-PEKRSGSRGALGEKEDRGEYSPGTAL--PSLRGCY 178
            KRL KRV+ GFL         AL PE    +   LG +     +  G  L  P + G Y
Sbjct: 145 VKRL-KRVEGGFLHGLAEPQAAALGPEGGRVAMDGLGLQFPEQGFPAGPPLLPPHMGGHY 203

Query: 179 HEGPAGGGGGGTPSSVDTYPYGLPTPPEMSPLDVLEPEQTFFSSPCQ------------- 225
            +  + G        +D YP  LPT P+ SPLD ++P+  FF++P               
Sbjct: 204 RDCQSLGA-----PPLDGYP--LPT-PDTSPLDGVDPDPAFFAAPMPGDCPAAGTYSYAQ 255

Query: 226 -EEHGHPRRIPHLPGHP-YSPEYA----------PSPLHCSH-PLGSLALGQSPGVSMMS 272
             ++  P   P  P HP   PE A          PS LH  +  +GS   G   G  M  
Sbjct: 256 VSDYAGPPEPPAGPMHPRLGPEPAGPSIPGLLAPPSALHVYYGAMGSPGAGGGRGFQMQ- 314

Query: 273 PVPGCPPSPAYYSPATYHPLHSNLQAHLGQLSPPPEH-PGFDALDQLSQVELLGDMDRNE 331
                 P   +     +HP         GQ SPPPE  P  D  D     ELLG++DR E
Sbjct: 315 ------PQHQHQHQHQHHP------PGPGQPSPPPEALPCRDGTDPSQPAELLGEVDRTE 362

Query: 332 FDQYLNTPGHPDSATGAMALSGHVPVSQVTPTGPTETSLISVLADA-TATYYNSY 385
           F+QYL+    P+     +   GH           +  ++ SV++DA +A YY +Y
Sbjct: 363 FEQYLHFVCKPEM---GLPYQGH---DSGVNLPDSHGAISSVVSDASSAVYYCNY 411


>gi|8924248 SRY-box 18 [Homo sapiens]
          Length = 384

 Score =  222 bits (566), Expect = 4e-58
 Identities = 171/411 (41%), Positives = 209/411 (50%), Gaps = 81/411 (19%)

Query: 2   ASLLGAYPWPEGLECPALDAELSDGQ-SPPAVPRP------PGDKGS-----ESRIRRPM 49
           A   G    P  L  PA  A     Q SPP  P P      P  +G      ESRIRRPM
Sbjct: 30  ADTRGLAAGPAALAAPAAPASPPSPQRSPPRSPEPGRYGLSPAGRGERQAADESRIRRPM 89

Query: 50  NAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALTLSQKRPYVDEAERLRLQHMQDY 109
           NAFMVWAKDERKRLA QNPDLHNA LSKMLGK+WK L  ++KRP+V+EAERLR+QH++D+
Sbjct: 90  NAFMVWAKDERKRLAQQNPDLHNAVLSKMLGKAWKELNAAEKRPFVEEAERLRVQHLRDH 149

Query: 110 PNYKYRPRRKKQAKRLCKRVDPGFLLSSLSRDQNALPE---KRSGSRGALGEKEDRGEYS 166
           PNYKYRPRRKKQA++  +R++PG LL  L+  Q   PE     SGS  A  E        
Sbjct: 150 PNYKYRPRRKKQARK-ARRLEPGLLLPGLAPPQPP-PEPFPAASGSARAFRE-------- 199

Query: 167 PGTALPSLRGCYHEGPAGGGGGGTPSSVDTYPYGLPTPPEMSPLDVLEP-EQTFFSSPCQ 225
               LP L G   +G                  GLPT PE SPLD LEP E  FF  P  
Sbjct: 200 ----LPPL-GAEFDG-----------------LGLPT-PERSPLDGLEPGEAAFFPPPAA 236

Query: 226 EEHGHPRRIPHLPGHPYSPEYAPSPLHCSHPLGSLALGQSPGVSMMSPVPGCPPSPAYY- 284
            E    R        P+   YAP+ L    P G    G     ++ +  P  P +  YY 
Sbjct: 237 PEDCALR--------PFRAPYAPTEL-SRDPGG--CYGAPLAEALRTAPPAAPLAGLYYG 285

Query: 285 ---SPATYHPLHSNLQAHLGQLSPPPEHPGFDALDQLS-QVELLGDMDRNEFDQYLNTPG 340
              +P  Y           G LSPPPE P  ++ + L    +L  D+D  EFDQYLN   
Sbjct: 286 TLGTPGPYP----------GPLSPPPEAPPLESAEPLGPAADLWADVDLTEFDQYLNCSR 335

Query: 341 HPDSATGAMALSGHVPVSQVTPTG---PTETSLISVLADATATYYNSYSVS 388
               A G   L  HV ++++ P     P E+SLIS L+DA++  Y S  +S
Sbjct: 336 TRPDAPG---LPYHVALAKLGPRAMSCPEESSLISALSDASSAVYYSACIS 383


>gi|30179900 SRY (sex determining region Y)-box 1 [Homo sapiens]
          Length = 391

 Score =  129 bits (325), Expect = 3e-30
 Identities = 90/271 (33%), Positives = 136/271 (50%), Gaps = 31/271 (11%)

Query: 37  GDKGSESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALTLSQKRPYVD 96
           G K ++ R++RPMNAFMVW++ +R+++A +NP +HN+E+SK LG  WK ++ ++KRP++D
Sbjct: 43  GAKANQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFID 102

Query: 97  EAERLRLQHMQDYPNYKYRPRRKKQAKRLCKRVDPGFLLSSLSRDQNALPEKRSGSRGAL 156
           EA+RLR  HM+++P+YKYRPRRK   K L K+        SL+    A      G+  A+
Sbjct: 103 EAKRLRALHMKEHPDYKYRPRRK--TKTLLKKDK-----YSLAGGLLAAGAGGGGAAVAM 155

Query: 157 GEKEDRGEYSPGTALPSLRGCYHEGPAGGGGGGTPS----SVDTYPYGLPTPPEMSPLDV 212
           G     G  + G  L        E P G  GGG       +   YP  +      + + +
Sbjct: 156 GVGVGVGAAAVGQRL--------ESPGGAAGGGYAHVNGWANGAYPGSVAAAAAAAAM-M 206

Query: 213 LEPEQTFFSSP---CQEEHGHPRRIPHLPGHPYSPEYAPSPLHCSHPLGSL---ALGQSP 266
            E +  +   P       H HP   PH P HP++  + P P+H  + +G+L    +  S 
Sbjct: 207 QEAQLAYGQHPGAGGAHPHAHPAH-PH-PHHPHAHPHNPQPMH-RYDMGALQYSPISNSQ 263

Query: 267 GVSMMSP--VPGCPPSPAYYSPATYHPLHSN 295
           G    SP    G P   A  + A     H N
Sbjct: 264 GYMSASPSGYGGLPYGAAAAAAAAAGGAHQN 294


>gi|4557853 transcription factor SOX9 [Homo sapiens]
          Length = 509

 Score =  121 bits (303), Expect = 1e-27
 Identities = 103/335 (30%), Positives = 140/335 (41%), Gaps = 41/335 (12%)

Query: 30  PAVPRPPGDKGSESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALTLS 89
           P   R  G   ++  ++RPMNAFMVWA+  R++LA Q P LHNAELSK LGK W+ L  S
Sbjct: 90  PMPVRVNGSSKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNES 149

Query: 90  QKRPYVDEAERLRLQHMQDYPNYKYRPRRKKQAKRLCKRVDPGFLLSSLSRDQ--NALPE 147
           +KRP+V+EAERLR+QH +D+P+YKY+PRR+K  K      +     + +S +    AL  
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQAEAEEATEQTHISPNAIFKALQA 209

Query: 148 KRSGSRGALGEKEDRGEYSPGTALPSLRGCYHEGPAGGGGGGTPSSVDTYPYGLPTPP-- 205
               S   + E    GE+S  +  P       +     G           P G   PP  
Sbjct: 210 DSPHSSSGMSEVHSPGEHSGQSQGPPTPPTTPKTDVQPGKADLKREGRPLPEGGRQPPID 269

Query: 206 -------EMSPLDVLEPEQTFFSSPCQE---EHGHPRRIPHLPGH-PYSPEY-----APS 249
                  E+S  DV+   +TF  +   +    +GHP  +P   G   Y+  Y     A +
Sbjct: 270 FRDVDIGELSS-DVISNIETFDVNEFDQYLPPNGHP-GVPATHGQVTYTGSYGISSTAAT 327

Query: 250 PLHCSHPLGSLALGQSPGVS---MMSPVPGCPPSPAYYSPATYHPLHSNLQAHLGQLSPP 306
           P    H   S      P         P P  PP P    P               Q + P
Sbjct: 328 PASAGHVWMSKQQAPPPPPQQPPQAPPAPQAPPQPQAAPPQ--------------QPAAP 373

Query: 307 PEHPGFDALDQLSQVELLGDMDRNEFDQYLNTPGH 341
           P+ P    L  LS     G   R        +P H
Sbjct: 374 PQQPQAHTLTTLSSEP--GQSQRTHIKTEQLSPSH 406



 Score = 30.8 bits (68), Expect = 2.2
 Identities = 26/94 (27%), Positives = 37/94 (39%), Gaps = 8/94 (8%)

Query: 278 PPSPAYYSPATYHPLHSNLQAHLGQLSPPPEHPGFDALD----QLSQ--VELLGDMDRNE 331
           PP+P         P  ++L+     L      P  D  D    +LS   +  +   D NE
Sbjct: 234 PPTPPTTPKTDVQPGKADLKREGRPLPEGGRQPPIDFRDVDIGELSSDVISNIETFDVNE 293

Query: 332 FDQYLNTPGHP--DSATGAMALSGHVPVSQVTPT 363
           FDQYL   GHP   +  G +  +G   +S    T
Sbjct: 294 FDQYLPPNGHPGVPATHGQVTYTGSYGISSTAAT 327


>gi|4507161 SRY-box 11 [Homo sapiens]
          Length = 441

 Score =  120 bits (300), Expect = 3e-27
 Identities = 74/180 (41%), Positives = 96/180 (53%), Gaps = 41/180 (22%)

Query: 18  ALDAELSDGQ--SPPAVPRPPGD--KGSESRIRRPMNAFMVWAKDERKRLAVQNPDLHNA 73
           ALD E  +    SP A+     D  K +   I+RPMNAFMVW+K ER+++  Q+PD+HNA
Sbjct: 18  ALDTEEGEFMACSPVALDESDPDWCKTASGHIKRPMNAFMVWSKIERRKIMEQSPDMHNA 77

Query: 74  ELSKMLGKSWKALTLSQKRPYVDEAERLRLQHMQDYPNYKYRPRRKKQAKRLCKRVDPGF 133
           E+SK LGK WK L  S+K P++ EAERLRL+HM DYP+YKYRPR+K        ++DP  
Sbjct: 78  EISKRLGKRWKMLKDSEKIPFIREAERLRLKHMADYPDYKYRPRKKP-------KMDP-- 128

Query: 134 LLSSLSRDQNALPEKRSGSRGALGEKEDRGEYSPGTALPSLRGCYHEGPAGGGGGGTPSS 193
              S     +  PEK +   G                          G AGGG GG  +S
Sbjct: 129 ---SAKPSASQSPEKSAAGGGG-------------------------GSAGGGAGGAKTS 160


>gi|5902104 SRY (sex determining region Y)-box 10 [Homo sapiens]
          Length = 466

 Score =  119 bits (299), Expect = 4e-27
 Identities = 105/322 (32%), Positives = 143/322 (44%), Gaps = 41/322 (12%)

Query: 30  PAVPRPPGDKGSESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALTLS 89
           P   R  G   S+  ++RPMNAFMVWA+  R++LA Q P LHNAELSK LGK W+ L  S
Sbjct: 89  PMPVRVNGASKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNES 148

Query: 90  QKRPYVDEAERLRLQHMQDYPNYKYRPRRKKQAKRL-----CK--RVDPGFLLSSLSRDQ 142
            KRP+++EAERLR+QH +D+P+YKY+PRR+K  K       C     + G   +  +  +
Sbjct: 149 DKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKAAQGEAECPGGEAEQGGTAAIQAHYK 208

Query: 143 NALPEKR---SGSRGALGEKEDRGEYS---------PGTALPSLRGCYHEGPAGGGGGGT 190
           +A  + R    GS  + G  E     S         P T L S +          G GG 
Sbjct: 209 SAHLDHRHPGEGSPMSDGNPEHPSGQSHGPPTPPTTPKTELQSGKADPKRDGRSMGEGGK 268

Query: 191 P----SSVDTYPYGLPTPPEMSPLDVLEPEQTFFSSPCQEEHGHPRRIP--HLPGHPYSP 244
           P     +VD           M   DV E +Q          +GHP  +      G+    
Sbjct: 269 PHIDFGNVDIGEISHEVMSNMETFDVAELDQYL------PPNGHPGHVSSYSAAGYGLGS 322

Query: 245 EYAPSPLH---CSHPLG-SLALGQSPGVSMMSPV---PGCPPSPAYYS--PATYHPLHSN 295
             A +  H    S P G +L     PGV   + V      P  P +Y+  P+T    +++
Sbjct: 323 ALAVASGHSAWISKPPGVALPTVSPPGVDAKAQVKTETAGPQGPPHYTDQPSTSQIAYTS 382

Query: 296 LQ-AHLGQLSPPPEHPGFDALD 316
           L   H G   P    P FD  D
Sbjct: 383 LSLPHYGSAFPSISRPQFDYSD 404


>gi|21264339 SRY (sex determining region Y)-box 12 [Homo sapiens]
          Length = 315

 Score =  119 bits (299), Expect = 4e-27
 Identities = 72/179 (40%), Positives = 88/179 (49%), Gaps = 32/179 (17%)

Query: 25  DGQSPPAVPRPPGDKGSE--------SRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELS 76
           DG  PP  P P  +   E          I+RPMNAFMVW++ ER+++  Q PD+HNAE+S
Sbjct: 12  DGGPPPPGPGPAEEGAREPGWCKTPSGHIKRPMNAFMVWSQHERRKIMDQWPDMHNAEIS 71

Query: 77  KMLGKSWKALTLSQKRPYVDEAERLRLQHMQDYPNYKYRPRRKKQAKRLCKRVDPGFLLS 136
           K LG+ W+ L  S+K P+V EAERLRL+HM DYP+YKYRPR+K                 
Sbjct: 72  KRLGRRWQLLQDSEKIPFVREAERLRLKHMADYPDYKYRPRKK----------------- 114

Query: 137 SLSRDQNALPEKRSGSRGALGEKEDRGEYSPGTALPSLRGCYHEGPAGGGGGGTPSSVD 195
           S      A P    GS G            PG  LP   G    G   GGG   P   D
Sbjct: 115 SKGAPAKARPRPPGGSGGG-------SRLKPGPQLPGRGGRRAAGGPLGGGAAAPEDDD 166


>gi|4507163 SRY (sex determining region Y)-box 4 [Homo sapiens]
          Length = 474

 Score =  119 bits (298), Expect = 5e-27
 Identities = 70/164 (42%), Positives = 90/164 (54%), Gaps = 19/164 (11%)

Query: 35  PPGDKGSESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALTLSQKRPY 94
           P   K     I+RPMNAFMVW++ ER+++  Q+PD+HNAE+SK LGK WK L  S K P+
Sbjct: 49  PSWCKTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPF 108

Query: 95  VDEAERLRLQHMQDYPNYKYRPRRKKQAKRLCKRVDPGFLLSSLSRDQNALPEKRSGSRG 154
           + EAERLRL+HM DYP+YKYRPR         K+V  G   SS S   ++ P        
Sbjct: 109 IREAERLRLKHMADYPDYKYRPR---------KKVKSGNANSSSSAAASSKP-------- 151

Query: 155 ALGEKEDRGEYSPGTALPSLRGCYHEGPAGGGGGGTPSSVDTYP 198
             GEK D+   S G       G       GGGGG +    ++ P
Sbjct: 152 --GEKGDKVGGSGGGGHGGGGGGGSSNAGGGGGGASGGGANSKP 193


>gi|30061556 SRY (sex determining region Y)-box 3 [Homo sapiens]
          Length = 446

 Score =  119 bits (298), Expect = 5e-27
 Identities = 105/344 (30%), Positives = 147/344 (42%), Gaps = 81/344 (23%)

Query: 37  GDKGSESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALTLSQKRPYVD 96
           G    + R++RPMNAFMVW++ +R+++A++NP +HN+E+SK LG  WK LT ++KRP++D
Sbjct: 131 GGGTDQDRVKRPMNAFMVWSRGQRRKMALENPKMHNSEISKRLGADWKLLTDAEKRPFID 190

Query: 97  EAERLRLQHMQDYPNYKYRPRRKKQAKRLCKRVDPGFLLSSLSRDQNALPEKRSGSRGAL 156
           EA+RLR  HM++YP+YKYRPRRK +              + L +D+ +LP          
Sbjct: 191 EAKRLRAVHMKEYPDYKYRPRRKTK--------------TLLKKDKYSLPS--------- 227

Query: 157 GEKEDRGEYSPGTALPSLRGCYHEGPAGGGGGGTPSSVDTYPY----------------G 200
                 G   PG A  +         A     G    +DTY +                G
Sbjct: 228 ------GLLPPGAAAAAAAAA-AAAAAASSPVGVGQRLDTYTHVNGWANGAYSLVQEQLG 280

Query: 201 LPTPPEMSPLDVLEPEQTFFSSPCQEEHGHPRRIPHLPGHPYSPEYAPSPLHCSHPLGSL 260
              PP M             SSP       P     + G  YSP   P     S+   + 
Sbjct: 281 YAQPPSM-------------SSPPPPPALPPMHRYDMAGLQYSPMMPPGAQ--SYMNVAA 325

Query: 261 ALGQSPGVSMMSPVPGCPPSPAY-YSPATYHPLHSNLQA-HLGQL---------SPPPEH 309
           A   + G   M+P      + AY   PAT     +   A  LG +         SPPP  
Sbjct: 326 AAAAASGYGGMAPSATAAAAAAYGQQPATAAAAAAAAAAMSLGPMGSVVKSEPSSPPP-- 383

Query: 310 PGFDALDQLSQVELLGDMDRNEFDQYLNTPGHPDSATGAMALSG 353
               A+   SQ   LGD+ R+    YL  P   D+A  A  L G
Sbjct: 384 ----AIASHSQRACLGDL-RDMISMYL--PPGGDAADAASPLPG 420


>gi|30179903 SRY (sex determining region Y)-box 8 [Homo sapiens]
          Length = 446

 Score =  117 bits (293), Expect = 2e-26
 Identities = 52/83 (62%), Positives = 70/83 (84%)

Query: 41  SESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALTLSQKRPYVDEAER 100
           ++  ++RPMNAFMVWA+  R++LA Q P LHNAELSK LGK W+ L+ S+KRP+V+EAER
Sbjct: 98  AKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLSESEKRPFVEEAER 157

Query: 101 LRLQHMQDYPNYKYRPRRKKQAK 123
           LR+QH +D+P+YKY+PRR+K AK
Sbjct: 158 LRVQHKKDHPDYKYQPRRRKSAK 180


>gi|5902106 SRY-box 15 [Homo sapiens]
          Length = 233

 Score =  117 bits (293), Expect = 2e-26
 Identities = 88/258 (34%), Positives = 117/258 (45%), Gaps = 55/258 (21%)

Query: 14  LECPALDAELSDGQSPP-----AVPRPPGDKGSESRIRRPMNAFMVWAKDERKRLAVQNP 68
           LE PA  A  S    P        P  PG    E +++RPMNAFMVW+  +R+++A QNP
Sbjct: 14  LEPPAATAAASSSSGPQEREGAGSPAAPGTLPLE-KVKRPMNAFMVWSSAQRRQMAQQNP 72

Query: 69  DLHNAELSKMLGKSWKALTLSQKRPYVDEAERLRLQHMQDYPNYKYRPRRKKQAKRLCKR 128
            +HN+E+SK LG  WK L   +KRP+V+EA+RLR +H++DYP+YKYRPRRK         
Sbjct: 73  KMHNSEISKRLGAQWKLLDEDEKRPFVEEAKRLRARHLRDYPDYKYRPRRK--------- 123

Query: 129 VDPGFLLSSLSRDQNALPEKRSGSRGALGEKEDRGEYSPGTALPSLRGCYHEGPAGGGGG 188
                     ++   A P +    RG L        + PG A           P+ G G 
Sbjct: 124 ----------AKSSGAGPSRCGQGRGNLASGGPL--WGPGYATTQ--------PSRGFGY 163

Query: 189 GTPSSVDTYPYGLPTPPEMSPLDVLEPEQTFFSSPCQEEHGHPRRIPHL---------PG 239
             PS    Y   LP     S   +  P      SPC      PR    L         PG
Sbjct: 164 RPPSYSTAY---LPGSYGSSHCKLEAP------SPCSLPQSDPRLQGELLPTYTHYLPPG 214

Query: 240 H--PYSPEYAPSPLHCSH 255
              PY+P  A +P+  +H
Sbjct: 215 SPTPYNPPLAGAPMPLTH 232


>gi|28195386 sex-determining region Y-box 2 [Homo sapiens]
          Length = 317

 Score =  116 bits (291), Expect = 3e-26
 Identities = 54/112 (48%), Positives = 79/112 (70%), Gaps = 1/112 (0%)

Query: 26  GQSPPAVPRPPGDKGSESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKA 85
           G +  A       K S  R++RPMNAFMVW++ +R+++A +NP +HN+E+SK LG  WK 
Sbjct: 22  GGNSTAAAAGGNQKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKL 81

Query: 86  LTLSQKRPYVDEAERLRLQHMQDYPNYKYRPRRK-KQAKRLCKRVDPGFLLS 136
           L+ ++KRP++DEA+RLR  HM+++P+YKYRPRRK K   +  K   PG LL+
Sbjct: 82  LSETEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKDKYTLPGGLLA 133


>gi|4759162 SRY-box 14 [Homo sapiens]
          Length = 240

 Score =  116 bits (291), Expect = 3e-26
 Identities = 77/203 (37%), Positives = 105/203 (51%), Gaps = 19/203 (9%)

Query: 45  IRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALTLSQKRPYVDEAERLRLQ 104
           I+RPMNAFMVW++ +R+++A +NP +HN+E+SK LG  WK L+ ++KRPY+DEA+RLR Q
Sbjct: 8   IKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLRAQ 67

Query: 105 HMQDYPNYKYRPRRKKQAKRLCKRVDPGFLLSSLSRDQNALPEKRSG-----SRGALGEK 159
           HM+++P+YKYRPRRK   K L K+    F L  L    +  P K +G     S G L   
Sbjct: 68  HMKEHPDYKYRPRRK--PKNLLKKDRYVFPLPYLG---DTDPLKAAGLPVGASDGLLSAP 122

Query: 160 EDRGEYSPGTALPSLRGCYHEGPAGGGGGGTPSSVDTYPYGLPTP--PEMSPLDVLEPEQ 217
           E    + P  + P     Y               +   P+ L T   P  S L       
Sbjct: 123 EKARAFLPPASAP-----YSLLDPAQFSSSAIQKMGEVPHTLATGALPYASTLGYQNGAF 177

Query: 218 TFFSSPCQEEHGHPRRIPHLPGH 240
              S P Q  H HP   P  PG+
Sbjct: 178 GSLSCPSQHTHTHPS--PTNPGY 198


>gi|5902108 SRY-box 21 [Homo sapiens]
          Length = 276

 Score =  112 bits (280), Expect = 6e-25
 Identities = 45/75 (60%), Positives = 65/75 (86%)

Query: 45  IRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALTLSQKRPYVDEAERLRLQ 104
           ++RPMNAFMVW++ +R+++A +NP +HN+E+SK LG  WK LT S+KRP++DEA+RLR  
Sbjct: 8   VKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDEAKRLRAM 67

Query: 105 HMQDYPNYKYRPRRK 119
           HM+++P+YKYRPRRK
Sbjct: 68  HMKEHPDYKYRPRRK 82


>gi|30061558 SRY (sex determining region Y)-box 5 isoform c [Homo
           sapiens]
          Length = 377

 Score =  109 bits (273), Expect = 4e-24
 Identities = 51/102 (50%), Positives = 72/102 (70%), Gaps = 1/102 (0%)

Query: 20  DAELSDGQSPPAVPRPPGDKGS-ESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKM 78
           D++ S G S   + R    +GS E  I+RPMNAFMVWAKDER+++    PD+HN+ +SK+
Sbjct: 144 DSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKI 203

Query: 79  LGKSWKALTLSQKRPYVDEAERLRLQHMQDYPNYKYRPRRKK 120
           LG  WKA+T  +K+PY +E  RL  QH++ YP+YKY+PR K+
Sbjct: 204 LGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKR 245


>gi|23308715 SRY (sex determining region Y)-box 5 isoform b [Homo
           sapiens]
          Length = 750

 Score =  109 bits (273), Expect = 4e-24
 Identities = 51/102 (50%), Positives = 72/102 (70%), Gaps = 1/102 (0%)

Query: 20  DAELSDGQSPPAVPRPPGDKGS-ESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKM 78
           D++ S G S   + R    +GS E  I+RPMNAFMVWAKDER+++    PD+HN+ +SK+
Sbjct: 517 DSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKI 576

Query: 79  LGKSWKALTLSQKRPYVDEAERLRLQHMQDYPNYKYRPRRKK 120
           LG  WKA+T  +K+PY +E  RL  QH++ YP+YKY+PR K+
Sbjct: 577 LGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKR 618


>gi|23308713 SRY (sex determining region Y)-box 5 isoform a [Homo
           sapiens]
          Length = 763

 Score =  109 bits (273), Expect = 4e-24
 Identities = 51/102 (50%), Positives = 72/102 (70%), Gaps = 1/102 (0%)

Query: 20  DAELSDGQSPPAVPRPPGDKGS-ESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKM 78
           D++ S G S   + R    +GS E  I+RPMNAFMVWAKDER+++    PD+HN+ +SK+
Sbjct: 530 DSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKI 589

Query: 79  LGKSWKALTLSQKRPYVDEAERLRLQHMQDYPNYKYRPRRKK 120
           LG  WKA+T  +K+PY +E  RL  QH++ YP+YKY+PR K+
Sbjct: 590 LGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKR 631


>gi|4507225 sex determining region Y [Homo sapiens]
          Length = 204

 Score =  106 bits (265), Expect = 3e-23
 Identities = 51/109 (46%), Positives = 75/109 (68%), Gaps = 7/109 (6%)

Query: 42  ESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALTLSQKRPYVDEAERL 101
           + R++RPMNAF+VW++D+R+++A++NP + N+E+SK LG  WK LT ++K P+  EA++L
Sbjct: 57  QDRVKRPMNAFIVWSRDQRRKMALENPRMRNSEISKQLGYQWKMLTEAEKWPFFQEAQKL 116

Query: 102 RLQHMQDYPNYKYRPRRKKQAKRLCKR-----VDPGFLLSSLSRDQNAL 145
           +  H + YPNYKYRPRRK  AK L K       DP  +L S  +  N L
Sbjct: 117 QAMHREKYPNYKYRPRRK--AKMLPKNCSLLPADPASVLCSEVQLDNRL 163


>gi|224967054 SRY (sex determining region Y)-box 6 isoform 4 [Homo
           sapiens]
          Length = 841

 Score =  105 bits (262), Expect = 7e-23
 Identities = 52/119 (43%), Positives = 71/119 (59%), Gaps = 9/119 (7%)

Query: 2   ASLLGAYPWPEGLECPALDAELSDGQSPPAVPRPPGDKGSESRIRRPMNAFMVWAKDERK 61
           A L   Y WP G    A      D +         G   SE  I+RPMNAFMVWAKDER+
Sbjct: 600 AKLQQYYCWPTGGATVAEARVYRDAR---------GRASSEPHIKRPMNAFMVWAKDERR 650

Query: 62  RLAVQNPDLHNAELSKMLGKSWKALTLSQKRPYVDEAERLRLQHMQDYPNYKYRPRRKK 120
           ++    PD+HN+ +SK+LG  WK+++  +K+PY +E  RL   H++ YPNYKY+PR K+
Sbjct: 651 KILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKR 709


>gi|224967050 SRY (sex determining region Y)-box 6 isoform 3 [Homo
           sapiens]
          Length = 801

 Score =  105 bits (262), Expect = 7e-23
 Identities = 52/119 (43%), Positives = 71/119 (59%), Gaps = 9/119 (7%)

Query: 2   ASLLGAYPWPEGLECPALDAELSDGQSPPAVPRPPGDKGSESRIRRPMNAFMVWAKDERK 61
           A L   Y WP G    A      D +         G   SE  I+RPMNAFMVWAKDER+
Sbjct: 560 AKLQQYYCWPTGGATVAEARVYRDAR---------GRASSEPHIKRPMNAFMVWAKDERR 610

Query: 62  RLAVQNPDLHNAELSKMLGKSWKALTLSQKRPYVDEAERLRLQHMQDYPNYKYRPRRKK 120
           ++    PD+HN+ +SK+LG  WK+++  +K+PY +E  RL   H++ YPNYKY+PR K+
Sbjct: 611 KILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKR 669


>gi|70909338 SRY (sex determining region Y)-box 6 isoform 1 [Homo
           sapiens]
          Length = 804

 Score =  105 bits (262), Expect = 7e-23
 Identities = 52/119 (43%), Positives = 71/119 (59%), Gaps = 9/119 (7%)

Query: 2   ASLLGAYPWPEGLECPALDAELSDGQSPPAVPRPPGDKGSESRIRRPMNAFMVWAKDERK 61
           A L   Y WP G    A      D +         G   SE  I+RPMNAFMVWAKDER+
Sbjct: 563 AKLQQYYCWPTGGATVAEARVYRDAR---------GRASSEPHIKRPMNAFMVWAKDERR 613

Query: 62  RLAVQNPDLHNAELSKMLGKSWKALTLSQKRPYVDEAERLRLQHMQDYPNYKYRPRRKK 120
           ++    PD+HN+ +SK+LG  WK+++  +K+PY +E  RL   H++ YPNYKY+PR K+
Sbjct: 614 KILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKR 672


>gi|41406089 SRY-box 13 [Homo sapiens]
          Length = 622

 Score =  105 bits (262), Expect = 7e-23
 Identities = 46/89 (51%), Positives = 66/89 (74%), Gaps = 4/89 (4%)

Query: 41  SESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALTLSQKRPYVDEAER 100
           + S I+RPMNAFMVWAKDER+++    PD+HN+ +SK+LG  WK++T  +K+PY +E  R
Sbjct: 420 NSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQAR 479

Query: 101 LRLQHMQDYPNYKYRPRRKK----QAKRL 125
           L  QH++ YP+YKY+PR K+    + KRL
Sbjct: 480 LSRQHLEKYPDYKYKPRPKRTCIVEGKRL 508


>gi|71037389 SRY (sex determining region Y)-box 6 isoform 2 [Homo
           sapiens]
          Length = 808

 Score =  104 bits (260), Expect = 1e-22
 Identities = 44/84 (52%), Positives = 62/84 (73%)

Query: 37  GDKGSESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALTLSQKRPYVD 96
           G   SE  I+RPMNAFMVWAKDER+++    PD+HN+ +SK+LG  WK+++  +K+PY +
Sbjct: 593 GRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYE 652

Query: 97  EAERLRLQHMQDYPNYKYRPRRKK 120
           E  RL   H++ YPNYKY+PR K+
Sbjct: 653 EQARLSKIHLEKYPNYKYKPRPKR 676


>gi|5902112 SRY (sex determining region Y)-box 30 isoform b [Homo
           sapiens]
          Length = 501

 Score = 92.0 bits (227), Expect = 8e-19
 Identities = 42/104 (40%), Positives = 63/104 (60%)

Query: 20  DAELSDGQSPPAVPRPPGDKGSESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKML 79
           D  L+   S   +P  P  K     ++RPMNAFMVWA+  R  LA  NP  +NAE+S  L
Sbjct: 312 DVPLTVLPSDAGIPDTPFSKDRNGHVKRPMNAFMVWARIHRPALAKANPAANNAEISVQL 371

Query: 80  GKSWKALTLSQKRPYVDEAERLRLQHMQDYPNYKYRPRRKKQAK 123
           G  W  L+  QK+PY DEA++++ +H +++P + Y+PR  K+ +
Sbjct: 372 GLEWNKLSEEQKKPYYDEAQKIKEKHREEFPGWVYQPRPGKRKR 415


>gi|30581117 SRY (sex determining region Y)-box 30 isoform a [Homo
           sapiens]
          Length = 753

 Score = 92.0 bits (227), Expect = 8e-19
 Identities = 42/104 (40%), Positives = 63/104 (60%)

Query: 20  DAELSDGQSPPAVPRPPGDKGSESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKML 79
           D  L+   S   +P  P  K     ++RPMNAFMVWA+  R  LA  NP  +NAE+S  L
Sbjct: 312 DVPLTVLPSDAGIPDTPFSKDRNGHVKRPMNAFMVWARIHRPALAKANPAANNAEISVQL 371

Query: 80  GKSWKALTLSQKRPYVDEAERLRLQHMQDYPNYKYRPRRKKQAK 123
           G  W  L+  QK+PY DEA++++ +H +++P + Y+PR  K+ +
Sbjct: 372 GLEWNKLSEEQKKPYYDEAQKIKEKHREEFPGWVYQPRPGKRKR 415


>gi|112421108 capicua homolog [Homo sapiens]
          Length = 1608

 Score = 63.9 bits (154), Expect = 2e-10
 Identities = 42/149 (28%), Positives = 76/149 (51%), Gaps = 10/149 (6%)

Query: 25  DGQSPPAVPRPPGDKGSESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWK 84
           DG+SP        +K  +  IRRPMNAFM+++K  R  +  ++P+  N  +SK+LG+ W 
Sbjct: 188 DGRSP--------NKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWY 239

Query: 85  ALTLSQKRPYVDEAERLRLQHMQDYPNYKYRPRRKKQAKRLCKRVDPGFLLSSLSRDQNA 144
           AL   +K+ Y D A +++  H + +P++K+  + +K++    K    G         + +
Sbjct: 240 ALGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSEAKPTSLGLAGGHKETRERS 299

Query: 145 LPEKRSGSRGALGEKEDRGEYSPGTALPS 173
           + E  +G+  A G   +    +  T L S
Sbjct: 300 MSE--TGTAAAPGVSSELLSVAAQTLLSS 326


>gi|217035121 HMG-BOX transcription factor BBX isoform 1 [Homo
           sapiens]
          Length = 941

 Score = 61.6 bits (148), Expect = 1e-09
 Identities = 32/94 (34%), Positives = 48/94 (51%)

Query: 38  DKGSESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALTLSQKRPYVDE 97
           D+  E R RRPMNAF+++ K  R  +  ++P L N   +K+L   W  L   +K+ Y D 
Sbjct: 73  DESPEQRARRPMNAFLLFCKRHRSLVRQEHPRLDNRGATKILADWWAVLDPKEKQKYTDM 132

Query: 98  AERLRLQHMQDYPNYKYRPRRKKQAKRLCKRVDP 131
           A+  +   M+  P YK+ P   K  K     V+P
Sbjct: 133 AKEYKDAFMKANPGYKWCPTTNKPVKSPTPTVNP 166


>gi|18378731 HMG-BOX transcription factor BBX isoform 2 [Homo
           sapiens]
          Length = 911

 Score = 61.6 bits (148), Expect = 1e-09
 Identities = 32/94 (34%), Positives = 48/94 (51%)

Query: 38  DKGSESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALTLSQKRPYVDE 97
           D+  E R RRPMNAF+++ K  R  +  ++P L N   +K+L   W  L   +K+ Y D 
Sbjct: 73  DESPEQRARRPMNAFLLFCKRHRSLVRQEHPRLDNRGATKILADWWAVLDPKEKQKYTDM 132

Query: 98  AERLRLQHMQDYPNYKYRPRRKKQAKRLCKRVDP 131
           A+  +   M+  P YK+ P   K  K     V+P
Sbjct: 133 AKEYKDAFMKANPGYKWCPTTNKPVKSPTPTVNP 166


>gi|226371764 transcription factor 7-like 2 isoform 1 [Homo sapiens]
          Length = 602

 Score = 56.6 bits (135), Expect = 4e-08
 Identities = 26/87 (29%), Positives = 51/87 (58%)

Query: 38  DKGSESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALTLSQKRPYVDE 97
           ++  +  I++P+NAFM++ K+ R ++  +     +A ++++LG+ W AL+  ++  Y + 
Sbjct: 343 EEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYEL 402

Query: 98  AERLRLQHMQDYPNYKYRPRRKKQAKR 124
           A + R  HMQ YP +  R    K+ KR
Sbjct: 403 ARKERQLHMQLYPGWSARDNYGKKKKR 429


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.313    0.133    0.414 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,789,228
Number of Sequences: 37866
Number of extensions: 1339169
Number of successful extensions: 6361
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 156
Number of HSP's successfully gapped in prelim test: 400
Number of HSP's that attempted gapping in prelim test: 5593
Number of HSP's gapped (non-prelim): 1232
length of query: 388
length of database: 18,247,518
effective HSP length: 104
effective length of query: 284
effective length of database: 14,309,454
effective search space: 4063884936
effective search space used: 4063884936
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.