Guide to the Human Genome
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Name: SIRT5 Sequence: fasta or formatted (299aa) NCBI GI: 13787215
Description:

sirtuin 5 isoform 2

Referenced in:

Histones, Related Proteins, and Modifying Enzymes

Other entries for this name:
alt prot [310aa] sirtuin 5 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.0         30           2
 C cysteine            3.3         10           1
 D aspartate           2.3          7           1
 E glutamate           6.4         19           2
 F phenylalanine       3.7         11           2
 G glycine             7.7         23           2
 H histidine           3.0          9           1
 I isoleucine          6.0         18           3
 K lysine              5.0         15           1
 L leucine             7.7         23           2
 M methionine          1.7          5           1
 N asparagine          3.3         10           1
 P proline             7.0         21           2
 Q glutamine           3.0          9           1
 R arginine            7.0         21           2
 S serine              7.4         22           3
 T threonine           4.7         14           2
 V valine              7.4         22           3
 W tryptophan          1.3          4           1
 Y tyrosine            2.0          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sirtuin 5 isoform 2 
SIRT5                 0.959   sirtuin 5 isoform 1 
SIRT4                 0.135   sirtuin 4 
SIRT1                 0.113   sirtuin 1 isoform a 
SIRT3                 0.101   sirtuin 3 isoform a 
SIRT3                 0.094   sirtuin 3 isoform b 
SIRT2                 0.073   sirtuin 2 isoform 1 
SIRT2                 0.073   sirtuin 2 isoform 2 
SIRT1                 0.072   sirtuin 1 isoform b 
SIRT6                 0.058   sirtuin 6 
SIRT7                 0.051   sirtuin 7 
LOC100134365          0.010   PREDICTED: similar to ankyrin repeat domain 36 [Hom...
NNT                   0.009   nicotinamide nucleotide transhydrogenase 
NNT                   0.009   nicotinamide nucleotide transhydrogenase 
LOC284297             0.009   hypothetical protein LOC284297 
PYROXD1               0.007   pyridine nucleotide-disulphide oxidoreductase domain...
SALL4                 0.005   sal-like 4 
ZNF205                0.005   zinc finger protein 205 
ZNF205                0.005   zinc finger protein 205 
LOC652147             0.005   PREDICTED: similar to U5 snRNP-specific 200kD prote...
SNRNP200              0.005   activating signal cointegrator 1 complex subunit 3-l...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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