Guide to the Human Genome
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Name: SLC6A9 Sequence: fasta or formatted (652aa) NCBI GI: 67782313
Description:

solute carrier family 6 member 9 isoform 1

Referenced in:

GABA and Glycine
Solute Carrier Families

Other entries for this name:
alt prot [706aa] solute carrier family 6 member 9 isoform 2
alt prot [633aa] solute carrier family 6 member 9 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5         49           3
 C cysteine            2.6         17           1
 D aspartate           3.2         21           2
 E glutamate           2.5         16           2
 F phenylalanine       6.6         43           3
 G glycine             8.7         57           3
 H histidine           1.8         12           1
 I isoleucine          6.9         45           2
 K lysine              2.1         14           2
 L leucine            11.2         73           3
 M methionine          3.1         20           2
 N asparagine          4.0         26           2
 P proline             5.7         37           3
 Q glutamine           3.2         21           1
 R arginine            4.0         26           1
 S serine              6.9         45           2
 T threonine           4.6         30           1
 V valine              7.7         50           2
 W tryptophan          2.5         16           1
 Y tyrosine            5.2         34           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 6 member 9 isoform 1 
SLC6A9                0.970   solute carrier family 6 member 9 isoform 2 
SLC6A9                0.957   solute carrier family 6 member 9 isoform 3 
SLC6A5                0.459   solute carrier family 6 (neurotransmitter transporte...
SLC6A7                0.452   solute carrier family 6, member 7 
SLC6A14               0.378   solute carrier family 6 (amino acid transporter), mem...
SLC6A8                0.374   solute carrier family 6 member 8 isoform 1 
SLC6A1                0.374   solute carrier family 6 (neurotransmitter transport...
SLC6A11               0.373   solute carrier family 6 (neurotransmitter transporter...
SLC6A13               0.370   solute carrier family 6 (neurotransmitter transporte...
SLC6A12               0.363   solute carrier family 6 (neurotransmitter transport...
SLC6A12               0.363   solute carrier family 6 (neurotransmitter transport...
SLC6A12               0.363   solute carrier family 6 (neurotransmitter transport...
SLC6A8                0.361   solute carrier family 6 member 8 isoform 2 
SLC6A4                0.350   solute carrier family 6 member 4 
SLC6A2                0.345   solute carrier family 6 member 2 
SLC6A3                0.343   solute carrier family 6 (neurotransmitter transporter...
SLC6A6                0.337   solute carrier family 6 (neurotransmitter transport...
SLC6A6                0.337   solute carrier family 6 (neurotransmitter transporte...
SLC6A8                0.301   solute carrier family 6 member 8 isoform 3 
SLC6A19               0.278   solute carrier family 6, member 19 
SLC6A18               0.257   solute carrier family 6, member 18 
SLC6A20               0.256   solute carrier family 6, member 20 isoform 1 
SLC6A20               0.210   solute carrier family 6, member 20 isoform 2 
SLC6A17               0.207   solute carrier family 6, member 17 
SLC6A15               0.192   solute carrier family 6, member 15 isoform 1 
SLC6A16               0.150   solute carrier family 6, member 16 
SLC6A15               0.140   solute carrier family 6, member 15 isoform 3 
SLC6A15               0.109   solute carrier family 6, member 15 isoform 2 
SLC6A6                0.104   solute carrier family 6 (neurotransmitter transport...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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