Guide to the Human Genome
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Name: NRP1 Sequence: fasta or formatted (644aa) NCBI GI: 66912178
Description:

neuropilin 1 isoform b

Referenced in:

Additional Genes in Development
Semaphorins

Other entries for this name:
alt prot [923aa] neuropilin 1 isoform a
alt prot [609aa] neuropilin 1 isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.3         28           1
 C cysteine            2.3         15           1
 D aspartate           5.7         37           3
 E glutamate           7.0         45           2
 F phenylalanine       4.8         31           1
 G glycine             9.2         59           2
 H histidine           1.7         11           1
 I isoleucine          7.0         45           3
 K lysine              5.6         36           3
 L leucine             5.9         38           2
 M methionine          2.3         15           1
 N asparagine          4.5         29           3
 P proline             6.8         44           3
 Q glutamine           2.6         17           1
 R arginine            4.8         31           1
 S serine              8.4         54           3
 T threonine           5.9         38           2
 V valine              5.1         33           3
 W tryptophan          1.7         11           1
 Y tyrosine            4.2         27           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   neuropilin 1 isoform b 
NRP1                  0.995   neuropilin 1 isoform a 
NRP1                  0.929   neuropilin 1 isoform c 
NRP2                  0.469   neuropilin 2 isoform 3 precursor 
NRP2                  0.469   neuropilin 2 isoform 5 precursor 
NRP2                  0.469   neuropilin 2 isoform 1 precursor 
NRP2                  0.469   neuropilin 2 isoform 4 precursor 
NRP2                  0.469   neuropilin 2 isoform 2 precursor 
NRP2                  0.425   neuropilin 2 isoform 6 precursor 
MFGE8                 0.109   milk fat globule-EGF factor 8 protein isoform a [Ho...
EDIL3                 0.109   EGF-like repeats and discoidin I-like domains-contai...
F8                    0.102   coagulation factor VIII isoform a precursor 
PCOLCE                0.096   procollagen C-endopeptidase enhancer 
TLL1                  0.089   tolloid-like 1 
PCOLCE2               0.088   procollagen C-endopeptidase enhancer 2 
TLL2                  0.086   tolloid-like 2 
BMP1                  0.086   bone morphogenetic protein 1 isoform 1 precursor [Hom...
BMP1                  0.086   bone morphogenetic protein 1 isoform 2 precursor [Hom...
BMP1                  0.086   bone morphogenetic protein 1 isoform 3 precursor [Hom...
F5                    0.086   coagulation factor V precursor 
DCBLD2                0.086   discoidin, CUB and LCCL domain containing 2 
CUBN                  0.081   cubilin 
CDCP2                 0.080   CUB domain containing protein 2 
MFGE8                 0.068   milk fat globule-EGF factor 8 protein isoform b [Ho...
F8                    0.067   coagulation factor VIII isoform b precursor 
DCBLD1                0.064   discoidin, CUB and LCCL domain containing 1 
NETO1                 0.058   neuropilin- and tolloid-like protein 1 isoform 3 pre...
NETO1                 0.058   neuropilin- and tolloid-like protein 1 isoform 2 pre...
NETO2                 0.058   neuropilin- and tolloid-like protein 2 precursor [Ho...
DDR2                  0.054   discoidin domain receptor family, member 2 precursor...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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