Guide to the Human Genome
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Name: RAB35 Sequence: fasta or formatted (201aa) NCBI GI: 5803135
Description:

RAB35, member RAS oncogene family

Referenced in:

Rab

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5          9           1
 C cysteine            2.5          5           2
 D aspartate           7.0         14           2
 E glutamate           6.5         13           2
 F phenylalanine       4.5          9           1
 G glycine             6.0         12           1
 H histidine           1.5          3           1
 I isoleucine          6.5         13           2
 K lysine              9.0         18           2
 L leucine             7.0         14           3
 M methionine          1.5          3           1
 N asparagine          6.5         13           1
 P proline             0.5          1           1
 Q glutamine           5.5         11           6
 R arginine            6.0         12           1
 S serine              5.0         10           2
 T threonine           7.0         14           2
 V valine              9.5         19           2
 W tryptophan          1.0          2           1
 Y tyrosine            3.0          6           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RAB35, member RAS oncogene family 
RAB1B                 0.491   RAB1B, member RAS oncogene family 
RAB1A                 0.488   RAB1A, member RAS oncogene family isoform 1 
RAB13                 0.462   RAB13, member RAS oncogene family 
LOC100131294          0.449   PREDICTED: similar to RAB13, member RAS oncogene fa...
LOC100131294          0.449   PREDICTED: similar to hCG24991 
LOC100131294          0.449   PREDICTED: similar to hCG24991 
RAB8B                 0.449   RAB8B, member RAS oncogene family 
RAB8A                 0.444   mel transforming oncogene 
RAB10                 0.444   ras-related GTP-binding protein RAB10 
RAB3C                 0.394   RAB3C, member RAS oncogene family 
RAB3B                 0.391   RAB3B, member RAS oncogene family 
RAB3D                 0.391   RAB3D, member RAS oncogene family 
RAB3A                 0.383   RAB3A, member RAS oncogene family 
RAB11A                0.373   Ras-related protein Rab-11A 
RAB26                 0.373   RAB26, member RAS oncogene family 
RAB30                 0.367   RAB30, member RAS oncogene family 
RAB11B                0.365   RAB11B, member RAS oncogene family 
RAB18                 0.365   RAB18, member RAS oncogene family 
RAB33A                0.354   Ras-related protein Rab-33A 
RAB37                 0.349   RAB37, member RAS oncogene family isoform 2 
RAB27B                0.346   RAB27B, member RAS oncogene family 
RAB12                 0.341   RAB12, member RAS oncogene family 
RAB43                 0.339   RAB43 protein 
RAB19                 0.339   RAB19, member RAS oncogene family 
RAB2B                 0.336   RAB2B protein isoform 1 
RAB25                 0.336   RAB25 
RAB37                 0.333   RAB37, member RAS oncogene family isoform 3 
RAB2A                 0.333   RAB2A, member RAS oncogene family 
RAB27A                0.325   Ras-related protein Rab-27A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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