Guide to the Human Genome
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Name: LMAN2 Sequence: fasta or formatted (356aa) NCBI GI: 5803023
Description:

lectin, mannose-binding 2 precursor

Referenced in:

ER, Golgi, and the Secretory Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.7         13           2
 C cysteine            1.7          6           1
 D aspartate           7.3         26           2
 E glutamate           4.5         16           2
 F phenylalanine       4.8         17           1
 G glycine             9.8         35           1
 H histidine           3.4         12           1
 I isoleucine          3.9         14           2
 K lysine              4.8         17           2
 L leucine            10.4         37           5
 M methionine          2.2          8           1
 N asparagine          4.2         15           2
 P proline             5.3         19           1
 Q glutamine           2.0          7           1
 R arginine            6.2         22           2
 S serine              6.5         23           3
 T threonine           6.7         24           2
 V valine              6.5         23           2
 W tryptophan          3.4         12           1
 Y tyrosine            2.8         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   lectin, mannose-binding 2 precursor 
LMAN2L                0.495   lectin, mannose-binding 2-like isoform 2 
LMAN2L                0.488   lectin, mannose-binding 2-like isoform 1 
LMAN1                 0.185   lectin, mannose-binding, 1 precursor 
LMAN1L                0.145   lectin, mannose-binding, 1 like 
MUC16                 0.014   mucin 16 
LOC100293231          0.014   PREDICTED: hypothetical protein, partial 
ATG9B                 0.007   ATG9 autophagy related 9 homolog B 
HFM1                  0.007   HFM1 protein 
SH3BP5L               0.007   SH3-binding domain protein 5-like 
LOC100129094          0.007   PREDICTED: similar to hCG2036765 
LOC100129094          0.007   PREDICTED: similar to hCG2036765 
LOC100129094          0.007   PREDICTED: hypothetical protein LOC100129094 
GTPBP3                0.005   GTP binding protein 3 (mitochondrial) isoform III [...
GTPBP3                0.005   GTP binding protein 3 (mitochondrial) isoform V [Ho...
GTPBP3                0.005   GTP binding protein 3 (mitochondrial) isoform IV [H...
ASTN2                 0.005   astrotactin 2 isoform c 
ASTN2                 0.005   astrotactin 2 isoform b 
ASTN2                 0.005   astrotactin 2 isoform a 
LOC100293922          0.005   PREDICTED: hypothetical protein 
LOC100131426          0.005   PREDICTED: hypothetical protein 
LOC100291358          0.005   PREDICTED: hypothetical protein XP_002347390 
LOC100131426          0.005   PREDICTED: hypothetical protein isoform 2 
LOC100131426          0.005   PREDICTED: hypothetical protein isoform 1 
PAPL                  0.004   iron/zinc purple acid phosphatase-like protein [Hom...
LOC100293867          0.004   PREDICTED: hypothetical protein 
LOC100290553          0.004   PREDICTED: hypothetical protein XP_002347706 
LOC100131426          0.004   PREDICTED: hypothetical protein 
LOC100287282          0.004   PREDICTED: hypothetical protein XP_002344162 
CD46                  0.004   CD46 antigen, complement regulatory protein isoform ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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