Guide to the Human Genome
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Name: ZBTB6 Sequence: fasta or formatted (424aa) NCBI GI: 5730122
Description:

zinc finger and BTB domain containing 6

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.5         15           2
 C cysteine            4.2         18           2
 D aspartate           5.2         22           1
 E glutamate           8.0         34           3
 F phenylalanine       4.0         17           1
 G glycine             4.5         19           1
 H histidine           4.7         20           1
 I isoleucine          4.7         20           2
 K lysine              7.3         31           2
 L leucine            10.6         45           3
 M methionine          2.4         10           1
 N asparagine          4.7         20           3
 P proline             2.4         10           1
 Q glutamine           6.1         26           2
 R arginine            4.2         18           1
 S serine              9.7         41           2
 T threonine           5.7         24           1
 V valine              5.7         24           2
 W tryptophan          0.0          0           0
 Y tyrosine            2.4         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger and BTB domain containing 6 
ZBTB26                0.392   zinc finger and BTB domain containing 26 
ZBTB12                0.255   zinc finger and BTB domain containing 12 
ZBTB37                0.161   zinc finger and BTB domain containing 37 isoform a ...
ZBTB43                0.152   zinc finger and BTB domain containing 43 
ZBTB43                0.152   zinc finger and BTB domain containing 43 
ZBTB34                0.150   zinc finger and BTB domain containing 34 
ZFP161                0.134   zinc finger protein 161 homolog 
ZFP161                0.134   zinc finger protein 161 homolog 
BCL6B                 0.117   B-cell CLL/lymphoma 6, member B (zinc finger protein...
ZBTB17                0.112   zinc finger and BTB domain containing 17 
ZNF131                0.104   zinc finger protein 131 
ZNF236                0.091   zinc finger protein 236 
ZNF517                0.091   zinc finger protein 517 
ZNF189                0.090   zinc finger protein 189 isoform 2 
ZNF189                0.090   zinc finger protein 189 isoform 1 
ZNF658                0.090   zinc finger protein 658 
ZNF146                0.090   zinc finger protein 146 
ZNF146                0.090   zinc finger protein 146 
ZNF146                0.090   zinc finger protein 146 
ZNF333                0.089   zinc finger protein 333 
ZNF33B                0.089   zinc finger protein 33B 
ZNF510                0.089   zinc finger protein 510 
ZNF766                0.089   zinc finger protein 766 
ZNF425                0.087   zinc finger protein 425 
LOC388559             0.086   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.086   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.086   PREDICTED: hypothetical protein LOC388559 
ZNF57                 0.086   zinc finger protein 57 
ZNF776                0.086   zinc finger protein 776 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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