Guide to the Human Genome
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Name: ROR1 Sequence: fasta or formatted (937aa) NCBI GI: 134152725
Description:

receptor tyrosine kinase-like orphan receptor 1 isoform 1

Referenced in:

Receptor Tyrosine Kinases

Other entries for this name:
alt prot [393aa] receptor tyrosine kinase-like orphan receptor 1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         58           3
 C cysteine            3.0         28           1
 D aspartate           3.8         36           1
 E glutamate           5.7         53           2
 F phenylalanine       3.9         37           3
 G glycine             6.2         58           2
 H histidine           3.2         30           2
 I isoleucine          6.1         57           1
 K lysine              4.2         39           1
 L leucine             8.2         77           3
 M methionine          2.8         26           1
 N asparagine          4.8         45           2
 P proline             8.4         79           3
 Q glutamine           4.6         43           2
 R arginine            4.9         46           3
 S serine              9.9         93           3
 T threonine           5.0         47           2
 V valine              4.4         41           2
 W tryptophan          1.1         10           1
 Y tyrosine            3.6         34           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   receptor tyrosine kinase-like orphan receptor 1 iso... 
ROR2                  0.546   receptor tyrosine kinase-like orphan receptor 2 prec...
ROR1                  0.416   receptor tyrosine kinase-like orphan receptor 1 iso...
MUSK                  0.145   skeletal muscle receptor tyrosine kinase 
NTRK2                 0.120   neurotrophic tyrosine kinase, receptor, type 2 isofo...
NTRK2                 0.120   neurotrophic tyrosine kinase, receptor, type 2 isofo...
NTRK1                 0.118   neurotrophic tyrosine kinase, receptor, type 1 isofo...
NTRK1                 0.118   neurotrophic tyrosine kinase, receptor, type 1 isofor...
NTRK1                 0.118   neurotrophic tyrosine kinase, receptor, type 1 isofo...
NTRK3                 0.116   neurotrophic tyrosine kinase, receptor, type 3 isofo...
NTRK3                 0.111   neurotrophic tyrosine kinase, receptor, type 3 isofo...
DDR2                  0.097   discoidin domain receptor family, member 2 precursor...
DDR2                  0.097   discoidin domain receptor family, member 2 precursor...
ALK                   0.097   anaplastic lymphoma kinase 
INSRR                 0.097   insulin receptor-related receptor precursor 
EPHB1                 0.096   ephrin receptor EphB1 precursor 
DDR1                  0.096   discoidin domain receptor family, member 1 isoform b...
DDR1                  0.096   discoidin domain receptor family, member 1 isoform a...
IGF1R                 0.095   insulin-like growth factor 1 receptor precursor [Homo...
EPHA1                 0.094   ephrin receptor EphA1 
PTK2                  0.094   PTK2 protein tyrosine kinase 2 isoform b 
PTK2                  0.094   PTK2 protein tyrosine kinase 2 isoform a 
EPHB4                 0.094   EPH receptor B4 precursor 
DDR1                  0.092   discoidin domain receptor family, member 1 isoform c...
LTK                   0.092   leukocyte receptor tyrosine kinase isoform 1 precurs...
LTK                   0.092   leukocyte receptor tyrosine kinase isoform 2 precurs...
EPHB2                 0.092   ephrin receptor EphB2 isoform 1 precursor 
EPHB2                 0.092   ephrin receptor EphB2 isoform 2 precursor 
FGFR4                 0.092   fibroblast growth factor receptor 4 isoform 2 precur...
FGFR4                 0.092   fibroblast growth factor receptor 4 isoform 1 precur...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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