Guide to the Human Genome
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Name: TACC3 Sequence: fasta or formatted (838aa) NCBI GI: 5454102
Description:

transforming, acidic coiled-coil containing protein 3

Referenced in:

Coiled-Coil Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.2         77           2
 C cysteine            1.8         15           1
 D aspartate           4.9         41           2
 E glutamate          10.9         91           3
 F phenylalanine       2.1         18           1
 G glycine             6.9         58           2
 H histidine           1.9         16           1
 I isoleucine          1.9         16           1
 K lysine              6.4         54           2
 L leucine             8.7         73           2
 M methionine          1.7         14           1
 N asparagine          2.5         21           1
 P proline             8.8         74           3
 Q glutamine           6.0         50           2
 R arginine            4.5         38           2
 S serine              9.3         78           4
 T threonine           5.7         48           2
 V valine              5.4         45           2
 W tryptophan          0.2          2           1
 Y tyrosine            1.1          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transforming, acidic coiled-coil containing protein 3... 
TACC1                 0.131   transforming, acidic coiled-coil containing protein...
TACC1                 0.127   transforming, acidic coiled-coil containing protein...
TACC2                 0.113   transforming, acidic coiled-coil containing protein...
TACC2                 0.113   transforming, acidic coiled-coil containing protein ...
TACC2                 0.113   transforming, acidic coiled-coil containing protein ...
TACC2                 0.113   transforming, acidic coiled-coil containing protein ...
TACC1                 0.112   transforming, acidic coiled-coil containing protein...
TCOF1                 0.023   Treacher Collins-Franceschetti syndrome 1 isoform e...
TCOF1                 0.023   Treacher Collins-Franceschetti syndrome 1 isoform d...
TCOF1                 0.023   Treacher Collins-Franceschetti syndrome 1 isoform a ...
TCOF1                 0.023   Treacher Collins-Franceschetti syndrome 1 isoform c ...
CEP164                0.021   centrosomal protein 164kDa 
LOC727832             0.019   golgi autoantigen, golgin subfamily a-like 
MYH10                 0.019   myosin, heavy polypeptide 10, non-muscle 
CCDC89                0.019   coiled-coil domain containing 89 
NEFH                  0.018   neurofilament, heavy polypeptide 200kDa 
MYO18B                0.018   myosin XVIIIB 
CEP290                0.018   centrosomal protein 290kDa 
KTN1                  0.017   kinectin 1 isoform b 
MYH2                  0.017   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH2                  0.017   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH6                  0.017   myosin heavy chain 6 
GCC2                  0.016   GRIP and coiled-coil domain-containing 2 
MYH7                  0.016   myosin, heavy chain 7, cardiac muscle, beta 
MYH3                  0.016   myosin, heavy chain 3, skeletal muscle, embryonic [H...
MYH1                  0.016   myosin, heavy chain 1, skeletal muscle, adult [Homo...
CCDC19                0.016   nasopharyngeal epithelium specific protein 1 
GOLGB1                0.016   golgi autoantigen, golgin subfamily b, macrogolgin ...
CLIP1                 0.016   restin isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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