Guide to the Human Genome
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Name: DAZ3 Sequence: fasta or formatted (438aa) NCBI GI: 54292110
Description:

deleted in azoospermia 3

Referenced in:

Protein Composition and Structure
Testes and Sperm
Y-linked Genes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5         33           3
 C cysteine            1.1          5           1
 D aspartate           1.4          6           1
 E glutamate           2.3         10           1
 F phenylalanine       5.3         23           1
 G glycine             5.7         25           2
 H histidine           1.4          6           1
 I isoleucine          2.7         12           2
 K lysine              2.5         11           2
 L leucine             3.7         16           2
 M methionine          0.7          3           1
 N asparagine          6.4         28           1
 P proline            12.6         55           5
 Q glutamine          10.3         45           1
 R arginine            3.0         13           2
 S serine              5.5         24           3
 T threonine           6.4         28           2
 V valine             10.0         44           2
 W tryptophan          1.1          5           2
 Y tyrosine           10.5         46           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   deleted in azoospermia 3 
DAZ2                  0.926   deleted in azoospermia 2 isoform 2 
DAZ1                  0.902   deleted in azoospermia 
DAZ4                  0.902   deleted in azoospermia 4 isoform 1 
DAZ2                  0.889   deleted in azoospermia 2 isoform 1 
DAZ4                  0.834   deleted in azoospermia 4 isoform 2 
DAZ2                  0.719   deleted in azoospermia 2 isoform 3 
DAZL                  0.333   deleted in azoospermia-like 
BOLL                  0.080   boule isoform 2 
BOLL                  0.080   boule isoform 1 
RBM9                  0.035   RNA binding motif protein 9 isoform 6 
RBM9                  0.035   RNA binding motif protein 9 isoform 4 
RBM9                  0.035   RNA binding motif protein 9 isoform 3 
RBM9                  0.035   RNA binding motif protein 9 isoform 1 
A2BP1                 0.032   ataxin 2-binding protein 1 isoform 5 
PABPC3                0.032   poly(A) binding protein, cytoplasmic 3 
DAZAP1                0.032   DAZ associated protein 1 isoform b 
RBM9                  0.032   RNA binding motif protein 9 isoform 5 
RBM9                  0.032   RNA binding motif protein 9 isoform 2 
RBMY1F                0.032   RNA binding motif protein, Y-linked, family 1, membe...
RBMY1J                0.032   RNA binding motif protein, Y-linked, family 1, membe...
A2BP1                 0.031   ataxin 2-binding protein 1 isoform 3 
A2BP1                 0.031   ataxin 2-binding protein 1 isoform 2 
A2BP1                 0.031   ataxin 2-binding protein 1 isoform 1 
PABPC1                0.031   poly(A) binding protein, cytoplasmic 1 
RBMXL1                0.031   RNA binding motif protein, X-linked-like 1 
RBMXL1                0.031   RNA binding motif protein, X-linked-like 1 
RBMY1A1               0.031   RNA binding motif protein, Y-linked, family 1, member...
RBMY1E                0.031   RNA binding motif protein, Y-linked, family 1, membe...
RBMY1B                0.031   RNA binding motif protein, Y-linked, family 1, membe...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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