Guide to the Human Genome
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Name: OR8J3 Sequence: fasta or formatted (315aa) NCBI GI: 51854213
Description:

olfactory receptor, family 8, subfamily J, member 3

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         18           2
 C cysteine            3.2         10           1
 D aspartate           2.2          7           1
 E glutamate           2.5          8           1
 F phenylalanine       7.3         23           2
 G glycine             2.9          9           2
 H histidine           1.3          4           1
 I isoleucine          7.6         24           2
 K lysine              3.2         10           3
 L leucine            13.0         41           3
 M methionine          5.4         17           2
 N asparagine          5.4         17           2
 P proline             4.4         14           1
 Q glutamine           1.6          5           1
 R arginine            3.2         10           2
 S serine              9.2         29           2
 T threonine           7.0         22           2
 V valine              9.5         30           3
 W tryptophan          0.0          0           0
 Y tyrosine            5.4         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 8, subfamily J, member 3 ... 
OR8J1                 0.879   olfactory receptor, family 8, subfamily J, member 1 ...
OR8K3                 0.573   olfactory receptor, family 8, subfamily K, member 3 ...
OR5R1                 0.566   olfactory receptor, family 5, subfamily R, member 1 ...
OR8K5                 0.558   olfactory receptor, family 8, subfamily K, member 5...
OR8U8                 0.558   olfactory receptor, family 8, subfamily U, member 8 ...
OR8U1                 0.553   olfactory receptor, family 8, subfamily U, member 1 ...
OR8U9                 0.543   olfactory receptor, family 8, subfamily U, member 9 ...
OR8K1                 0.536   olfactory receptor, family 8, subfamily K, member 1 ...
OR8G1                 0.524   olfactory receptor, family 8, subfamily G, member 1 ...
OR8G5                 0.513   olfactory receptor, family 8, subfamily G, member 5 ...
OR5B12                0.509   olfactory receptor, family 5, subfamily B, member 12...
OR5AS1                0.508   olfactory receptor, family 5, subfamily AS, member 1...
OR8B8                 0.508   olfactory receptor, family 8, subfamily B, member 8 ...
OR8B3                 0.503   olfactory receptor, family 8, subfamily B, member 3 ...
OR8B2                 0.501   olfactory receptor, family 8, subfamily B, member 2 ...
OR5AR1                0.499   olfactory receptor, family 5, subfamily AR, member 1...
OR8D1                 0.492   olfactory receptor, family 8, subfamily D, member 1 ...
OR8A1                 0.487   olfactory receptor, family 8, subfamily A, member 1 ...
OR5I1                 0.486   olfactory receptor, family 5, subfamily I, member 1 [...
OR5M11                0.486   olfactory receptor, family 5, subfamily M, member 11...
OR8B12                0.482   olfactory receptor, family 8, subfamily B, member 12...
OR5D18                0.481   olfactory receptor, family 5, subfamily D, member 18...
OR8D4                 0.479   olfactory receptor, family 8, subfamily D, member 4 ...
OR5B21                0.479   olfactory receptor, family 5, subfamily B, member 21...
OR8D2                 0.479   olfactory receptor, family 8, subfamily D, member 2 ...
OR5L2                 0.477   olfactory receptor, family 5, subfamily L, member 2 ...
OR5AP2                0.472   olfactory receptor, family 5, subfamily AP, member 2...
OR8H1                 0.472   olfactory receptor, family 8, subfamily H, member 1 ...
OR8H3                 0.472   olfactory receptor, family 8, subfamily H, member 3 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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