Search of human proteins with 5031757

Search of human proteins with 5031757

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|5031757 T-cell leukemia homeobox 1 [Homo sapiens]
         (330 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|5031757 T-cell leukemia homeobox 1 [Homo sapiens]                  686   0.0  
gi|50355978 T-cell leukemia homeobox 3 [Homo sapiens]                 336   2e-92
gi|7706621 T-cell leukemia homeobox 2 [Homo sapiens]                  308   3e-84
gi|28912912 NK6 transcription factor related, locus 2 [Homo sapi...    96   6e-20
gi|89257348 homeo box HB9 [Homo sapiens]                               91   1e-18
gi|4557673 pancreatic and duodenal homeobox 1 [Homo sapiens]           89   5e-18
gi|111120318 NK6 transcription factor related, locus 1 [Homo sap...    87   2e-17
gi|116805350 homeo box (H6 family) 1 [Homo sapiens]                    87   2e-17
gi|24497517 homeobox A5 [Homo sapiens]                                 86   5e-17
gi|19923391 homeobox D3 [Homo sapiens]                                 86   6e-17
gi|118582284 msh homeobox 1 [Homo sapiens]                             85   8e-17
gi|23397672 homeobox D4 [Homo sapiens]                                 85   8e-17
gi|70608170 H6 family homeobox 2 [Homo sapiens]                        85   1e-16
gi|7710121 engrailed homeobox 2 [Homo sapiens]                         85   1e-16
gi|14149728 BarH-like homeobox 1 [Homo sapiens]                        84   1e-16
gi|14149611 empty spiracles homeobox 2 [Homo sapiens]                  84   1e-16
gi|94536800 empty spiracles homolog 1 [Homo sapiens]                   84   1e-16
gi|39930383 BarH-like homeobox 2 [Homo sapiens]                        83   4e-16
gi|63054872 ladybird homeobox 1 [Homo sapiens]                         82   5e-16
gi|157743259 H6 family homeobox 3 [Homo sapiens]                       82   7e-16
gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens]                  82   7e-16
gi|13375632 homeobox D1 [Homo sapiens]                                 81   1e-15
gi|239742243 PREDICTED: HPX-153 homeobox [Homo sapiens]                81   1e-15
gi|126090909 engrailed homeobox 1 [Homo sapiens]                       81   1e-15
gi|157426823 NK2 homeobox 4 [Homo sapiens]                             80   2e-15
gi|24497556 homeobox A7 [Homo sapiens]                                 80   3e-15
gi|24497526 homeobox B1 [Homo sapiens]                                 80   3e-15
gi|153218470 BarH-like homeobox 1 [Homo sapiens]                       80   3e-15
gi|24497513 homeobox A3 isoform a [Homo sapiens]                       78   1e-14
gi|13562112 homeobox A3 isoform a [Homo sapiens]                       78   1e-14

>gi|5031757 T-cell leukemia homeobox 1 [Homo sapiens]
          Length = 330

 Score =  686 bits (1769), Expect = 0.0
 Identities = 330/330 (100%), Positives = 330/330 (100%)

Query: 1   MEHLGPHHLHPGHAEPISFGIDQILNSPDQGGCMGPASRLQDGEYGLGCLVGGAYTYGGG 60
           MEHLGPHHLHPGHAEPISFGIDQILNSPDQGGCMGPASRLQDGEYGLGCLVGGAYTYGGG
Sbjct: 1   MEHLGPHHLHPGHAEPISFGIDQILNSPDQGGCMGPASRLQDGEYGLGCLVGGAYTYGGG 60

Query: 61  GSAAATGAGGAGAYGTGGPGGPGGPAGGGGACSMGPLTGSYNVNMALAGGPGPGGGGGSS 120
           GSAAATGAGGAGAYGTGGPGGPGGPAGGGGACSMGPLTGSYNVNMALAGGPGPGGGGGSS
Sbjct: 61  GSAAATGAGGAGAYGTGGPGGPGGPAGGGGACSMGPLTGSYNVNMALAGGPGPGGGGGSS 120

Query: 121 GGAGALSAAGVIRVPAHRPLAGAVAHPQPLATGLPTVPSVPAMPGVNNLTGLTFPWMESN 180
           GGAGALSAAGVIRVPAHRPLAGAVAHPQPLATGLPTVPSVPAMPGVNNLTGLTFPWMESN
Sbjct: 121 GGAGALSAAGVIRVPAHRPLAGAVAHPQPLATGLPTVPSVPAMPGVNNLTGLTFPWMESN 180

Query: 181 RRYTKDRFTGHPYQNRTPPKKKKPRTSFTRLQICELEKRFHRQKYLASAERAALAKALKM 240
           RRYTKDRFTGHPYQNRTPPKKKKPRTSFTRLQICELEKRFHRQKYLASAERAALAKALKM
Sbjct: 181 RRYTKDRFTGHPYQNRTPPKKKKPRTSFTRLQICELEKRFHRQKYLASAERAALAKALKM 240

Query: 241 TDAQVKTWFQNRRTKWRRQTAEEREAERQQANRILLQLQQEAFQKSLAQPLPADPLCVHN 300
           TDAQVKTWFQNRRTKWRRQTAEEREAERQQANRILLQLQQEAFQKSLAQPLPADPLCVHN
Sbjct: 241 TDAQVKTWFQNRRTKWRRQTAEEREAERQQANRILLQLQQEAFQKSLAQPLPADPLCVHN 300

Query: 301 SSLFALQNLQPWSDDSTKITSVTSVASACE 330
           SSLFALQNLQPWSDDSTKITSVTSVASACE
Sbjct: 301 SSLFALQNLQPWSDDSTKITSVTSVASACE 330


>gi|50355978 T-cell leukemia homeobox 3 [Homo sapiens]
          Length = 291

 Score =  336 bits (861), Expect = 2e-92
 Identities = 192/329 (58%), Positives = 217/329 (65%), Gaps = 62/329 (18%)

Query: 11  PGHAEPISFGIDQILNSPDQGGCMGPASRLQDGEYGLGCLVGGAYTYGGGGSAAATGAGG 70
           P   EPISFGIDQILNSPDQ     PA R  DG   LG   G                  
Sbjct: 10  PHPHEPISFGIDQILNSPDQDS--APAPRGPDGASYLGGPPG------------------ 49

Query: 71  AGAYGTGGPGGPGGPAGGGGACSMGPLTGSYNVNMALAGGPGPGGGGGSSGGAGALSAAG 130
               G  G   P  PA   G  +     GSY+VN++LA                    AG
Sbjct: 50  ----GRPGATYPSLPASFAGLGAPFEDAGSYSVNLSLA-------------------PAG 86

Query: 131 VIRVPAHRPLAGAVAHPQPLATGLPTVPSVPAMPGVNNLTGLTFPWMESNRRYTKDRFT- 189
           VIRVPAHRPL GAV  P PL + LP +PSVP    V++L GL FPWMES+RR+ KDRFT 
Sbjct: 87  VIRVPAHRPLPGAV--PPPLPSALPAMPSVPT---VSSLGGLNFPWMESSRRFVKDRFTA 141

Query: 190 -------------GHPYQNRTPPKKKKPRTSFTRLQICELEKRFHRQKYLASAERAALAK 236
                        GHPYQNRTPPK+KKPRTSF+R+QICELEKRFHRQKYLASAERAALAK
Sbjct: 142 AAALTPFTVTRRIGHPYQNRTPPKRKKPRTSFSRVQICELEKRFHRQKYLASAERAALAK 201

Query: 237 ALKMTDAQVKTWFQNRRTKWRRQTAEEREAERQQANRILLQLQQEAFQKSLAQPLPADPL 296
           +LKMTDAQVKTWFQNRRTKWRRQTAEEREAERQQA+R++LQLQ +AFQKSL   +  DPL
Sbjct: 202 SLKMTDAQVKTWFQNRRTKWRRQTAEEREAERQQASRLMLQLQHDAFQKSLNDSIQPDPL 261

Query: 297 CVHNSSLFALQNLQPWSDDSTKITSVTSV 325
           C+HNSSLFALQNLQPW +DS+K+ +VTS+
Sbjct: 262 CLHNSSLFALQNLQPWEEDSSKVPAVTSL 290


>gi|7706621 T-cell leukemia homeobox 2 [Homo sapiens]
          Length = 284

 Score =  308 bits (790), Expect = 3e-84
 Identities = 182/336 (54%), Positives = 207/336 (61%), Gaps = 71/336 (21%)

Query: 4   LGPHHLHPGHAEPISFGIDQILNSPDQGGCMGPASRLQDGEYGLGCLVGGAYTYGGGGSA 63
           LGPH+L   H EPISFGIDQIL+ P+  G                    G    G GG  
Sbjct: 6   LGPHNLP--HHEPISFGIDQILSGPETPG--------------------GGLGLGRGGQ- 42

Query: 64  AATGAGGAGAYGTGGPGGPGGPAGGGGACSMGPLTGSYNVNMALAGGPGPGGGGGSSGGA 123
              G G  GA+     GG  G +G G A S+ PL GS         G GPGG        
Sbjct: 43  ---GHGENGAFS----GGYHGASGYGPAGSLAPLPGS--------SGVGPGG-------- 79

Query: 124 GALSAAGVIRVPAHRPLAGAVAHPQPLATGLPTVPSVPAMPGVNNLTGLTFPWMESNRRY 183
                  VIRVPAHRPL        P A G P VP    + G   L GLTFPWM+S RR+
Sbjct: 80  -------VIRVPAHRPLP-----VPPPAGGAPAVPGPSGLGGAGGLAGLTFPWMDSGRRF 127

Query: 184 TKDRFT------------GHPYQNRTPPKKKKPRTSFTRLQICELEKRFHRQKYLASAER 231
            KDR T            GHPYQNRTPPK+KKPRTSF+R Q+ ELE+RF RQKYLASAER
Sbjct: 128 AKDRLTAALSPFSGTRRIGHPYQNRTPPKRKKPRTSFSRSQVLELERRFLRQKYLASAER 187

Query: 232 AALAKALKMTDAQVKTWFQNRRTKWRRQTAEEREAERQQANRILLQLQQEAFQKSLAQPL 291
           AALAKAL+MTDAQVKTWFQNRRTKWRRQTAEEREAER +A R+LL LQQ+A  + L  PL
Sbjct: 188 AALAKALRMTDAQVKTWFQNRRTKWRRQTAEEREAERHRAGRLLLHLQQDALPRPLRPPL 247

Query: 292 PADPLCVHNSSLFALQNLQPWSDDSTKITSVTSVAS 327
           P DPLC+HNSSLFALQNLQPW++D+ K+ SV+ +AS
Sbjct: 248 PPDPLCLHNSSLFALQNLQPWAEDN-KVASVSGLAS 282


>gi|28912912 NK6 transcription factor related, locus 2 [Homo
           sapiens]
          Length = 277

 Score = 95.5 bits (236), Expect = 6e-20
 Identities = 83/202 (41%), Positives = 102/202 (50%), Gaps = 20/202 (9%)

Query: 74  YGTGGPGGPGGPAGGGGACSMGPLTGSYNVNMALAGGPGPGGGGGSSGGA----GALSAA 129
           Y   GP G   PA GG    + PL   + ++  L G P    GGG  GG     G  S+A
Sbjct: 32  YALQGPAGFKAPALGGLGAQL-PLGTPHGISDIL-GRPVGAAGGGLLGGLPRLNGLASSA 89

Query: 130 GVIRVPAHRPLAGAVAHPQPLATGLPTVPSVPAMPGVNNLTGLTFPWMESNRRYTKDRFT 189
           GV   PA    A A  +P+PLA  LP  P +   PGV  + G   PW +   R       
Sbjct: 90  GVYFGPA---AAVARGYPKPLAE-LPGRPPI-FWPGV--VQGA--PWRDP--RLAGPAPA 138

Query: 190 GHPYQNRTPPKKKKPRTSFTRLQICELEKRFHRQKYLASAERAALAKALKMTDAQVKTWF 249
           G         KKK  R +F+  QI  LEK F + KYLA  ERA LA +L MT++QVK WF
Sbjct: 139 GGVLDK--DGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWF 196

Query: 250 QNRRTKWR-RQTAEEREAERQQ 270
           QNRRTKWR R  AE   A+++Q
Sbjct: 197 QNRRTKWRKRHAAEMASAKKKQ 218


>gi|89257348 homeo box HB9 [Homo sapiens]
          Length = 401

 Score = 90.9 bits (224), Expect = 1e-18
 Identities = 80/232 (34%), Positives = 107/232 (46%), Gaps = 43/232 (18%)

Query: 67  GAGGAGAYGTGGPGGPGGPAGGGGACSMGPLTGSYNVNMALAGGPGPG-GGGGSSGGAGA 125
           GAGG G    GG GGP   A  G A +      +     A AGG   G   GG+ GGAG 
Sbjct: 98  GAGGGGGGTGGGHGGPHHHAHPGAAAAAAAAAAA-----AAAGGLALGLHPGGAQGGAGL 152

Query: 126 LSAAGVIRVPAHRPLAGAVA------HPQPLATGLPTV----PSVPAMP-----GVNNL- 169
            + A +   P +   A A A      HP  L+   P V    P+ PA P     G   L 
Sbjct: 153 PAQAALYGHPVYGYSAAAAAAALAGQHPA-LSYSYPQVQGAHPAHPADPIKLGAGTFQLD 211

Query: 170 -------TGLTFPWMESNRRYTKDRFTGHPYQNRTPPKKKKPRTSFTRLQICELEKRFHR 222
                   G+  P M       +    G         K ++PRT+FT  Q+ ELE +F  
Sbjct: 212 QWLRASTAGMILPKMPDFNSQAQSNLLG---------KCRRPRTAFTSQQLLELEHQFKL 262

Query: 223 QKYLASAERAALAKALKMTDAQVKTWFQNRRTKWRR-QTAEE---REAERQQ 270
            KYL+  +R  +A +L +T+ QVK WFQNRR KW+R + A+E   +EAE+Q+
Sbjct: 263 NKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKRSKKAKEQAAQEAEKQK 314



 Score = 31.6 bits (70), Expect = 1.0
 Identities = 31/91 (34%), Positives = 34/91 (37%), Gaps = 16/91 (17%)

Query: 71  AGAYGTGGPGGPGGPAGG-GGACSMGPL-----------TGSYNVNMALAGG----PGPG 114
           A A GTGG GG GG +GG  G+CS                 S +    LA      P PG
Sbjct: 36  AAASGTGGGGGGGGASGGTSGSCSPASSEPPAAPADRLRAESPSPPRLLAAHCALLPKPG 95

Query: 115 GGGGSSGGAGALSAAGVIRVPAHRPLAGAVA 145
             G   GG G     G     AH   A A A
Sbjct: 96  FLGAGGGGGGTGGGHGGPHHHAHPGAAAAAA 126



 Score = 30.8 bits (68), Expect = 1.7
 Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 3/66 (4%)

Query: 96  PLTGSYNVNMALAGGPGPGGGGGSSGG-AGALSAAG--VIRVPAHRPLAGAVAHPQPLAT 152
           PL    ++  A +G  G GGGGG+SGG +G+ S A       PA R  A + + P+ LA 
Sbjct: 27  PLALVTSLAAAASGTGGGGGGGGASGGTSGSCSPASSEPPAAPADRLRAESPSPPRLLAA 86

Query: 153 GLPTVP 158
               +P
Sbjct: 87  HCALLP 92


>gi|4557673 pancreatic and duodenal homeobox 1 [Homo sapiens]
          Length = 283

 Score = 89.0 bits (219), Expect = 5e-18
 Identities = 56/162 (34%), Positives = 81/162 (50%), Gaps = 9/162 (5%)

Query: 111 PGPGGGGGSSGGAGALSAAGVIRVPAHRPLAGAVAHPQPLATGLPTVPSVP----AMPGV 166
           P PG  G    G+    +   +   A  P    + H  P    LP  P+ P    A PGV
Sbjct: 49  PFPGALGALEQGSPPDISPYEVPPLADDPAVAHLHHHLPAQLALPHPPAGPFPEGAEPGV 108

Query: 167 ---NNLTGLTFPWMESNRRYT-KDRFTGHPYQNRTPPKKKKPRTSFTRLQICELEKRFHR 222
               N   L FPWM+S + +  K ++ G  Y    P + K+ RT++TR Q+ ELEK F  
Sbjct: 109 LEEPNRVQLPFPWMKSTKAHAWKGQWAGGAYAAE-PEENKRTRTAYTRAQLLELEKEFLF 167

Query: 223 QKYLASAERAALAKALKMTDAQVKTWFQNRRTKWRRQTAEER 264
            KY++   R  LA  L +T+  +K WFQNRR KW+++  ++R
Sbjct: 168 NKYISRPRRVELAVMLNLTERHIKIWFQNRRMKWKKEEDKKR 209


>gi|111120318 NK6 transcription factor related, locus 1 [Homo
           sapiens]
          Length = 367

 Score = 87.4 bits (215), Expect = 2e-17
 Identities = 75/255 (29%), Positives = 109/255 (42%), Gaps = 47/255 (18%)

Query: 62  SAAATGAGGAGAYGTGGPGGPGGPAGGGGACSMGP-----LTGSYNVN-------MALAG 109
           S++++ +  +   GT  PGG   PA GG +    P         + +N       M +A 
Sbjct: 52  SSSSSSSSPSPPLGTHNPGGLKPPATGGLSSLGSPPQQLSAATPHGINDILSRPSMPVAS 111

Query: 110 GPG-----PGGGGGSSGGAGALSAAGVIRVPAHRPLAGAVAHPQPLATGLPTVPSV---P 161
           G       P G   SS  + + S+A      A    A A + P  L  GLP   S+   P
Sbjct: 112 GAALPSASPSGSSSSSSSSASASSASAAAAAA-AAAAAAASSPAGLLAGLPRFSSLSPPP 170

Query: 162 AMPGVN----------------------NLTGLTFPWMESNRRYTKDRFTGHPYQNRT-- 197
             PG+                         T + +P +  +  +   R    P+Q     
Sbjct: 171 PPPGLYFSPSAAAVAAVGRYPKPLAELPGRTPIFWPGVMQSPPWRDARLACTPHQGSILL 230

Query: 198 --PPKKKKPRTSFTRLQICELEKRFHRQKYLASAERAALAKALKMTDAQVKTWFQNRRTK 255
               K+K  R +F+  QI  LEK F + KYLA  ERA LA +L MT++QVK WFQNRRTK
Sbjct: 231 DKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTK 290

Query: 256 WRRQTAEEREAERQQ 270
           WR++ A E    +++
Sbjct: 291 WRKKHAAEMATAKKK 305


>gi|116805350 homeo box (H6 family) 1 [Homo sapiens]
          Length = 348

 Score = 87.4 bits (215), Expect = 2e-17
 Identities = 76/221 (34%), Positives = 96/221 (43%), Gaps = 40/221 (18%)

Query: 58  GGGGSAAATGAGGAGAYGTGG--PGGPGGP--AGGGGACSMGPLT-----GSYNVNMALA 108
           G GG A A    G GA G G   P GPG P   G GGA    P       G  + + +  
Sbjct: 76  GPGGEARARALLGPGALGLGPRPPPGPGPPFALGCGGAARWYPRAHGGYGGGLSPDTSDR 135

Query: 109 GGPGPGGGGGSSGGAGALSAA-GVIRVPAHRPLAGAVAHPQPLATGLPTVPSVPAMP--G 165
             P  G   G + GA       G ++  A    A   A     A+ L  VP+       G
Sbjct: 136 DSPETGEEMGRAEGAWPRGPGPGAVQREAAELAARGPAAGTEEASELAEVPAAAGETRGG 195

Query: 166 VNNLTGLTFPWMESNRRYTKDRFTGHPYQNRTPPKKKKPRTSFTRLQICELEKRFHRQKY 225
           V    G                            +KKK RT F+R Q+ +LE  F  ++Y
Sbjct: 196 VGVGGG----------------------------RKKKTRTVFSRSQVFQLESTFDLKRY 227

Query: 226 LASAERAALAKALKMTDAQVKTWFQNRRTKWRRQTAEEREA 266
           L+SAERA LA +L++T+ QVK WFQNRR KW+RQ A E EA
Sbjct: 228 LSSAERAGLAASLQLTETQVKIWFQNRRNKWKRQLAAELEA 268


>gi|24497517 homeobox A5 [Homo sapiens]
          Length = 270

 Score = 85.9 bits (211), Expect = 5e-17
 Identities = 70/232 (30%), Positives = 99/232 (42%), Gaps = 48/232 (20%)

Query: 53  GAYTYGGGGSAAATGAGGAGAYGTG------------GPGGP--GGPAGGGGACSMGPLT 98
           G Y YG  G   + G  G+G +G+G             P  P    PA    +    PL 
Sbjct: 43  GRYGYGYNGMDLSVGRSGSGHFGSGERARSYAASASAAPAEPRYSQPATSTHSPQPDPLP 102

Query: 99  GSYNVNMALAGGPGP----GGGGGSSGGAGALSAAGVIRVPAHRPLAGA--------VAH 146
            S     A+A  PG     GG    S  +GA + AG   + +   +  A         + 
Sbjct: 103 CS-----AVAPSPGSDSHHGGKNSLSNSSGASADAGSTHISSREGVGTASGAEEDAPASS 157

Query: 147 PQPLATGLPTVPSVPAMPGVNNLTGLTFPWMESNRRYTKDRFTGHPYQNRTPPKKKKPRT 206
            Q  A   P+ P+ PA P +       +PWM      + D   G        P+ K+ RT
Sbjct: 158 EQASAQSEPS-PAPPAQPQI-------YPWMRK-LHISHDNIGG--------PEGKRART 200

Query: 207 SFTRLQICELEKRFHRQKYLASAERAALAKALKMTDAQVKTWFQNRRTKWRR 258
           ++TR Q  ELEK FH  +YL    R  +A AL +++ Q+K WFQNRR KW++
Sbjct: 201 AYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKK 252


>gi|19923391 homeobox D3 [Homo sapiens]
          Length = 432

 Score = 85.5 bits (210), Expect = 6e-17
 Identities = 68/237 (28%), Positives = 96/237 (40%), Gaps = 49/237 (20%)

Query: 57  YGGGGSAAATGAGGAGAYGTGGPGGPGGPAGG---------GGACSM---GPLTGSYNVN 104
           +GG G +  T       YG   P  P  P            G ACS+    PL    +  
Sbjct: 29  FGGYGYSKTTDT-----YGYSTPHQPYPPPAAASSLDTDYPGSACSIQSSAPLRAPAHKG 83

Query: 105 MALAGGPGPGGGGGSSGGAGALSAAGVIRVPAHRPLAGAVAHPQPLATGLPTVPSVPAMP 164
             L G     G G S GG G     G         L      PQP        PS P  P
Sbjct: 84  AELNGSCMRPGTGNSQGGGGGSQPPG---------LNSEQQPPQPPPPPPTLPPSSPTNP 134

Query: 165 GVN-----------------NLTGLTFPWMESNRRYTKDRFT----GHPYQNRTPP--KK 201
           G                    ++   FPWM+ +R+ +K + +    G   ++++PP    
Sbjct: 135 GGGVPAKKPKGGPNASSSSATISKQIFPWMKESRQNSKQKNSCATAGESCEDKSPPGPAS 194

Query: 202 KKPRTSFTRLQICELEKRFHRQKYLASAERAALAKALKMTDAQVKTWFQNRRTKWRR 258
           K+ RT++T  Q+ ELEK FH  +YL    R  +A  L +T+ Q+K WFQNRR K+++
Sbjct: 195 KRVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 251


>gi|118582284 msh homeobox 1 [Homo sapiens]
          Length = 303

 Score = 85.1 bits (209), Expect = 8e-17
 Identities = 70/244 (28%), Positives = 100/244 (40%), Gaps = 50/244 (20%)

Query: 58  GGGGSAAATGAGGAGAYGTGGPGGPGGPAGGGGACSMGPLTGSYNVNMALAGGPGPGGGG 117
           GG G A +  A  A A G    G             + P    ++V   +A    PG   
Sbjct: 27  GGAGQAPSAAAATAAAMGADEEGAKP---------KVSPSLLPFSVEALMADHRKPGAKE 77

Query: 118 GSSGGAGALSAAGVIRVPAHRPLAGAVAHPQPLATGLPTVPSVPAMPGVNNLTGLT---- 173
            +   +  + AAG    P   P         P + G P  PS P   G  ++ GL     
Sbjct: 78  SALAPSEGVQAAGGSAQPLGVP---------PGSLGAPDAPSSPRPLGHFSVGGLLKLPE 128

Query: 174 --------------FPWMESNRRYTKDRFTGHPYQNRTPPK--------KKKPRTSFTRL 211
                          PWM+S       RF+  P +  +PP          +KPRT FT  
Sbjct: 129 DALVKAESPEKPERTPWMQS------PRFSPPPARRLSPPACTLRKHKTNRKPRTPFTTA 182

Query: 212 QICELEKRFHRQKYLASAERAALAKALKMTDAQVKTWFQNRRTKWRRQTAEEREAERQQA 271
           Q+  LE++F +++YL+ AERA  + +L +T+ QVK WFQNRR K +R    E E  +  A
Sbjct: 183 QLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKRLQEAELEKLKMAA 242

Query: 272 NRIL 275
             +L
Sbjct: 243 KPML 246


>gi|23397672 homeobox D4 [Homo sapiens]
          Length = 255

 Score = 85.1 bits (209), Expect = 8e-17
 Identities = 68/205 (33%), Positives = 85/205 (41%), Gaps = 36/205 (17%)

Query: 67  GAGGAGAYGTGGPGGPGGPAGGGGACSMG--PLTGSYNVNMALAGGPGPG------GGGG 118
           G  GA  YG G  G    P G       G  P  GS         GPGPG      G G 
Sbjct: 30  GEQGADYYGGGAQGADFQPPGLYPRPDFGEQPFGGS---------GPGPGSALPARGHGQ 80

Query: 119 SSGGAGALSAAGVIRVPAH-----RPLAGAVAHPQPLATGLPTVPSVPAMPGVNNLTGLT 173
             GG G   AA     PA       PL GA A+ Q       + P  P          + 
Sbjct: 81  EPGGPGGHYAAPGEPCPAPPAPPPAPLPGARAYSQ-------SDPKQPPSGTALKQPAVV 133

Query: 174 FPWMESNRRYTKDRFTGHPYQNRTPPKKKKPRTSFTRLQICELEKRFHRQKYLASAERAA 233
           +PWM       K         N T  + K+ RT++TR Q+ ELEK FH  +YL    R  
Sbjct: 134 YPWM-------KKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIE 186

Query: 234 LAKALKMTDAQVKTWFQNRRTKWRR 258
           +A  L +++ Q+K WFQNRR KW++
Sbjct: 187 IAHTLCLSERQIKIWFQNRRMKWKK 211


>gi|70608170 H6 family homeobox 2 [Homo sapiens]
          Length = 273

 Score = 84.7 bits (208), Expect = 1e-16
 Identities = 77/258 (29%), Positives = 103/258 (39%), Gaps = 51/258 (19%)

Query: 75  GTGGPGGPGGPAGGGGACSMGPLTGSYNVNMALAGGPG--PGGGGGSSGGAGALSAAGVI 132
           G+    G G PA GG          S+ +   L GGP   P    G      +LS +   
Sbjct: 2   GSKEDAGKGCPAAGG--------VSSFTIQSILGGGPSEAPREPVGWPARKRSLSVSSEE 53

Query: 133 RVP-------------AHRPLAGAVAHPQPLATGLPTVPSVPAMPGVNNLTGLTF-PWME 178
             P              H P      H  P+       P      G   L    F     
Sbjct: 54  EEPDDGWKAPACFCPDQHGPKEQGPKHHPPIPFPCLGTPKGSGGSGPGGLERTPFLSPSH 113

Query: 179 SNRRYTKDRF--TGHPYQNRTPPK-----------KKKPRTSFTRLQICELEKRFHRQKY 225
           S+ +  K+R    G P      P+           KKK RT F+R Q+ +LE  F  ++Y
Sbjct: 114 SDFKEEKERLLPAGSPSPGSERPRDGGAERQAGAAKKKTRTVFSRSQVYQLESTFDMKRY 173

Query: 226 LASAERAALAKALKMTDAQVKTWFQNRRTKWRRQTAEEREAERQQANRILLQLQQEAFQK 285
           L+S+ERA LA +L++T+ QVKTWFQNRR KW+RQ + E EA                   
Sbjct: 174 LSSSERACLASSLQLTETQVKTWFQNRRNKWKRQLSAELEAAN--------------MAH 219

Query: 286 SLAQPLPADPLCVHNSSL 303
           + AQ L + PL   +SSL
Sbjct: 220 ASAQTLVSMPLVFRDSSL 237


>gi|7710121 engrailed homeobox 2 [Homo sapiens]
          Length = 333

 Score = 84.7 bits (208), Expect = 1e-16
 Identities = 73/219 (33%), Positives = 102/219 (46%), Gaps = 25/219 (11%)

Query: 67  GAGGAGAYGTGGPGGPGGPAGGGGACSMGPLTGSYNVNMAL-------AGGPGPGGG--- 116
           GAGG    G GG GG  G  GGGGA     L GS +            AGGP P  G   
Sbjct: 91  GAGGGRGGGAGGEGGASGAEGGGGAGGSEQLLGSGSREPRQNPPCAPGAGGPLPAAGSDS 150

Query: 117 -GGSSGGAGALSAAGVIRVPAHR--PLAGAVAHPQPLATGLPTVPSVP--AMPGVN-NLT 170
            G   GG+  LS  G  +       PL G++   + L  G  +V S    +  G N    
Sbjct: 151 PGDGEGGSKTLSLHGGAKKGGDPGGPLDGSLK-ARGLGGGDLSVSSDSDSSQAGANLGAQ 209

Query: 171 GLTFPWMESNRRYTKDRFTGHPYQNRTPPKK------KKPRTSFTRLQICELEKRFHRQK 224
            + +P      RY+ DR +  P ++R P KK      K+PRT+FT  Q+  L+  F   +
Sbjct: 210 PMLWPAWVYCTRYS-DRPSSGP-RSRKPKKKNPNKEDKRPRTAFTAEQLQRLKAEFQTNR 267

Query: 225 YLASAERAALAKALKMTDAQVKTWFQNRRTKWRRQTAEE 263
           YL    R +LA+ L + ++Q+K WFQN+R K ++ T  +
Sbjct: 268 YLTEQRRQSLAQELSLNESQIKIWFQNKRAKIKKATGNK 306



 Score = 28.9 bits (63), Expect = 6.6
 Identities = 15/38 (39%), Positives = 17/38 (44%)

Query: 110 GPGPGGGGGSSGGAGALSAAGVIRVPAHRPLAGAVAHP 147
           G G GGGGGSS G         + +PA     G   HP
Sbjct: 26  GGGSGGGGGSSPGEADTGRRRALMLPAVLQAPGNHQHP 63


>gi|14149728 BarH-like homeobox 1 [Homo sapiens]
          Length = 327

 Score = 84.3 bits (207), Expect = 1e-16
 Identities = 41/78 (52%), Positives = 53/78 (67%)

Query: 200 KKKKPRTSFTRLQICELEKRFHRQKYLASAERAALAKALKMTDAQVKTWFQNRRTKWRRQ 259
           K +K RT+FT  Q+ +LE+ F RQKYL+  +R  LA +L +TD QVKTW+QNRRTKW+RQ
Sbjct: 177 KPRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRRTKWKRQ 236

Query: 260 TAEEREAERQQANRILLQ 277
           TA   E   +  N   LQ
Sbjct: 237 TAVGLELLAEAGNYSALQ 254


>gi|14149611 empty spiracles homeobox 2 [Homo sapiens]
          Length = 252

 Score = 84.3 bits (207), Expect = 1e-16
 Identities = 58/177 (32%), Positives = 78/177 (44%), Gaps = 21/177 (11%)

Query: 118 GSSGGAGALSAAGVIRVP--------AHRPLAGAVAHPQP-----LATGLPTVPSV-PAM 163
           G    A A +  GV   P        +H P      HP P      A  LP+  S  P  
Sbjct: 50  GFHSAAAAAAGRGVYSNPDLVFAEAVSHPPNPAVPVHPVPPPHALAAHPLPSSHSPHPLF 109

Query: 164 PGVNNLTGLTFPWMESNRRYTKDRFTGHP-------YQNRTPPKKKKPRTSFTRLQICEL 216
                     +PW+    RY   RF G+          N    K K+ RT+F+  Q+  L
Sbjct: 110 ASQQRDPSTFYPWLIHRYRYLGHRFQGNDTSPESFLLHNALARKPKRIRTAFSPSQLLRL 169

Query: 217 EKRFHRQKYLASAERAALAKALKMTDAQVKTWFQNRRTKWRRQTAEEREAERQQANR 273
           E  F +  Y+  AER  LA +L +T+ QVK WFQNRRTK++RQ  EE  ++ QQ  +
Sbjct: 170 EHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKFKRQKLEEEGSDSQQKKK 226


>gi|94536800 empty spiracles homolog 1 [Homo sapiens]
          Length = 290

 Score = 84.3 bits (207), Expect = 1e-16
 Identities = 69/218 (31%), Positives = 94/218 (43%), Gaps = 30/218 (13%)

Query: 80  GGPGGPAGGGGACS--MGPLTGSYNVNMALAGGPGPGGGGGSS-GGAGALSAAGVIRVPA 136
           GG GG  GGGGA S  +        +       P P     +   G  A +AAG  R   
Sbjct: 53  GGTGGGTGGGGAGSHLLAAAASEEPLRPTALNYPHPSAAEAAFVSGFPAAAAAGAGRSLY 112

Query: 137 HRP---LAGAVAHPQPLATGLPTVPSVPAMP-----GVNNLTGLTF-PWMESNRRYTKDR 187
             P      A+ HP         + + P  P     G  +   L F PW+  NR      
Sbjct: 113 GGPELVFPEAMNHPALTVHPAHQLGASPLQPPHSFFGAQHRDPLHFYPWVLRNR------ 166

Query: 188 FTGHPYQNRTPP------------KKKKPRTSFTRLQICELEKRFHRQKYLASAERAALA 235
           F GH +Q    P            K K+ RT+F+  Q+  LE+ F +  Y+  AER  LA
Sbjct: 167 FFGHRFQASDVPQDGLLLHGPFARKPKRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLA 226

Query: 236 KALKMTDAQVKTWFQNRRTKWRRQTAEEREAERQQANR 273
            +L +++ QVK WFQNRRTK++RQ  EE   E +Q  +
Sbjct: 227 GSLSLSETQVKVWFQNRRTKYKRQKLEEEGPESEQKKK 264


>gi|39930383 BarH-like homeobox 2 [Homo sapiens]
          Length = 387

 Score = 82.8 bits (203), Expect = 4e-16
 Identities = 47/104 (45%), Positives = 61/104 (58%), Gaps = 12/104 (11%)

Query: 178 ESNRRYTKDRFTGHPYQNRTPP----KKKKPRTSFTRLQICELEKRFHRQKYLASAERAA 233
           E +R  T  R         +PP    K +K RT+F+  Q+ +LE+ F RQKYL+  +R  
Sbjct: 213 EGDREITSSR--------ESPPVRAKKPRKARTAFSDHQLNQLERSFERQKYLSVQDRMD 264

Query: 234 LAKALKMTDAQVKTWFQNRRTKWRRQTAEEREAERQQANRILLQ 277
           LA AL +TD QVKTW+QNRRTKW+RQTA   E   +  N   LQ
Sbjct: 265 LAAALNLTDTQVKTWYQNRRTKWKRQTAVGLELLAEAGNYSALQ 308


>gi|63054872 ladybird homeobox 1 [Homo sapiens]
          Length = 281

 Score = 82.4 bits (202), Expect = 5e-16
 Identities = 56/140 (40%), Positives = 78/140 (55%), Gaps = 7/140 (5%)

Query: 140 LAGAVAHPQ---PLATGLPTVPSVPAMPGVNNLTGLTFPWMESNRRYTKDRFTGHPY--Q 194
           LA A  H Q   PLA G   +     +  +  L   TF  +E +     +   G     Q
Sbjct: 60  LAAADKHAQGGLPLA-GRALLSQTSPLCALEELASKTFKGLEVSVLQAAEGRDGMTIFGQ 118

Query: 195 NRTPPKKKKPRTSFTRLQICELEKRFHRQKYLASAERAALAKALKMTDAQVKTWFQNRRT 254
            +TP K++K RT+FT  QI ELEKRF  QKYL+ A+R  +A+ L +T+AQV TWFQNRR 
Sbjct: 119 RQTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRA 178

Query: 255 KWRRQTAEEREAERQQANRI 274
           K +R   EE +A+ + A ++
Sbjct: 179 KLKRD-LEEMKADVESAKKL 197


>gi|157743259 H6 family homeobox 3 [Homo sapiens]
          Length = 357

 Score = 82.0 bits (201), Expect = 7e-16
 Identities = 38/67 (56%), Positives = 50/67 (74%)

Query: 200 KKKKPRTSFTRLQICELEKRFHRQKYLASAERAALAKALKMTDAQVKTWFQNRRTKWRRQ 259
           +KKK RT F+R Q+ +LE  F  ++YL+S+ERA LA +L +T+ QVK WFQNRR KW+RQ
Sbjct: 226 RKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQVKIWFQNRRNKWKRQ 285

Query: 260 TAEEREA 266
            A E EA
Sbjct: 286 LAAELEA 292


>gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens]
          Length = 814

 Score = 82.0 bits (201), Expect = 7e-16
 Identities = 70/223 (31%), Positives = 92/223 (41%), Gaps = 34/223 (15%)

Query: 64  AATGAGGAGAYGTGGP--GGP-----------GGPAGGGGACSMGPLTGSY--------- 101
           A  GAGG GA G   P  G P            G + GGG  S    +G           
Sbjct: 505 ALAGAGGVGAAGAEPPNAGDPFKAGEAETNDTNGYSSGGGGHSPSADSGDEVPDDEDDDE 564

Query: 102 ----NVNMALAGGPGPGGGGG-SSGGAGALSAAGVIRVPAHRPLAGAVAHPQPLATGLPT 156
                   A       GGGGG  + G+G   AA     P       A   P+  +   P 
Sbjct: 565 DEAPETEAARGAEEARGGGGGLGARGSGCQGAAETDASPGATVDEAAAPGPRENSPVAPG 624

Query: 157 VPSVPAMPGVNNLTGLTFPWMESNRRYTKDRFTGHPYQNRTPPKKKKPRTSFTRLQICEL 216
            P   A PG    T    P   +     K + TG   ++  P   ++ RT+FT  Q+  L
Sbjct: 625 PPGGAAAPGGAGTT----PQGTATAAKPKRKRTGSDSKSGKP---RRARTAFTYEQLVAL 677

Query: 217 EKRFHRQKYLASAERAALAKALKMTDAQVKTWFQNRRTKWRRQ 259
           E +F   +YL+  ER  LA +L +T+ QVK WFQNRRTKW++Q
Sbjct: 678 ENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ 720


>gi|13375632 homeobox D1 [Homo sapiens]
          Length = 328

 Score = 81.3 bits (199), Expect = 1e-15
 Identities = 74/231 (32%), Positives = 92/231 (39%), Gaps = 42/231 (18%)

Query: 49  CLVGGAYTYGGGGSAAATGAGGAGAYGTGG----PGGPGGPAGGGGA----------CSM 94
           C + GAY  G   +AAA GA   G  G+G     PG  G  A  GG+             
Sbjct: 85  CTLEGAYEPGAAPAAAAGGAD-YGFLGSGPAYDFPGVLGRAADDGGSHVHYATSAVFSGG 143

Query: 95  GPLTGSYNVNMALAGGPGPGGG---GGSSGGAGALSAAGVIRVPAHRPLAGAVAHPQPLA 151
           G    S  V+ A  G PGP        + G  GA   A         P  G        A
Sbjct: 144 GSFLLSGQVDYAAFGEPGPFPACLKASADGHPGAFQTAS--------PAPGTYPKSVSPA 195

Query: 152 TGLPTVPSVPAMPGVNNLTGLTFPWMESNRRYTKDRFTGHPYQNRTPPKKKKPRTSFTRL 211
           +GLP   S             TF WM+  R  +K    G   +          RT+F+  
Sbjct: 196 SGLPAAFS-------------TFEWMKVKRNASKK---GKLAEYGAASPSSAIRTNFSTK 239

Query: 212 QICELEKRFHRQKYLASAERAALAKALKMTDAQVKTWFQNRRTKWRRQTAE 262
           Q+ ELEK FH  KYL  A R  +A  L + D QVK WFQNRR K +++  E
Sbjct: 240 QLTELEKEFHFNKYLTRARRIEIANCLHLNDTQVKIWFQNRRMKQKKRERE 290


>gi|239742243 PREDICTED: HPX-153 homeobox [Homo sapiens]
          Length = 411

 Score = 81.3 bits (199), Expect = 1e-15
 Identities = 71/226 (31%), Positives = 94/226 (41%), Gaps = 40/226 (17%)

Query: 64  AATGAGGAGAYGTGGP--GGP-----------GGPAGGGGACSMGPLTGSY--------- 101
           A  GAGG GA G   P  G P            G + GGG  S    +G           
Sbjct: 102 ALAGAGGVGAAGAEPPNAGDPFKAGEAETNDTNGYSSGGGGHSPSADSGDEVPDDEDDDE 161

Query: 102 ----NVNMALAGGPGPGGGGG-SSGGAGALSAAGVIRVPAHRPLAGAVAHPQ---PLATG 153
                   A       GGGGG  + G+G   AA     P       A   P+   P+A G
Sbjct: 162 DEAPETEAARGAEEARGGGGGLGARGSGCQGAAETDASPGATVDEAAAPGPRENSPVAQG 221

Query: 154 LPTVPSVPAMPGVNNLTGLTFPWMESNRRYTKDRFTGHPYQNRTPPKKKKPRTSFTRLQI 213
            P   + P   G       T P   +     K + TG   ++  P   ++ RT+FT  Q+
Sbjct: 222 PPGGAAAPGGAG-------TTPQGTATAAKPKRKRTGSDSKSGKP---RRARTAFTYEQL 271

Query: 214 CELEKRFHRQKYLASAERAALAKALKMTDAQVKTWFQNRRTKWRRQ 259
             LE +F   +YL+  ER  LA +L +T+ QVK WFQNRRTKW++Q
Sbjct: 272 VALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ 317


>gi|126090909 engrailed homeobox 1 [Homo sapiens]
          Length = 392

 Score = 80.9 bits (198), Expect = 1e-15
 Identities = 64/207 (30%), Positives = 88/207 (42%), Gaps = 27/207 (13%)

Query: 59  GGGSAAATGAGGAGAYGTGGPGGPGGPAGGGGACSMGPLTGSYNVNMALAGGPGPGGGGG 118
           G    +   A GAGA   G P      A    A +            A A  P   GGGG
Sbjct: 178 GPPDGSQPAAAGAGASKAGNPAAAAAAAAAAVAAAAA----------AAAAKPSDTGGGG 227

Query: 119 SSGGAGALSAAGVIRVPAHRPLAGAVAHPQPLATGLPTVPSVPAMPGVNNLTGLTFPWME 178
           S GGAG+  A G  + P H   A  +      A G P V +    P       L +P   
Sbjct: 228 SGGGAGSPGAQGT-KYPEHGNPAILLMGS---ANGGPVVKTDSQQP-------LVWPAWV 276

Query: 179 SNRRYTKDRFTGHPYQNRTPPKK-----KKPRTSFTRLQICELEKRFHRQKYLASAERAA 233
              RY+ DR +  P   +   KK     K+PRT+FT  Q+  L+  F   +Y+    R  
Sbjct: 277 YCTRYS-DRPSSGPRTRKLKKKKNEKEDKRPRTAFTAEQLQRLKAEFQANRYITEQRRQT 335

Query: 234 LAKALKMTDAQVKTWFQNRRTKWRRQT 260
           LA+ L + ++Q+K WFQN+R K ++ T
Sbjct: 336 LAQELSLNESQIKIWFQNKRAKIKKAT 362


>gi|157426823 NK2 homeobox 4 [Homo sapiens]
          Length = 354

 Score = 80.5 bits (197), Expect = 2e-15
 Identities = 86/301 (28%), Positives = 127/301 (42%), Gaps = 47/301 (15%)

Query: 9   LHPGHAEPISFGIDQILNSPDQGGCMGPASRLQDGEYGLGCLVGGAYTYG----GGGSAA 64
           L P H  P  F +  IL SP +      +  +     GLG  +G A  Y     G  S A
Sbjct: 3   LSPKHTTP--FSVSDIL-SPIEETYKKFSGAMDGAPPGLGAPLGAAAAYRAPPPGPSSQA 59

Query: 65  ATGAGGAGAYGTGGPGGPGGPAGGGGACSMGPLTGSYNVNMALAGGPGPGGGGGSSGGAG 124
           AT AG   ++   G       A    A +      +Y++   ++  P    G   +GG G
Sbjct: 60  ATVAGMQPSHAMAGHNAAAAAAAAAAAAAAA---ATYHMPPGVSQFPHGAMGSYCNGGLG 116

Query: 125 ALSAAGVIRVPAHRP--LAGAV-----AHPQPLATGLPTVPSVPA---MPGVNNLTGLTF 174
            +       +PA+      GA      A+P P  + +       A   + G+ +LTG+  
Sbjct: 117 NMG-----ELPAYTDGMRGGAATGWYGANPDPRYSSISRFMGPSAGVNVAGMGSLTGIAD 171

Query: 175 PWMESNRRYTKDRFTGHPYQNRTPPKKKKPRTSFTRLQICELEKRFHRQKYLASAERAAL 234
                     K     H       P++K+ R  F++ Q+ ELE+RF +QKYL++ ER  L
Sbjct: 172 A--------AKSLGPLHAAAAAAAPRRKR-RVLFSQAQVYELERRFKQQKYLSAPEREHL 222

Query: 235 AKALKMTDAQVKTWFQNRRTKWRRQTAEEREAERQQANRILLQLQQEAFQKSLAQPLPAD 294
           A  + +T  QVK WFQN R K +RQ A+++ A+         QLQQE     L  P P  
Sbjct: 223 ASMIHLTPTQVKIWFQNHRYKMKRQ-AKDKAAQ---------QLQQEG---GLGPPPPPP 269

Query: 295 P 295
           P
Sbjct: 270 P 270


>gi|24497556 homeobox A7 [Homo sapiens]
          Length = 230

 Score = 80.1 bits (196), Expect = 3e-15
 Identities = 58/181 (32%), Positives = 78/181 (43%), Gaps = 27/181 (14%)

Query: 83  GGPAGGGGACSMGPLTGSYNVNMALAGGPGPGGGGGSSGGAGALSAAGVIRVPAHRPLAG 142
           G  AG G   S  P  G YNVN  L   P   G G  +   G L  A        + + G
Sbjct: 39  GYGAGAGAFASTVP--GLYNVNSPLYQSPFASGYGLGADAYGNLPCASY-----DQNIPG 91

Query: 143 AVAHPQPLATGLPTVPSVPAMPGVNNLTGLTFPWMESNRRYTKDRFTGHPYQNRTPPKKK 202
             +    LA G        A+ G        +PWM S                 + P +K
Sbjct: 92  LCS---DLAKGACDKTDEGALHGAAEANFRIYPWMRS-----------------SGPDRK 131

Query: 203 KPRTSFTRLQICELEKRFHRQKYLASAERAALAKALKMTDAQVKTWFQNRRTKWRRQTAE 262
           + R ++TR Q  ELEK FH  +YL    R  +A AL +T+ Q+K WFQNRR KW+++  +
Sbjct: 132 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKD 191

Query: 263 E 263
           E
Sbjct: 192 E 192


>gi|24497526 homeobox B1 [Homo sapiens]
          Length = 301

 Score = 80.1 bits (196), Expect = 3e-15
 Identities = 77/270 (28%), Positives = 106/270 (39%), Gaps = 42/270 (15%)

Query: 10  HPGHAEPISF------GIDQILNSPDQGGCMGPASRLQDGEYG-------LGCLVGGAYT 56
           +  H+ P SF       +D   +    GG +   +  Q+  Y        LG     +  
Sbjct: 22  YSAHSAPTSFPPSSAQAVDSYASEGRYGGGLSSPAFQQNSGYPAQQPPSTLGVPFPSSAP 81

Query: 57  YGGGGSAAATGAGGAGAYGTGGPGGPGG---PAGGGGACSMGPLTGSYNVNMALAGGPGP 113
            G   +A +   G +  Y  G   G GG   P+  G    +G L+  Y      AGG GP
Sbjct: 82  SGYAPAACSPSYGPSQYYPLGQSEGDGGYFHPSSYGA--QLGGLSDGYG-----AGGAGP 134

Query: 114 GGGGGSSGGAGALSAAGVIRVPAHRPLAGAVAHPQPLATGLPTVPSVPAMPGVNNLTGLT 173
           G         G    A     PA+  L       +   T  P+ P+ P        T  T
Sbjct: 135 GPYPPQHPPYGNEQTASF--APAYADLLS-----EDKETPCPSEPNTP--------TART 179

Query: 174 FPWMESNRRYTKDRFTGHPYQNRTPPKKKKPRTSFTRLQICELEKRFHRQKYLASAERAA 233
           F WM+  R   K      P            RT+FT  Q+ ELEK FH  KYL+ A R  
Sbjct: 180 FDWMKVKRNPPKTAKVSEPGLG----SPSGLRTNFTTRQLTELEKEFHFNKYLSRARRVE 235

Query: 234 LAKALKMTDAQVKTWFQNRRTKWRRQTAEE 263
           +A  L++ + QVK WFQNRR K +++  EE
Sbjct: 236 IAATLELNETQVKIWFQNRRMKQKKREREE 265


>gi|153218470 BarH-like homeobox 1 [Homo sapiens]
          Length = 254

 Score = 79.7 bits (195), Expect = 3e-15
 Identities = 65/202 (32%), Positives = 91/202 (45%), Gaps = 31/202 (15%)

Query: 82  PGGPAGGGGACSMGPLTG----------SYNVNMALAGGPGPGGGG--GSSGGAGALSAA 129
           PG P    GA   GP  G          S+ +   L   PGP G     ++  AG L   
Sbjct: 4   PGEP----GAARFGPPEGCADHRPHRYRSFMIEEILTEPPGPKGAAPAAAAAAAGELLKF 59

Query: 130 GVIRVPAHRPLAGAVAHPQPLATGLPTVPSVP------------AMPGVNNLTGLTFPWM 177
           GV  + A RP    +A  +     +   P  P            A PG+    G     +
Sbjct: 60  GVQALLAARPFHSHLAVLKAEQAAVFKFPLAPLGCSGLSSALLAAGPGLPGAAGAPHLPL 119

Query: 178 ESNRRYTKDRFTGHPYQNRTPPKK-KKPRTSFTRLQICELEKRFHRQKYLASAERAALAK 236
           E   R   +     P +  T  KK ++ RT FT LQ+  LEKRF +QKYL++ +R  LA+
Sbjct: 120 ELQLRGKLE--AAGPGEPGTKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAE 177

Query: 237 ALKMTDAQVKTWFQNRRTKWRR 258
           +L ++  QVKTW+QNRR KW++
Sbjct: 178 SLGLSQLQVKTWYQNRRMKWKK 199


>gi|24497513 homeobox A3 isoform a [Homo sapiens]
          Length = 443

 Score = 78.2 bits (191), Expect = 1e-14
 Identities = 46/134 (34%), Positives = 72/134 (53%), Gaps = 11/134 (8%)

Query: 135 PAHRPLAGAVAHPQPLATGLPTVPSVPAMPGVNNLTGLT--FPWMESNRRYTKDRFTGHP 192
           PA  P   + + PQ  A+  PT  +    P +N+ T     FPWM+ +R+ TK + +   
Sbjct: 116 PAAPPPPSSASPPQN-ASNNPTPANAAKSPLLNSPTVAKQIFPWMKESRQNTKQKTSSSS 174

Query: 193 YQ-----NRTPP---KKKKPRTSFTRLQICELEKRFHRQKYLASAERAALAKALKMTDAQ 244
                  +++PP     K+ RT++T  Q+ ELEK FH  +YL    R  +A  L +T+ Q
Sbjct: 175 SGESCAGDKSPPGQASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 234

Query: 245 VKTWFQNRRTKWRR 258
           +K WFQNRR K+++
Sbjct: 235 IKIWFQNRRMKYKK 248


>gi|13562112 homeobox A3 isoform a [Homo sapiens]
          Length = 443

 Score = 78.2 bits (191), Expect = 1e-14
 Identities = 46/134 (34%), Positives = 72/134 (53%), Gaps = 11/134 (8%)

Query: 135 PAHRPLAGAVAHPQPLATGLPTVPSVPAMPGVNNLTGLT--FPWMESNRRYTKDRFTGHP 192
           PA  P   + + PQ  A+  PT  +    P +N+ T     FPWM+ +R+ TK + +   
Sbjct: 116 PAAPPPPSSASPPQN-ASNNPTPANAAKSPLLNSPTVAKQIFPWMKESRQNTKQKTSSSS 174

Query: 193 YQ-----NRTPP---KKKKPRTSFTRLQICELEKRFHRQKYLASAERAALAKALKMTDAQ 244
                  +++PP     K+ RT++T  Q+ ELEK FH  +YL    R  +A  L +T+ Q
Sbjct: 175 SGESCAGDKSPPGQASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 234

Query: 245 VKTWFQNRRTKWRR 258
           +K WFQNRR K+++
Sbjct: 235 IKIWFQNRRMKYKK 248


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.133    0.414 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,632,486
Number of Sequences: 37866
Number of extensions: 1085097
Number of successful extensions: 29115
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 769
Number of HSP's successfully gapped in prelim test: 642
Number of HSP's that attempted gapping in prelim test: 7672
Number of HSP's gapped (non-prelim): 8303
length of query: 330
length of database: 18,247,518
effective HSP length: 103
effective length of query: 227
effective length of database: 14,347,320
effective search space: 3256841640
effective search space used: 3256841640
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.