OCEL1 3151

Name: OCEL1	Sequence: fasta or formatted (264aa)		NCBI GI: 13375756
Description: occludin/ELL domain containing 1		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.0 21 2 C cysteine 1.5 4 1 D aspartate 4.2 11 2 E glutamate 5.7 15 1 F phenylalanine 3.0 8 1 G glycine 7.6 20 1 H histidine 4.2 11 1 I isoleucine 1.5 4 1 K lysine 7.6 20 2 L leucine 8.7 23 2 M methionine 1.5 4 1 N asparagine 0.4 1 1 P proline 14.4 38 4 Q glutamine 6.8 18 1 R arginine 9.1 24 2 S serine 6.4 17 2 T threonine 3.4 9 1 V valine 3.4 9 1 W tryptophan 0.4 1 1 Y tyrosine 2.3 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 occludin/ELL domain containing 1 MARVELD2 0.177 MARVEL domain containing 2 isoform 1 ELL 0.066 elongation factor RNA polymerase II ELL2 0.064 elongation factor, RNA polymerase II, 2 ELL3 0.057 elongation factor RNA polymerase II-like 3 OCLN 0.043 occludin FMNL1 0.042 formin-like 1 PRB1 0.040 proline-rich protein BstNI subfamily 1 isoform 1 pre... PRB2 0.040 proline-rich protein BstNI subfamily 2 SYNJ1 0.036 synaptojanin 1 isoform c GGN 0.036 gametogenetin SF3B4 0.034 splicing factor 3b, subunit 4 LOC100131102 0.032 PREDICTED: hypothetical protein WIPF2 0.032 WIRE protein RAB11FIP3 0.030 rab11-family interacting protein 3 isoform 1 SYN3 0.030 synapsin III isoform IIIg SYN3 0.030 synapsin III isoform IIIa ARHGAP17 0.030 nadrin isoform 1 ARHGAP17 0.030 nadrin isoform 2 CD2 0.030 CD2 molecule MICALCL 0.028 MICAL C-terminal like LOC100131102 0.028 PREDICTED: hypothetical protein SAMD1 0.028 sterile alpha motif domain containing 1 SYNJ1 0.028 synaptojanin 1 isoform a SYNJ1 0.028 synaptojanin 1 isoform b LOC100131102 0.028 PREDICTED: hypothetical protein TAF4 0.028 TBP-associated factor 4 COL27A1 0.028 collagen, type XXVII, alpha 1 SRCAP 0.028 Snf2-related CBP activator protein CASKIN1 0.026 CASK interacting protein 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.